Cow genome map
| Conread name: | rpigcb_17958.y1 |
| Conread position: | 1-342 |
| Cow position: | chr2:44230264-44229909 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 200 |
| Conread position: | 1-343 |
| Cow position: | chr2:40249103-40249477 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-496 |
| Cow position: | chr2:5916775-5917286 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 138 |
| Conread position: | 1-511 |
| Cow position: | chr2:981475-982026 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 215 |
| Conread position: | 1-511 |
| Cow position: | chr2:49301534-49301000 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 122 |
| Conread position: | 1-514 |
| Cow position: | chr2:72692265-72692806 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-518 |
| Cow position: | chr2:72542324-72542835 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 1-589 |
| Cow position: | chr2:59411266-59410638 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 1-610 |
| Cow position: | chr2:13005808-13006449 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 24 |
| Conread position: | 1-616 |
| Cow position: | chr2:6882789-6883415 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 1-628 |
| Cow position: | chr2:16318925-16319589 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 36 |
| Conread position: | 1-628 |
| Cow position: | chr2:16324169-16324807 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 133 |
| Conread position: | 1-636 |
| Cow position: | chr2:2181783-2181110 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 137 |
| Conread position: | 1-636 |
| Cow position: | chr2:3668548-3669225 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr2:8529173-8529836 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 1-636 |
| Cow position: | chr2:9714157-9714826 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 1-636 |
| Cow position: | chr2:16327436-16326769 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr2:29956583-29955920 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr2:52621263-52621940 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 137 |
| Conread position: | 1-636 |
| Cow position: | chr2:53542427-53543104 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 1-636 |
| Cow position: | chr2:54739972-54740632 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr2:74238176-74237500 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr2:80162518-80161855 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-637 |
| Cow position: | chr2:778953-778288 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 38 |
| Conread position: | 1-637 |
| Cow position: | chr2:4018095-4017453 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 53 |
| Conread position: | 1-637 |
| Cow position: | chr2:37324373-37325050 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-637 |
| Cow position: | chr2:62734663-62735335 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 96 |
| Conread position: | 1-637 |
| Cow position: | chr2:67188349-67187687 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-637 |
| Cow position: | chr2:77468699-77468050 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 1-639 |
| Cow position: | chr2:44188929-44189573 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-639 |
| Cow position: | chr2:57937885-57938563 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 9 |
| Conread position: | 1-640 |
| Cow position: | chr2:73992211-73992883 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 132 |
| Conread position: | 1-641 |
| Cow position: | chr2:12595465-12596108 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 51 |
| Conread position: | 1-641 |
| Cow position: | chr2:16330682-16331350 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 138 |
| Conread position: | 1-641 |
| Cow position: | chr2:45937240-45936576 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 137 |
| Conread position: | 1-641 |
| Cow position: | chr2:52128833-52128167 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-641 |
| Cow position: | chr2:53556653-53557334 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 1-641 |
| Cow position: | chr2:70499139-70498470 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 115 |
| Conread position: | 2-432 |
| Cow position: | chr2:10468085-10468534 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 130 |
| Conread position: | 2-640 |
| Cow position: | chr2:32658948-32659599 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 141 |
| Conread position: | 4-641 |
| Cow position: | chr2:41156666-41157343 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 88 |
| Conread position: | 7-641 |
| Cow position: | chr2:12285699-12286364 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 125 |
| Conread position: | 9-641 |
| Cow position: | chr2:7905436-7906101 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 127 |
| Conread position: | 24-555 |
| Cow position: | chr2:25023620-25024193 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 114 |
| Conread position: | 26-598 |
| Cow position: | chr2:15060449-15059877 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 92 |
| Conread position: | 37-641 |
| Cow position: | chr2:44476963-44476319 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 38-641 |
| Cow position: | chr2:56054274-56054911 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 70-641 |
| Cow position: | chr2:50564872-50565478 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 366 |
| Conread position: | 74-636 |
| Cow position: | chr2:30379841-30380440 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 75-637 |
| Cow position: | chr2:5902169-5901576 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 76-640 |
| Cow position: | chr2:40312091-40312685 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 85-482 |
| Cow position: | chr2:10692788-10692387 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 94-511 |
| Cow position: | chr2:17807973-17807542 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 33 |
| Conread position: | 94-640 |
| Cow position: | chr2:2018150-2018724 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 33 |
| Conread position: | 101-636 |
| Cow position: | chr2:50432052-50431484 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 111-447 |
| Cow position: | chr2:56265551-56265917 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 111-641 |
| Cow position: | chr2:24927987-24928553 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 16 |
| Conread position: | 141-458 |
| Cow position: | chr2:83525099-83525419 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 190, 15 |
| Conread position: | 141-458 |
| Cow position: | chr2:83566320-83565998 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 190, 56 |
| Conread position: | 147-640 |
| Cow position: | chr2:16301558-16302082 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 270 |
| Conread position: | 159-546 |
| Cow position: | chr2:194285-193888 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 44 |
| Conread position: | 186-619 |
| Cow position: | chr2:7506905-7506442 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 229 |
| Conread position: | 190-641 |
| Cow position: | chr2:68191675-68191191 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 235 |
| Conread position: | 191-641 |
| Cow position: | chr2:86309732-86309244 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 80 |
| Conread position: | 229-511 |
| Cow position: | chr2:79967257-79966958 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 181 |
| Conread position: | 246-566 |
| Cow position: | chr2:21407209-21407558 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 171 |
| Conread position: | 290-534 |
| Cow position: | chr2:38271553-38271301 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 290-581 |
| Cow position: | chr2:6038368-6038052 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 41, 102 |
| Conread position: | 295-641 |
| Cow position: | chr2:34467847-34467489 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 10, 81 |
Show alignments to all cow chromosomes.