Cow genome map
| Conread name: | rpigcb_17958.y1 |
| Conread position: | 1-361 |
| Cow position: | chr5:39935862-39936210 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 134 |
| Conread position: | 1-596 |
| Cow position: | chr5:7396023-7396654 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 1-629 |
| Cow position: | chr5:15761596-15760929 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-633 |
| Cow position: | chr5:14905278-14904641 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr5:29256438-29255763 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr5:41066798-41067462 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr5:51745996-51746669 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 416 |
| Conread position: | 1-636 |
| Cow position: | chr5:56442050-56442707 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 1-637 |
| Cow position: | chr5:18901108-18901765 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 136 |
| Conread position: | 1-637 |
| Cow position: | chr5:46666847-46667523 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-637 |
| Cow position: | chr5:49221719-49221046 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-637 |
| Cow position: | chr5:52830007-52829335 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 225 |
| Conread position: | 1-640 |
| Cow position: | chr5:29742783-29742103 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 1-640 |
| Cow position: | chr5:46671388-46672062 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 1-641 |
| Cow position: | chr5:14636805-14636123 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-641 |
| Cow position: | chr5:41229269-41228593 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 1-641 |
| Cow position: | chr5:41952301-41951613 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-641 |
| Cow position: | chr5:48805677-48805014 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 112 |
| Conread position: | 1-641 |
| Cow position: | chr5:54786334-54785653 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 2-641 |
| Cow position: | chr5:46626499-46625820 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 128 |
| Conread position: | 5-632 |
| Cow position: | chr5:23829392-23828750 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 5-641 |
| Cow position: | chr5:3789005-3789679 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 127 |
| Conread position: | 14-548 |
| Cow position: | chr5:17646295-17645734 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 119 |
| Conread position: | 66-641 |
| Cow position: | chr5:41411596-41410983 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 75-292 |
| Cow position: | chr5:23642361-23642144 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 110-641 |
| Cow position: | chr5:27549603-27549058 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 15 |
| Conread position: | 156-511 |
| Cow position: | chr5:46707580-46707949 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 16 |
| Conread position: | 161-609 |
| Cow position: | chr5:8178076-8178558 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 106 |
| Conread position: | 161-639 |
| Cow position: | chr5:68593370-68593874 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 42 |
| Conread position: | 170-629 |
| Cow position: | chr5:41548061-41547575 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 181 |
| Conread position: | 177-632 |
| Cow position: | chr5:34708722-34709216 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 241 |
| Conread position: | 187-588 |
| Cow position: | chr5:75755547-75755982 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 200 |
| Conread position: | 204-636 |
| Cow position: | chr5:445459-445930 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 214 |
| Conread position: | 205-641 |
| Cow position: | chr5:5716094-5715633 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 200 |
| Conread position: | 223-636 |
| Cow position: | chr5:13807752-13807311 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 189 |
| Conread position: | 225-640 |
| Cow position: | chr5:41980417-41980840 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 123 |
| Conread position: | 290-511 |
| Cow position: | chr5:58353296-58353517 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 290-640 |
| Cow position: | chr5:1105794-1105422 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 120 |
| Conread position: | 291-488 |
| Cow position: | chr5:48056136-48056338 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 109 |
Show alignments to all cow chromosomes.