Cow genome map
| Conread name: | rpigcb_17669.y1 |
| Conread position: | 1-287 |
| Cow position: | chrX:14181228-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-344 |
| Cow position: | chrX:29045014-29044671 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-431 |
| Cow position: | chrX:25310136-25310566 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 1-438 |
| Cow position: | chrX:29045098-29044661 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-476 |
| Cow position: | chrX:25324669-25324198 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 102, 113 |
| Conread position: | 1-483 |
| Cow position: | chrX:13826702-13826220 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 273, 269 |
| Conread position: | 1-504 |
| Cow position: | chrX:25309716-25310219 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 316 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 1-512 |
| Cow position: | chrX:25309884-25310395 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 319 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 1-512 |
| Cow position: | chrX:25325005-25324494 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 1-512 |
| Cow position: | chrX:25325089-25324578 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 1-512 |
| Cow position: | chrX:25325425-25324914 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 318 |
| Conread position: | 1-512 |
| Cow position: | chrX:25325509-25324998 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 1-514 |
| Cow position: | chrX:25309968-25310481 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 126, 143 |
| Conread position: | 1-514 |
| Cow position: | chrX:25324753-25324240 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 311 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 134, 139 |
| Conread position: | 1-514 |
| Cow position: | chrX:25325257-25324744 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 154 |
| Conread position: | 1-514 |
| Cow position: | chrX:25325761-25325248 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 314 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 134, 156 |
| Conread position: | 1-515 |
| Cow position: | chrX:25324921-25324407 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 323 |
| Conread position: | 1-515 |
| Cow position: | chrX:25325341-25324827 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 1-520 |
| Cow position: | chrX:25325173-25324654 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 314 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 3-298 |
| Cow position: | chrX:29045747-29045452 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 137 |
| Conread position: | 3-491 |
| Cow position: | chrX:13826868-13826380 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-371 |
| Cow position: | chrX:14181309-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 46 |
| Conread position: | 5-514 |
| Cow position: | chrX:25325589-25325080 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 305 |
| Conread position: | 13-392 |
| Cow position: | chrX:14181383-14181005 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 226, 5 |
| Conread position: | 20-514 |
| Cow position: | chrX:29045331-29044837 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-512 |
| Cow position: | chrX:25325817-25325334 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 31-466 |
| Cow position: | chrX:13826924-13826489 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 99, 115 |
| Conread position: | 61-380 |
| Cow position: | chrX:29045773-29045455 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 178, 171 |
| Conread position: | 61-518 |
| Cow position: | chrX:13826726-13826270 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 279 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 63-513 |
| Cow position: | chrX:29045857-29045405 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 6, 82 |
| Conread position: | 66-496 |
| Cow position: | chrX:14181416-14180985 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 69-514 |
| Cow position: | chrX:25325609-25325164 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-512 |
| Cow position: | chrX:29045113-29044671 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 70-512 |
| Cow position: | chrX:29045197-29044755 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 323 |
| Conread position: | 82-408 |
| Cow position: | chrX:13826537-13826211 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 82-464 |
| Cow position: | chrX:25309713-25310095 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 220, 233 |
| Conread position: | 102-515 |
| Cow position: | chrX:29045333-29044920 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 154-514 |
| Cow position: | chrX:25325776-25325416 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 86 |
| Conread position: | 166-503 |
| Cow position: | chrX:25309713-25310050 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 222, 205 |
| Conread position: | 250-515 |
| Cow position: | chrX:25309713-25309978 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.