Cow genome map

Conread name: rpigcb_17958.y1

Conread position: 1-343
Cow position: chr7:6723038-6723395 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-395
Cow position: chr7:42428604-42428999 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 100

Conread position: 1-455
Cow position: chr7:55041517-55041998 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-461
Cow position: chr7:259752-259294 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 1-487
Cow position: chr7:32713605-32713103 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 130

Conread position: 1-511
Cow position: chr7:42430640-42431174 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-518
Cow position: chr7:58336022-58335475 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 136

Conread position: 1-518
Cow position: chr7:60741935-60741392 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 140

Conread position: 1-563
Cow position: chr7:62990734-62991327 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 138

Conread position: 1-583
Cow position: chr7:5304982-5304357 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 131

Conread position: 1-587
Cow position: chr7:31877485-31878101 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 131

Conread position: 1-612
Cow position: chr7:60758190-60757564 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-634
Cow position: chr7:113620-114280 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-636
Cow position: chr7:900247-899574 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-636
Cow position: chr7:1441832-1441157 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-636
Cow position: chr7:3634743-3634077 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-636
Cow position: chr7:37507750-37507075 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-640
Cow position: chr7:30173232-30172566 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 101

Conread position: 1-640
Cow position: chr7:49784715-49784048 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 45

Conread position: 1-641
Cow position: chr7:536831-536170 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 89

Conread position: 1-641
Cow position: chr7:13530902-13530242 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-641
Cow position: chr7:24874293-24873611 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 1-641
Cow position: chr7:33069500-33068853 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 1-641
Cow position: chr7:39794868-39795545 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 132

Conread position: 1-641
Cow position: chr7:59774316-59774993 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 129

Conread position: 2-427
Cow position: chr7:62952353-62952784 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 2-589
Cow position: chr7:53363191-53362570 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 2-603
Cow position: chr7:61577122-61576486 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 2-636
Cow position: chr7:20796453-20795799 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 136

Conread position: 2-637
Cow position: chr7:3158298-3158972 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 2-641
Cow position: chr7:49845272-49844594 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 3-511
Cow position: chr7:1722118-1721628 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 5-511
Cow position: chr7:67802337-67802871 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 127

Conread position: 6-641
Cow position: chr7:759849-759171 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 124

Conread position: 8-511
Cow position: chr7:30414816-30415322 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 130

Conread position: 9-593
Cow position: chr7:29346917-29346319 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 129

Conread position: 10-511
Cow position: chr7:48637731-48638233 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 120

Conread position: 12-641
Cow position: chr7:44745815-44745165 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 18-641
Cow position: chr7:59559359-59558706 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 122

Conread position: 22-508
Cow position: chr7:56822695-56822182 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 57

Conread position: 32-311
Cow position: chr7:57209829-57209547 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 109

Conread position: 41-641
Cow position: chr7:52166831-52167475 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 91

Conread position: 56-641
Cow position: chr7:43110704-43110077 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 78

Conread position: 65-641
Cow position: chr7:41463112-41463728 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 56

Conread position: 70-637
Cow position: chr7:65819652-65819043 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 64

Conread position: 81-473
Cow position: chr7:59436848-59437271 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 53

Conread position: 83-637
Cow position: chr7:27515956-27516524 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 38

Conread position: 104-634
Cow position: chr7:955793-956335 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 23

Conread position: 106-626
Cow position: chr7:51018702-51019237 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 19

Conread position: 108-640
Cow position: chr7:35428660-35428102 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 17

Conread position: 114-636
Cow position: chr7:23554104-23554636 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 15

Conread position: 132-641
Cow position: chr7:44597806-44597249 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 304

Conread position: 135-640
Cow position: chr7:19399049-19398510 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 59

Conread position: 140-636
Cow position: chr7:40708895-40709430 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 317

Conread position: 150-462
Cow position: chr7:52044608-52044935 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 142, 104

Conread position: 167-641
Cow position: chr7:65326559-65326082 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 5

Conread position: 168-633
Cow position: chr7:27790471-27790952 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 141

Conread position: 180-636
Cow position: chr7:27573007-27573496 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 232

Conread position: 191-589
Cow position: chr7:19269279-19268881 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 166

Conread position: 204-511
Cow position: chr7:13854431-13854759 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 19

Conread position: 204-637
Cow position: chr7:49216967-49217434 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 206

Conread position: 208-511
Cow position: chr7:6433286-6432969 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 86, 193

Conread position: 221-641
Cow position: chr7:5404549-5404100 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 53

Conread position: 290-518
Cow position: chr7:33803825-33804058 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 41, 117

Conread position: 291-641
Cow position: chr7:21326144-21326513 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 49

Show alignments to all cow chromosomes.