Cow genome map
Conread name: | rpigcb_17958.y1 |
Conread position: | 1-290 |
Cow position: | chrX:16023824-16024113 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 127 |
Conread position: | 1-292 |
Cow position: | chrX:24444306-24444011 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 123 |
Conread position: | 1-343 |
Cow position: | chrX:20741608-20741960 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 55 |
Conread position: | 1-359 |
Cow position: | chrX:6854951-6854598 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 54 |
Conread position: | 1-365 |
Cow position: | chrX:33829794-33830180 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 20 |
Conread position: | 1-454 |
Cow position: | chrX:27497581-27498060 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-483 |
Cow position: | chrX:39697517-39698021 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-499 |
Cow position: | chrX:21818699-21818204 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 46 |
Conread position: | 1-501 |
Cow position: | chrX:23222277-23221767 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 140 |
Conread position: | 1-511 |
Cow position: | chrX:25818070-25817534 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 139 |
Conread position: | 1-514 |
Cow position: | chrX:7484556-7485099 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 137 |
Conread position: | 1-589 |
Cow position: | chrX:8482187-8482819 (view UCSC Genome Browser custom track) |
Alignm length: | 638 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 147 |
Conread position: | 1-604 |
Cow position: | chrX:15122412-15121794 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 132 |
Conread position: | 1-608 |
Cow position: | chrX:21414616-21415266 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 465 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 131 |
Conread position: | 1-629 |
Cow position: | chrX:13406537-13405870 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-631 |
Cow position: | chrX:22818823-22819477 (view UCSC Genome Browser custom track) |
Alignm length: | 667 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 216 |
Conread position: | 1-633 |
Cow position: | chrX:3650078-3649399 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 132 |
Conread position: | 1-633 |
Cow position: | chrX:23279776-23280433 (view UCSC Genome Browser custom track) |
Alignm length: | 671 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-634 |
Cow position: | chrX:29099169-29099840 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 47 |
Conread position: | 1-636 |
Cow position: | chrX:2560198-2559533 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 499 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 79 |
Conread position: | 1-636 |
Cow position: | chrX:5320964-5320292 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-636 |
Cow position: | chrX:8640537-8641215 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-636 |
Cow position: | chrX:9169856-9169187 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-636 |
Cow position: | chrX:16278409-16279079 (view UCSC Genome Browser custom track) |
Alignm length: | 678 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 20 |
Conread position: | 1-636 |
Cow position: | chrX:21343145-21343821 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-636 |
Cow position: | chrX:22564935-22564260 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 137 |
Conread position: | 1-636 |
Cow position: | chrX:23342242-23341565 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 517 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 132 |
Conread position: | 1-636 |
Cow position: | chrX:27317980-27318658 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-636 |
Cow position: | chrX:28518962-28518293 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 20 |
Conread position: | 1-636 |
Cow position: | chrX:28753587-28752913 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 499 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-636 |
Cow position: | chrX:29912090-29912766 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 141 |
Conread position: | 1-636 |
Cow position: | chrX:39713300-39713978 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 137 |
Conread position: | 1-637 |
Cow position: | chrX:23134346-23135006 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-637 |
Cow position: | chrX:27983604-27982942 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 1-639 |
Cow position: | chrX:36535980-36535305 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-640 |
Cow position: | chrX:28625004-28624330 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 20 |
Conread position: | 1-641 |
Cow position: | chrX:10867101-10866435 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 19 |
Conread position: | 1-641 |
Cow position: | chrX:11074404-11073776 (view UCSC Genome Browser custom track) |
Alignm length: | 655 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 20 |
Conread position: | 1-641 |
Cow position: | chrX:16702431-16703103 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 106 |
Conread position: | 1-641 |
Cow position: | chrX:21582191-21582874 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 422 |
Conread position: | 1-641 |
Cow position: | chrX:22492785-22493439 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 137 |
Conread position: | 1-641 |
Cow position: | chrX:23039233-23038565 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 117 |
Conread position: | 1-641 |
Cow position: | chrX:23395356-23396039 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-641 |
Cow position: | chrX:26442500-26441828 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 128 |
Conread position: | 1-641 |
Cow position: | chrX:26530722-26531391 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-641 |
Cow position: | chrX:27615562-27616235 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 137 |
Conread position: | 1-641 |
Cow position: | chrX:31728216-31728895 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 131 |
Conread position: | 1-641 |
Cow position: | chrX:32145507-32144836 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 131 |
Conread position: | 1-641 |
Cow position: | chrX:35938310-35937653 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 23 |
Conread position: | 2-516 |
Cow position: | chrX:5365841-5365302 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 131 |
Conread position: | 2-634 |
Cow position: | chrX:34760816-34761491 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 136 |
Conread position: | 2-636 |
Cow position: | chrX:15260865-15260192 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 136 |
Conread position: | 2-636 |
Cow position: | chrX:29082826-29083505 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 132 |
Conread position: | 2-637 |
Cow position: | chrX:322666-323343 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 136 |
Conread position: | 2-637 |
Cow position: | chrX:11976696-11976018 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 90 |
Conread position: | 2-641 |
Cow position: | chrX:5354550-5353871 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 130 |
Conread position: | 2-641 |
Cow position: | chrX:23022068-23022745 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 131 |
Conread position: | 2-641 |
Cow position: | chrX:28879826-28879174 (view UCSC Genome Browser custom track) |
Alignm length: | 664 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 85 |
Conread position: | 2-641 |
Cow position: | chrX:44193685-44193008 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 15 |
Conread position: | 3-639 |
Cow position: | chrX:14802068-14801388 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 136 |
Conread position: | 4-518 |
Cow position: | chrX:4767455-4767985 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 83 |
Conread position: | 4-627 |
Cow position: | chrX:21226233-21226895 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 135 |
Conread position: | 4-634 |
Cow position: | chrX:14125493-14124821 (view UCSC Genome Browser custom track) |
Alignm length: | 678 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 134 |
Conread position: | 8-609 |
Cow position: | chrX:40070843-40070210 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 111 |
Conread position: | 8-636 |
Cow position: | chrX:22579625-22578962 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 120 |
Conread position: | 18-640 |
Cow position: | chrX:22869585-22870250 (view UCSC Genome Browser custom track) |
Alignm length: | 672 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 114 |
Conread position: | 23-637 |
Cow position: | chrX:15140756-15140120 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 112 |
Conread position: | 57-641 |
Cow position: | chrX:34442619-34442011 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 465 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 72 |
Conread position: | 62-639 |
Cow position: | chrX:45401188-45400610 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 201 |
Conread position: | 79-633 |
Cow position: | chrX:17890020-17889458 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 55 |
Conread position: | 85-641 |
Cow position: | chrX:17664078-17663487 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 43 |
Conread position: | 99-641 |
Cow position: | chrX:6406208-6406778 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 29 |
Conread position: | 104-593 |
Cow position: | chrX:11499917-11499399 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 29 |
Conread position: | 126-641 |
Cow position: | chrX:18243871-18244414 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 281 |
Conread position: | 134-637 |
Cow position: | chrX:39556902-39556367 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 296 |
Conread position: | 137-518 |
Cow position: | chrX:12289624-12290017 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 72 |
Conread position: | 205-641 |
Cow position: | chrX:27095094-27095551 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 205 |
Conread position: | 245-641 |
Cow position: | chrX:41879922-41879498 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 282 |
Conread position: | 290-636 |
Cow position: | chrX:16046201-16046574 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 116 |
Conread position: | 290-641 |
Cow position: | chrX:39701919-39702283 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 78 |
Show alignments to all cow chromosomes.