Cow genome map
| Conread name: | rpigcb_17958.y1 |
| Conread position: | 1-343 |
| Cow position: | chr10:61312508-61312857 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 1-363 |
| Cow position: | chr10:24297488-24297109 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 1-441 |
| Cow position: | chr10:17492397-17491923 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 140 |
| Conread position: | 1-500 |
| Cow position: | chr10:1662952-1662430 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 1-604 |
| Cow position: | chr10:2117427-2116788 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 132 |
| Conread position: | 1-624 |
| Cow position: | chr10:8459242-8459904 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 1-633 |
| Cow position: | chr10:55096078-55096749 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr10:7895432-7894755 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr10:19842686-19843364 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr10:25563539-25562864 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr10:32703777-32704455 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-636 |
| Cow position: | chr10:33556642-33555971 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 1-636 |
| Cow position: | chr10:41570119-41570793 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr10:50451572-50452245 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-641 |
| Cow position: | chr10:11110299-11110947 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 1-641 |
| Cow position: | chr10:21489953-21490622 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 1-641 |
| Cow position: | chr10:37041020-37041693 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-641 |
| Cow position: | chr10:39441185-39441861 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-641 |
| Cow position: | chr10:42643561-42644234 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 1-641 |
| Cow position: | chr10:46225847-46226518 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 128 |
| Conread position: | 1-641 |
| Cow position: | chr10:62405756-62405098 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 2-640 |
| Cow position: | chr10:31526726-31527390 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 137 |
| Conread position: | 2-641 |
| Cow position: | chr10:19514246-19514906 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 129 |
| Conread position: | 2-641 |
| Cow position: | chr10:31375396-31374722 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 3-517 |
| Cow position: | chr10:40736704-40737238 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 136 |
| Conread position: | 4-492 |
| Cow position: | chr10:24293973-24293487 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 4-584 |
| Cow position: | chr10:20734476-20735064 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 4-641 |
| Cow position: | chr10:7279083-7278407 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 5-494 |
| Cow position: | chr10:8219526-8220040 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 132 |
| Conread position: | 5-526 |
| Cow position: | chr10:29106795-29106256 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 99 |
| Conread position: | 8-590 |
| Cow position: | chr10:21710219-21709594 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 130 |
| Conread position: | 8-635 |
| Cow position: | chr10:63954527-63955185 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 12-641 |
| Cow position: | chr10:11623696-11623031 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 113 |
| Conread position: | 25-292 |
| Cow position: | chr10:41405415-41405686 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 113 |
| Conread position: | 25-487 |
| Cow position: | chr10:59174005-59173540 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 41 |
| Conread position: | 29-630 |
| Cow position: | chr10:64347014-64347647 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 103 |
| Conread position: | 33-634 |
| Cow position: | chr10:54928870-54928249 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 324 |
| Conread position: | 44-623 |
| Cow position: | chr10:20388740-20388147 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 17 |
| Conread position: | 46-637 |
| Cow position: | chr10:326159-326783 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 57-435 |
| Cow position: | chr10:24757199-24757598 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 60-636 |
| Cow position: | chr10:66496324-66495709 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 64-633 |
| Cow position: | chr10:2516123-2516722 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 64-637 |
| Cow position: | chr10:48385143-48384543 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 84-510 |
| Cow position: | chr10:28339434-28339885 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 137-508 |
| Cow position: | chr10:19295635-19295243 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 277 |
| Conread position: | 140-510 |
| Cow position: | chr10:69935940-69935560 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 49 |
| Conread position: | 167-641 |
| Cow position: | chr10:25005451-25005954 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 249 |
| Conread position: | 179-511 |
| Cow position: | chr10:14904411-14904765 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 238 |
| Conread position: | 194-464 |
| Cow position: | chr10:67580578-67580294 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 98, 229 |
| Conread position: | 204-641 |
| Cow position: | chr10:44866096-44866572 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 75 |
| Conread position: | 212-641 |
| Cow position: | chr10:19894240-19894694 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 198 |
| Conread position: | 230-588 |
| Cow position: | chr10:39775334-39774955 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 188 |
| Conread position: | 290-517 |
| Cow position: | chr10:31636986-31637219 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 119 |
| Conread position: | 290-636 |
| Cow position: | chr10:43289058-43288682 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 112 |
| Conread position: | 290-641 |
| Cow position: | chr10:9799197-9798820 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 125 |
| Conread position: | 292-637 |
| Cow position: | chr10:31182848-31182487 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 108 |
Show alignments to all cow chromosomes.