Cow genome map
| Conread name: | rpigcb_17958.y1 |
| Conread position: | 1-290 |
| Cow position: | chr11:14650423-14650717 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 124 |
| Conread position: | 1-333 |
| Cow position: | chr11:24395987-24396333 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 132 |
| Conread position: | 1-343 |
| Cow position: | chr11:29616642-29616297 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 1-343 |
| Cow position: | chr11:81577250-81576898 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 1-518 |
| Cow position: | chr11:74928453-74928995 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 1-628 |
| Cow position: | chr11:10093534-10094187 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 1-633 |
| Cow position: | chr11:33000535-33001200 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 1-635 |
| Cow position: | chr11:36930869-36930204 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 134 |
| Conread position: | 1-636 |
| Cow position: | chr11:17548811-17549489 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr11:28227126-28226447 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr11:67920679-67920011 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr11:84966767-84967439 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-637 |
| Cow position: | chr11:48168414-48167754 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 1-641 |
| Cow position: | chr11:14260305-14259630 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 124 |
| Conread position: | 1-641 |
| Cow position: | chr11:43511318-43510639 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-641 |
| Cow position: | chr11:44106329-44107014 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 427 |
| Conread position: | 1-641 |
| Cow position: | chr11:44254727-44255407 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-641 |
| Cow position: | chr11:85391192-85390527 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 46 |
| Conread position: | 2-381 |
| Cow position: | chr11:41177583-41177980 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 2-499 |
| Cow position: | chr11:30201038-30200519 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 2-518 |
| Cow position: | chr11:83284550-83285080 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 2-519 |
| Cow position: | chr11:66731797-66732323 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 53 |
| Conread position: | 2-641 |
| Cow position: | chr11:4053662-4053026 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 135 |
| Conread position: | 8-343 |
| Cow position: | chr11:42372463-42372792 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 10-313 |
| Cow position: | chr11:39806361-39806651 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 207, 35 |
| Conread position: | 23-512 |
| Cow position: | chr11:17980616-17980102 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 25-509 |
| Cow position: | chr11:17279895-17279417 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 26-637 |
| Cow position: | chr11:62791573-62792226 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 29-637 |
| Cow position: | chr11:13087986-13087335 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 103 |
| Conread position: | 36-637 |
| Cow position: | chr11:25335828-25336468 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 57-641 |
| Cow position: | chr11:43362000-43361403 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 74-511 |
| Cow position: | chr11:9154166-9153715 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 94-641 |
| Cow position: | chr11:27938361-27938928 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 111-632 |
| Cow position: | chr11:17782259-17781716 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 14 |
| Conread position: | 136-510 |
| Cow position: | chr11:4675823-4675442 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 265 |
| Conread position: | 145-641 |
| Cow position: | chr11:80591161-80591693 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 267 |
| Conread position: | 149-518 |
| Cow position: | chr11:18105881-18105486 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 275 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 110, 47 |
| Conread position: | 165-466 |
| Cow position: | chr11:87155177-87154863 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 51 |
| Conread position: | 166-584 |
| Cow position: | chr11:23883169-23883626 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 252 |
| Conread position: | 167-518 |
| Cow position: | chr11:17832370-17832009 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 113 |
| Conread position: | 169-420 |
| Cow position: | chr11:81317051-81316780 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 98, 254 |
| Conread position: | 173-581 |
| Cow position: | chr11:52515353-52515774 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 228 |
| Conread position: | 205-641 |
| Cow position: | chr11:68130272-68130725 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 204 |
| Conread position: | 207-641 |
| Cow position: | chr11:3999627-3999183 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 120 |
| Conread position: | 290-635 |
| Cow position: | chr11:53772640-53772994 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 106 |
| Conread position: | 290-636 |
| Cow position: | chr11:75256148-75256521 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 116 |
Show alignments to all cow chromosomes.