Cow genome map
Conread name: | rpigcb_17958.y1 |
Conread position: | 1-291 |
Cow position: | chr14:46375911-46376202 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 35 |
Conread position: | 1-343 |
Cow position: | chr14:46123717-46124065 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 122 |
Conread position: | 1-363 |
Cow position: | chr14:45789576-45789952 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 11 |
Conread position: | 1-398 |
Cow position: | chr14:17757441-17757022 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 136 |
Conread position: | 1-444 |
Cow position: | chr14:16917128-16916657 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 130 |
Conread position: | 1-584 |
Cow position: | chr14:46302503-46303129 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-604 |
Cow position: | chr14:44554458-44555084 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 73 |
Conread position: | 1-636 |
Cow position: | chr14:2288851-2289523 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-637 |
Cow position: | chr14:41478347-41479016 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-639 |
Cow position: | chr14:9047436-9048111 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-640 |
Cow position: | chr14:40476101-40475441 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 35 |
Conread position: | 1-641 |
Cow position: | chr14:12902927-12903614 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 136 |
Conread position: | 1-641 |
Cow position: | chr14:13769693-13769015 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 132 |
Conread position: | 1-641 |
Cow position: | chr14:15272663-15271984 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 128 |
Conread position: | 1-641 |
Cow position: | chr14:21200519-21201197 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 139 |
Conread position: | 1-641 |
Cow position: | chr14:27040785-27040105 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-641 |
Cow position: | chr14:32449567-32450236 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-641 |
Cow position: | chr14:32584427-32583754 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-641 |
Cow position: | chr14:45739722-45739049 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 122 |
Conread position: | 1-641 |
Cow position: | chr14:48251850-48251175 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 516 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 20 |
Conread position: | 1-641 |
Cow position: | chr14:50113965-50114622 (view UCSC Genome Browser custom track) |
Alignm length: | 671 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 2-636 |
Cow position: | chr14:50136871-50137544 (view UCSC Genome Browser custom track) |
Alignm length: | 678 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 136 |
Conread position: | 3-641 |
Cow position: | chr14:48494846-48495511 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 42 |
Conread position: | 5-328 |
Cow position: | chr14:46488772-46489101 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 133 |
Conread position: | 6-619 |
Cow position: | chr14:35497147-35497747 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 76 |
Conread position: | 8-636 |
Cow position: | chr14:13369832-13370498 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 130 |
Conread position: | 12-636 |
Cow position: | chr14:30476732-30476068 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 121 |
Conread position: | 12-637 |
Cow position: | chr14:11462471-11461802 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 126 |
Conread position: | 15-292 |
Cow position: | chr14:40345140-40345410 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 63 |
Conread position: | 26-641 |
Cow position: | chr14:30665303-30664643 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 106 |
Conread position: | 77-343 |
Cow position: | chr14:20773843-20774119 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 58 |
Conread position: | 126-641 |
Cow position: | chr14:12833579-12834130 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 53 |
Conread position: | 137-632 |
Cow position: | chr14:44382018-44382550 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 98 |
Conread position: | 175-641 |
Cow position: | chr14:28796801-28796306 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 230 |
Conread position: | 185-333 |
Cow position: | chr14:38380682-38380524 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 226-606 |
Cow position: | chr14:47873297-47872878 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 192 |
Conread position: | 246-637 |
Cow position: | chr14:17219170-17219593 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 164 |
Conread position: | 258-637 |
Cow position: | chr14:23215075-23215479 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 33 |
Conread position: | 290-641 |
Cow position: | chr14:18496888-18497266 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 110 |
Show alignments to all cow chromosomes.