Cow genome map
| Conread name: | rpigcb_17958.y1 |
| Conread position: | 1-343 |
| Cow position: | chr6:916955-917313 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-343 |
| Cow position: | chr6:18970515-18970170 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 1-343 |
| Cow position: | chr6:21975864-21976209 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-343 |
| Cow position: | chr6:57181732-57182084 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 131 |
| Conread position: | 1-367 |
| Cow position: | chr6:27172742-27173123 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-373 |
| Cow position: | chr6:12628814-12629202 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-430 |
| Cow position: | chr6:68030091-68030549 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-478 |
| Cow position: | chr6:59618981-59619495 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 142 |
| Conread position: | 1-501 |
| Cow position: | chr6:58605443-58605971 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 1-511 |
| Cow position: | chr6:4904072-4903550 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 104 |
| Conread position: | 1-516 |
| Cow position: | chr6:59596174-59596701 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 1-518 |
| Cow position: | chr6:9734051-9733532 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 1-581 |
| Cow position: | chr6:65875370-65874753 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-613 |
| Cow position: | chr6:41231399-41232049 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 1-631 |
| Cow position: | chr6:182628-181966 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 132 |
| Conread position: | 1-634 |
| Cow position: | chr6:26668111-26667437 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 90 |
| Conread position: | 1-636 |
| Cow position: | chr6:3152130-3152802 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 137 |
| Conread position: | 1-636 |
| Cow position: | chr6:39912237-39912912 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 1-636 |
| Cow position: | chr6:55238608-55239280 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 137 |
| Conread position: | 1-636 |
| Cow position: | chr6:58030692-58031357 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 1-637 |
| Cow position: | chr6:50121015-50120342 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 1-641 |
| Cow position: | chr6:705918-706590 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 1-641 |
| Cow position: | chr6:5946864-5946180 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 1-641 |
| Cow position: | chr6:16592877-16593543 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 127 |
| Conread position: | 1-641 |
| Cow position: | chr6:20450872-20451553 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 1-641 |
| Cow position: | chr6:34504609-34503929 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 1-641 |
| Cow position: | chr6:50637197-50637851 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 1-641 |
| Cow position: | chr6:55539358-55538679 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 130 |
| Conread position: | 2-636 |
| Cow position: | chr6:16050377-16049705 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 123 |
| Conread position: | 2-640 |
| Cow position: | chr6:14851832-14851164 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 2-641 |
| Cow position: | chr6:60876212-60876890 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 133 |
| Conread position: | 3-636 |
| Cow position: | chr6:28001462-28000806 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 120 |
| Conread position: | 3-637 |
| Cow position: | chr6:9738339-9737673 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 135 |
| Conread position: | 5-343 |
| Cow position: | chr6:1105233-1104897 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 5-543 |
| Cow position: | chr6:10611744-10612322 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 7-488 |
| Cow position: | chr6:33508183-33508674 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 84 |
| Conread position: | 8-290 |
| Cow position: | chr6:58072579-58072861 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 8-511 |
| Cow position: | chr6:27527040-27526515 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 9-641 |
| Cow position: | chr6:32419868-32420535 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 130 |
| Conread position: | 15-290 |
| Cow position: | chr6:16624707-16624981 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 16-424 |
| Cow position: | chr6:25357932-25357503 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 16-636 |
| Cow position: | chr6:2089210-2089859 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 18-518 |
| Cow position: | chr6:50113619-50114134 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 32-343 |
| Cow position: | chr6:55042180-55041859 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 57-399 |
| Cow position: | chr6:58016328-58016690 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 77 |
| Conread position: | 59-499 |
| Cow position: | chr6:7105555-7105095 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 70-604 |
| Cow position: | chr6:11639228-11638650 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 222 |
| Conread position: | 71-517 |
| Cow position: | chr6:2618577-2618112 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 75-636 |
| Cow position: | chr6:21711694-21712296 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 86-641 |
| Cow position: | chr6:10598005-10598580 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 70 |
| Conread position: | 103-511 |
| Cow position: | chr6:224489-224057 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 137 |
| Conread position: | 132-641 |
| Cow position: | chr6:39136549-39137086 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 290 |
| Conread position: | 140-640 |
| Cow position: | chr6:16410115-16410648 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 148-497 |
| Cow position: | chr6:13314966-13314593 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 98 |
| Conread position: | 157-641 |
| Cow position: | chr6:53810664-53811163 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 50 |
| Conread position: | 158-343 |
| Cow position: | chr6:47539454-47539633 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 158-636 |
| Cow position: | chr6:19718658-19719157 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 111 |
| Conread position: | 185-641 |
| Cow position: | chr6:19044314-19044784 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 225 |
| Conread position: | 187-641 |
| Cow position: | chr6:1274743-1274259 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 200 |
| Conread position: | 240-636 |
| Cow position: | chr6:46225807-46225375 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 178 |
| Conread position: | 290-515 |
| Cow position: | chr6:32664885-32664649 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 290-636 |
| Cow position: | chr6:11389397-11389024 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 290-636 |
| Cow position: | chr6:54887375-54887025 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 40, 101 |
Show alignments to all cow chromosomes.