Cow genome map
| Conread name: | rpigcb_17669.y1 |
| Conread position: | 1-370 |
| Cow position: | chr8:48406628-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-468 |
| Cow position: | chr8:45201516-45201983 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-470 |
| Cow position: | chr8:48407216-48406746 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 1-495 |
| Cow position: | chr8:48406964-48406470 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 312 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 1-503 |
| Cow position: | chr8:48407384-48406882 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 1-508 |
| Cow position: | chr8:46816795-46817302 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 1-510 |
| Cow position: | chr8:55581152-55581661 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 1-512 |
| Cow position: | chr8:45201180-45201691 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 314 |
| Conread position: | 1-512 |
| Cow position: | chr8:45201264-45201775 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 139 |
| Conread position: | 1-512 |
| Cow position: | chr8:45201348-45201859 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 322 |
| Conread position: | 1-512 |
| Cow position: | chr8:46816291-46816802 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 54 |
| Conread position: | 1-512 |
| Cow position: | chr8:46816375-46816886 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 406 |
| Conread position: | 1-512 |
| Cow position: | chr8:46816543-46817054 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 233 |
| Conread position: | 1-512 |
| Cow position: | chr8:46816711-46817222 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 1-512 |
| Cow position: | chr8:48407552-48407041 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 1-512 |
| Cow position: | chr8:55581068-55581579 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 61 |
| Conread position: | 1-513 |
| Cow position: | chr8:55581236-55581748 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 227, 208 |
| Conread position: | 1-514 |
| Cow position: | chr8:45201096-45201609 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 58 |
| Conread position: | 1-514 |
| Cow position: | chr8:45201432-45201944 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 115 |
| Conread position: | 1-514 |
| Cow position: | chr8:46816123-46816636 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 1-514 |
| Cow position: | chr8:48406880-48406367 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 1-514 |
| Cow position: | chr8:55580816-55581329 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 300 |
| Conread position: | 1-514 |
| Cow position: | chr8:55580900-55581413 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 1-515 |
| Cow position: | chr8:46815868-46816385 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 319 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 69, 54 |
| Conread position: | 1-515 |
| Cow position: | chr8:46816459-46816973 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 1-515 |
| Cow position: | chr8:46816879-46817392 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 322 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 1-515 |
| Cow position: | chr8:48407048-48406534 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 1-520 |
| Cow position: | chr8:48407300-48406781 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-520 |
| Cow position: | chr8:48407468-48406949 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-504 |
| Cow position: | chr8:55580986-55581487 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 478, 464 |
| Conread position: | 4-512 |
| Cow position: | chr8:46816630-46817138 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 144 |
| Conread position: | 4-514 |
| Cow position: | chr8:45201017-45201525 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 20 |
| Conread position: | 5-511 |
| Cow position: | chr8:48406792-48406287 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 6-515 |
| Cow position: | chr8:48407631-48407122 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 449, 461 |
| Conread position: | 8-512 |
| Cow position: | chr8:46815962-46816466 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 307 |
| Conread position: | 10-504 |
| Cow position: | chr8:45200937-45201431 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 70-515 |
| Cow position: | chr8:46816108-46816553 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 200 |
| Conread position: | 97-515 |
| Cow position: | chr8:45200940-45201358 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 204, 211 |
| Conread position: | 114-353 |
| Cow position: | chr8:6958057-6957818 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-515 |
| Cow position: | chr8:6958063-6957741 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 118, 125 |
| Conread position: | 197-514 |
| Cow position: | chr8:55580760-55581077 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 13 |
Show alignments to all cow chromosomes.