Cow genome map
Conread name: | rpigcb_17958.y1 |
Conread position: | 1-343 |
Cow position: | chr7:6723038-6723395 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-395 |
Cow position: | chr7:42428604-42428999 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 100 |
Conread position: | 1-455 |
Cow position: | chr7:55041517-55041998 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-461 |
Cow position: | chr7:259752-259294 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 20 |
Conread position: | 1-487 |
Cow position: | chr7:32713605-32713103 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 130 |
Conread position: | 1-511 |
Cow position: | chr7:42430640-42431174 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-518 |
Cow position: | chr7:58336022-58335475 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 136 |
Conread position: | 1-518 |
Cow position: | chr7:60741935-60741392 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 140 |
Conread position: | 1-563 |
Cow position: | chr7:62990734-62991327 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 138 |
Conread position: | 1-583 |
Cow position: | chr7:5304982-5304357 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-587 |
Cow position: | chr7:31877485-31878101 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-612 |
Cow position: | chr7:60758190-60757564 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 463 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-634 |
Cow position: | chr7:113620-114280 (view UCSC Genome Browser custom track) |
Alignm length: | 667 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-636 |
Cow position: | chr7:900247-899574 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-636 |
Cow position: | chr7:1441832-1441157 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-636 |
Cow position: | chr7:3634743-3634077 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-636 |
Cow position: | chr7:37507750-37507075 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 499 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-640 |
Cow position: | chr7:30173232-30172566 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 101 |
Conread position: | 1-640 |
Cow position: | chr7:49784715-49784048 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 45 |
Conread position: | 1-641 |
Cow position: | chr7:536831-536170 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 89 |
Conread position: | 1-641 |
Cow position: | chr7:13530902-13530242 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-641 |
Cow position: | chr7:24874293-24873611 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 20 |
Conread position: | 1-641 |
Cow position: | chr7:33069500-33068853 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-641 |
Cow position: | chr7:39794868-39795545 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 132 |
Conread position: | 1-641 |
Cow position: | chr7:59774316-59774993 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 129 |
Conread position: | 2-427 |
Cow position: | chr7:62952353-62952784 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 19 |
Conread position: | 2-589 |
Cow position: | chr7:53363191-53362570 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 2-603 |
Cow position: | chr7:61577122-61576486 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 130 |
Conread position: | 2-636 |
Cow position: | chr7:20796453-20795799 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 136 |
Conread position: | 2-637 |
Cow position: | chr7:3158298-3158972 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 37 |
Conread position: | 2-641 |
Cow position: | chr7:49845272-49844594 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 59 |
Conread position: | 3-511 |
Cow position: | chr7:1722118-1721628 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 27 |
Conread position: | 5-511 |
Cow position: | chr7:67802337-67802871 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 127 |
Conread position: | 6-641 |
Cow position: | chr7:759849-759171 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 124 |
Conread position: | 8-511 |
Cow position: | chr7:30414816-30415322 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 130 |
Conread position: | 9-593 |
Cow position: | chr7:29346917-29346319 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 129 |
Conread position: | 10-511 |
Cow position: | chr7:48637731-48638233 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 120 |
Conread position: | 12-641 |
Cow position: | chr7:44745815-44745165 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 37 |
Conread position: | 18-641 |
Cow position: | chr7:59559359-59558706 (view UCSC Genome Browser custom track) |
Alignm length: | 659 |
Alignm identity: | 486 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 122 |
Conread position: | 22-508 |
Cow position: | chr7:56822695-56822182 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 57 |
Conread position: | 32-311 |
Cow position: | chr7:57209829-57209547 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 109 |
Conread position: | 41-641 |
Cow position: | chr7:52166831-52167475 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 91 |
Conread position: | 56-641 |
Cow position: | chr7:43110704-43110077 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 78 |
Conread position: | 65-641 |
Cow position: | chr7:41463112-41463728 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 56 |
Conread position: | 70-637 |
Cow position: | chr7:65819652-65819043 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 64 |
Conread position: | 81-473 |
Cow position: | chr7:59436848-59437271 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 53 |
Conread position: | 83-637 |
Cow position: | chr7:27515956-27516524 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 38 |
Conread position: | 104-634 |
Cow position: | chr7:955793-956335 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 23 |
Conread position: | 106-626 |
Cow position: | chr7:51018702-51019237 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 19 |
Conread position: | 108-640 |
Cow position: | chr7:35428660-35428102 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 17 |
Conread position: | 114-636 |
Cow position: | chr7:23554104-23554636 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 15 |
Conread position: | 132-641 |
Cow position: | chr7:44597806-44597249 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 304 |
Conread position: | 135-640 |
Cow position: | chr7:19399049-19398510 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 59 |
Conread position: | 140-636 |
Cow position: | chr7:40708895-40709430 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 317 |
Conread position: | 150-462 |
Cow position: | chr7:52044608-52044935 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 243 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 142, 104 |
Conread position: | 167-641 |
Cow position: | chr7:65326559-65326082 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 5 |
Conread position: | 168-633 |
Cow position: | chr7:27790471-27790952 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 141 |
Conread position: | 180-636 |
Cow position: | chr7:27573007-27573496 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 232 |
Conread position: | 191-589 |
Cow position: | chr7:19269279-19268881 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 166 |
Conread position: | 204-511 |
Cow position: | chr7:13854431-13854759 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 19 |
Conread position: | 204-637 |
Cow position: | chr7:49216967-49217434 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 206 |
Conread position: | 208-511 |
Cow position: | chr7:6433286-6432969 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 230 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 86, 193 |
Conread position: | 221-641 |
Cow position: | chr7:5404549-5404100 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 53 |
Conread position: | 290-518 |
Cow position: | chr7:33803825-33804058 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 180 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 41, 117 |
Conread position: | 291-641 |
Cow position: | chr7:21326144-21326513 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 49 |
Show alignments to all cow chromosomes.