Cow genome map

Conread name: rpigcb_7632.y1

Conread position: 28-554
Cow position: chr1:62927438-62927995 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 46

Conread position: 43-563
Cow position: chr1:45005954-45006492 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 29

Conread position: 49-566
Cow position: chr1:21353326-21352781 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 37

Conread position: 55-562
Cow position: chr1:31392295-31391768 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 13

Conread position: 55-569
Cow position: chr1:68846703-68846177 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 21

Conread position: 57-552
Cow position: chr1:16974126-16973592 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 44

Conread position: 58-555
Cow position: chr1:43568508-43567981 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 117

Conread position: 59-566
Cow position: chr1:56644877-56644353 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 286

Conread position: 60-427
Cow position: chr1:9377486-9377088 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 12

Conread position: 60-447
Cow position: chr1:29365411-29365818 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 60-524
Cow position: chr1:14562203-14561720 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 322
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 193, 17

Conread position: 60-524
Cow position: chr1:18195631-18196091 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 12

Conread position: 60-566
Cow position: chr1:7837746-7837226 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 61-441
Cow position: chr1:9263101-9262699 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-441
Cow position: chr1:90605872-90605470 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-441
Cow position: chr1:100709075-100709477 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-444
Cow position: chr1:31363098-31362708 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 11

Conread position: 61-447
Cow position: chr1:31106389-31105981 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-448
Cow position: chr1:8745502-8745910 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-454
Cow position: chr1:18487173-18486759 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-454
Cow position: chr1:21132859-21132456 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-457
Cow position: chr1:31191411-31191004 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 11

Conread position: 61-464
Cow position: chr1:30103573-30103148 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-464
Cow position: chr1:60342055-60342484 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-477
Cow position: chr1:21458696-21459121 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-496
Cow position: chr1:47118961-47119425 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-501
Cow position: chr1:8556690-8557158 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-501
Cow position: chr1:51883619-51884082 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-514
Cow position: chr1:81302119-81302600 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-520
Cow position: chr1:77656552-77657041 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 11

Conread position: 61-521
Cow position: chr1:48249719-48250210 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-524
Cow position: chr1:53311234-53311726 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-524
Cow position: chr1:83135964-83136440 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-529
Cow position: chr1:86593300-86592802 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-532
Cow position: chr1:55145049-55145549 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 16

Conread position: 61-532
Cow position: chr1:82863822-82864314 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 326
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 87, 11

Conread position: 61-532
Cow position: chr1:100420609-100421104 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 11

Conread position: 61-532
Cow position: chr1:101787929-101787437 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 61-540
Cow position: chr1:10725628-10726135 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chr1:20527164-20527672 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-545
Cow position: chr1:22529798-22529294 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 11

Conread position: 61-545
Cow position: chr1:79589863-79590368 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 11

Conread position: 61-547
Cow position: chr1:101524383-101523884 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 270

Conread position: 61-553
Cow position: chr1:11854948-11854424 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 11

Conread position: 61-553
Cow position: chr1:31534856-31535377 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 61-553
Cow position: chr1:55779876-55780394 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-553
Cow position: chr1:78587454-78586933 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:3970260-3969760 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:13251512-13251019 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:14529454-14528943 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-554
Cow position: chr1:15149639-15149117 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:17033588-17033069 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:18087433-18087955 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:19776087-19775566 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:20831886-20832408 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-554
Cow position: chr1:20847009-20846487 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:22012957-22012437 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:26587955-26588476 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:28520655-28521177 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-554
Cow position: chr1:28714043-28714565 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:28812238-28811716 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:33854286-33854793 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 11

Conread position: 61-554
Cow position: chr1:35598806-35598285 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:40058109-40058619 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:40681727-40681205 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:46613288-46612771 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-554
Cow position: chr1:48345189-48345696 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:49267887-49268406 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:54932932-54933453 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 61-554
Cow position: chr1:56205806-56205288 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:56424915-56425436 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:57505795-57506317 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:59483859-59483337 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position: chr1:60251422-60250900 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:61096502-61097026 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:61331958-61331437 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:61340316-61339794 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-554
Cow position: chr1:63045889-63046411 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:63341468-63340946 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:63602780-63602262 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 10

Conread position: 61-554
Cow position: chr1:67832132-67831610 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:68145967-68145445 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:69504370-69503848 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:69671617-69671095 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-554
Cow position: chr1:69769823-69770344 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-554
Cow position: chr1:71559740-71559224 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-554
Cow position: chr1:71794537-71795059 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:73565474-73564952 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:75402900-75403420 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:76872886-76873404 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 11

Conread position: 61-554
Cow position: chr1:76878036-76878557 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:77747750-77748269 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position: chr1:78922009-78921487 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:84446684-84447208 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:85630340-85630862 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:85794961-85795468 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:86545133-86544613 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:89090532-89090011 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 12

Conread position: 61-554
Cow position: chr1:89431407-89431929 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:91105046-91105564 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-554
Cow position: chr1:91673236-91673757 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr1:91902023-91902545 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr1:13438125-13438646 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr1:21377554-21377031 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr1:24441043-24440535 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-555
Cow position: chr1:42875639-42875135 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 11

Conread position: 61-555
Cow position: chr1:66972153-66971634 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr1:72986462-72986984 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr1:79633548-79633028 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr1:86705155-86705663 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 287

Conread position: 61-555
Cow position: chr1:90912833-90913356 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr1:102552016-102552530 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-558
Cow position: chr1:25552810-25553333 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 242

Conread position: 61-561
Cow position: chr1:40510252-40509724 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-562
Cow position: chr1:3383313-3382786 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:5504942-5505471 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 11

Conread position: 61-562
Cow position: chr1:8602966-8602443 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:11324518-11325021 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 338
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 71, 11

Conread position: 61-562
Cow position: chr1:19441521-19441007 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 9

Conread position: 61-562
Cow position: chr1:21576552-21577075 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 11

Conread position: 61-562
Cow position: chr1:25053583-25053054 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:28876096-28876630 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 11

Conread position: 61-562
Cow position: chr1:30078947-30079474 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:33548390-33547868 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:38711716-38712245 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:47454973-47454447 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:53309652-53309131 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 11

Conread position: 61-562
Cow position: chr1:57570835-57571365 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:58339926-58340447 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:63048583-63049111 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 11

Conread position: 61-562
Cow position: chr1:65389563-65390090 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-562
Cow position: chr1:67078820-67078294 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:68818898-68818377 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-562
Cow position: chr1:72086600-72087132 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 11

Conread position: 61-562
Cow position: chr1:76618469-76617942 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-562
Cow position: chr1:82090918-82091427 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 11

Conread position: 61-562
Cow position: chr1:82921145-82920609 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 11

Conread position: 61-562
Cow position: chr1:85777455-85776929 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-562
Cow position: chr1:86600011-86599478 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:88178862-88179392 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:89484120-89484624 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 11

Conread position: 61-562
Cow position: chr1:92279789-92279283 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:94662658-94663186 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:95474884-95474367 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr1:99916444-99916972 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-563
Cow position: chr1:31351762-31351230 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-563
Cow position: chr1:82478989-82479522 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-563
Cow position: chr1:102431735-102431204 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-564
Cow position: chr1:22481656-22481122 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-566
Cow position: chr1:8828025-8828557 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-566
Cow position: chr1:19236493-19235960 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-566
Cow position: chr1:21134103-21133595 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-566
Cow position: chr1:26812068-26811537 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 61-566
Cow position: chr1:29037546-29038077 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-566
Cow position: chr1:38279735-38279201 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 11

Conread position: 61-566
Cow position: chr1:56169964-56170496 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-566
Cow position: chr1:67005885-67006415 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-566
Cow position: chr1:72767019-72766501 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 11

Conread position: 61-567
Cow position: chr1:69406162-69406696 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-569
Cow position: chr1:16798090-16797561 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-569
Cow position: chr1:56439406-56438888 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 347
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 92, 11

Conread position: 61-569
Cow position: chr1:61342707-61342166 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-569
Cow position: chr1:66490586-66491122 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-569
Cow position: chr1:79553499-79554040 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 11

Conread position: 61-583
Cow position: chr1:21090454-21091020 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 62-447
Cow position: chr1:52067632-52068039 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-457
Cow position: chr1:56141348-56140935 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 10

Conread position: 62-495
Cow position: chr1:97285654-97285194 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 14

Conread position: 62-537
Cow position: chr1:100536162-100536657 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 334
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 87, 21

Conread position: 62-552
Cow position: chr1:55274037-55273520 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-553
Cow position: chr1:72139217-72139720 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 10

Conread position: 62-554
Cow position: chr1:9261517-9262022 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 10

Conread position: 62-554
Cow position: chr1:61747160-61746656 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 9

Conread position: 62-562
Cow position: chr1:11199626-11199098 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-562
Cow position: chr1:57363327-57362800 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 63-551
Cow position: chr1:30065384-30065897 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 10

Conread position: 63-553
Cow position: chr1:13405379-13404866 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 9

Conread position: 63-553
Cow position: chr1:48811189-48810669 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 63-553
Cow position: chr1:99572557-99572045 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-554
Cow position: chr1:18024792-18024292 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 42

Conread position: 63-562
Cow position: chr1:57659625-57660133 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-562
Cow position: chr1:61203388-61203917 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 186

Conread position: 63-565
Cow position: chr1:7324077-7324610 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-566
Cow position: chr1:61748439-61747916 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-569
Cow position: chr1:100451663-100451135 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 251

Conread position: 63-588
Cow position: chr1:24654839-24655393 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 249

Conread position: 64-554
Cow position: chr1:80565071-80564552 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 512

Conread position: 65-452
Cow position: chr1:30440175-30440571 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 95

Conread position: 65-452
Cow position: chr1:81357639-81357239 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 7

Conread position: 67-555
Cow position: chr1:57574576-57574060 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 5

Conread position: 68-554
Cow position: chr1:83169449-83169968 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 68-562
Cow position: chr1:77104351-77103836 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 22

Conread position: 69-555
Cow position: chr1:57970586-57970085 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 184

Conread position: 72-441
Cow position: chr1:28414201-28413818 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 78, 108

Conread position: 72-538
Cow position: chr1:90291642-90291148 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 304
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 274

Conread position: 72-540
Cow position: chr1:31415209-31414717 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 276

Conread position: 72-553
Cow position: chr1:85807596-85807107 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 113

Conread position: 72-554
Cow position: chr1:8471145-8470636 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 43

Conread position: 72-554
Cow position: chr1:26537172-26536660 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 72-555
Cow position: chr1:55044248-55043737 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 375

Conread position: 72-555
Cow position: chr1:57679338-57678852 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 21

Conread position: 72-561
Cow position: chr1:89186433-89185931 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 65

Conread position: 72-562
Cow position: chr1:17938738-17938220 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 262

Conread position: 72-562
Cow position: chr1:33715974-33716493 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 517

Conread position: 72-566
Cow position: chr1:30034644-30035151 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 44

Conread position: 72-566
Cow position: chr1:73064321-73063801 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 276

Conread position: 72-569
Cow position: chr1:71134910-71135438 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 275

Conread position: 72-571
Cow position: chr1:3339680-3340212 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 231

Conread position: 73-563
Cow position: chr1:82369434-82369951 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 277

Conread position: 73-586
Cow position: chr1:58418691-58419231 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 261

Conread position: 74-562
Cow position: chr1:14241043-14240534 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 118

Conread position: 75-487
Cow position: chr1:45737499-45737935 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 279
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 95

Conread position: 75-557
Cow position: chr1:58440275-58439772 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 31

Conread position: 75-562
Cow position: chr1:71791939-71792462 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 75-563
Cow position: chr1:73762512-73762007 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 39

Conread position: 76-540
Cow position: chr1:98354377-98353883 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 76-562
Cow position: chr1:58192784-58192273 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 110

Conread position: 77-569
Cow position: chr1:70388295-70387785 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 118

Conread position: 78-554
Cow position: chr1:21677821-21678317 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 145

Conread position: 79-563
Cow position: chr1:101833420-101833932 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 14

Conread position: 79-568
Cow position: chr1:53519687-53520202 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 65

Conread position: 80-554
Cow position: chr1:7405693-7406197 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 83-554
Cow position: chr1:7711808-7712300 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 170

Conread position: 86-436
Cow position: chr1:27493993-27494356 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 44

Conread position: 86-553
Cow position: chr1:52355645-52355147 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 87-522
Cow position: chr1:52864245-52863795 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 295
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 68, 83

Conread position: 89-594
Cow position: chr1:65734966-65734457 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 328
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 102

Conread position: 90-562
Cow position: chr1:29428629-29429137 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 503

Conread position: 91-562
Cow position: chr1:9595905-9595413 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 41

Conread position: 96-563
Cow position: chr1:53649691-53650188 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 9

Conread position: 97-566
Cow position: chr1:57758954-57759446 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 252

Conread position: 99-517
Cow position: chr1:38417858-38418310 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 247

Conread position: 101-507
Cow position: chr1:53396751-53397169 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 43

Conread position: 103-554
Cow position: chr1:88027874-88028347 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 28

Conread position: 103-555
Cow position: chr1:16838362-16838843 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 439

Conread position: 105-531
Cow position: chr1:24562705-24562253 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 250

Conread position: 105-531
Cow position: chr1:24572092-24571643 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 250

Conread position: 107-532
Cow position: chr1:13718782-13718334 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 302
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 20

Conread position: 112-452
Cow position: chr1:34684541-34684899 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 39, 66

Conread position: 113-554
Cow position: chr1:54472359-54471888 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 113-555
Cow position: chr1:2764169-2764649 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 195

Conread position: 116-554
Cow position: chr1:89793011-89793479 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 122-464
Cow position: chr1:55494000-55493635 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 125-557
Cow position: chr1:20797893-20798349 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 88

Conread position: 127-445
Cow position: chr1:53368280-53368618 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 195

Conread position: 127-553
Cow position: chr1:20543295-20543753 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 130-554
Cow position: chr1:52053893-52054347 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 130-554
Cow position: chr1:88563839-88563398 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 408

Conread position: 131-554
Cow position: chr1:11289316-11288861 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 369

Conread position: 132-540
Cow position: chr1:17009646-17009220 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 171

Conread position: 147-554
Cow position: chr1:26722570-26722138 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 148-540
Cow position: chr1:8517977-8517558 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 148-554
Cow position: chr1:19158364-19157931 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 148-554
Cow position: chr1:68610676-68610252 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 46

Conread position: 150-554
Cow position: chr1:77554902-77554477 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 68

Conread position: 150-557
Cow position: chr1:30494663-30495086 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 181

Conread position: 155-554
Cow position: chr1:73967612-73968038 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 157-487
Cow position: chr1:12872351-12871996 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 88, 34

Conread position: 158-554
Cow position: chr1:99118587-99119010 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 162-551
Cow position: chr1:67913181-67913600 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 75

Conread position: 163-577
Cow position: chr1:88530861-88530434 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 81

Conread position: 164-554
Cow position: chr1:47079071-47078654 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 166-562
Cow position: chr1:6165100-6165508 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 10

Conread position: 170-447
Cow position: chr1:31707597-31707894 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 170-554
Cow position: chr1:56666215-56666626 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 177-553
Cow position: chr1:43449379-43448985 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 88

Conread position: 177-566
Cow position: chr1:46820737-46821150 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 124

Conread position: 178-427
Cow position: chr1:33656062-33655793 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 178-554
Cow position: chr1:7162685-7162282 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 178-554
Cow position: chr1:89234909-89234506 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 180-486
Cow position: chr1:11874513-11874185 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 81, 34

Conread position: 182-424
Cow position: chr1:48036426-48036687 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 185-554
Cow position: chr1:73463095-73463490 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 156

Conread position: 185-554
Cow position: chr1:90393624-90393231 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 20

Conread position: 185-554
Cow position: chr1:99675206-99674810 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 186-555
Cow position: chr1:100888376-100887981 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 125

Conread position: 187-562
Cow position: chr1:53578189-53578588 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 57

Conread position: 188-434
Cow position: chr1:9308885-9308621 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 122

Conread position: 188-562
Cow position: chr1:37324135-37323749 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 136

Conread position: 193-561
Cow position: chr1:33987689-33987290 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 385

Conread position: 193-564
Cow position: chr1:6241135-6240746 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 153

Conread position: 196-554
Cow position: chr1:102814614-102814999 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 198-554
Cow position: chr1:55328084-55327711 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 126

Conread position: 200-554
Cow position: chr1:23861564-23861183 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 206-554
Cow position: chr1:22789552-22789930 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 52, 0

Conread position: 208-559
Cow position: chr1:31342243-31341877 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 135

Conread position: 209-555
Cow position: chr1:99117168-99117541 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 10, 299

Conread position: 209-566
Cow position: chr1:88328325-88327948 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 211-554
Cow position: chr1:39480328-39479965 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 121

Conread position: 212-555
Cow position: chr1:72864106-72864472 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 216-552
Cow position: chr1:57946105-57946454 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 77

Conread position: 216-562
Cow position: chr1:4336924-4337299 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 173

Conread position: 218-477
Cow position: chr1:84284251-84283965 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 220-554
Cow position: chr1:73440131-73440492 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 221-556
Cow position: chr1:51980153-51980506 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 223-554
Cow position: chr1:16819790-16820132 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 203

Conread position: 224-554
Cow position: chr1:93850481-93850827 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 23

Conread position: 225-557
Cow position: chr1:38545547-38545192 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 228-562
Cow position: chr1:99582276-99581923 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 110

Conread position: 230-529
Cow position: chr1:54163903-54163586 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 49

Conread position: 240-487
Cow position: chr1:40964951-40964687 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 138, 0

Conread position: 241-521
Cow position: chr1:37421107-37420825 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 146, 24

Conread position: 243-562
Cow position: chr1:79334789-79334454 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 330

Conread position: 244-554
Cow position: chr1:64942337-64942023 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 209

Conread position: 248-546
Cow position: chr1:29656389-29656707 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 270

Conread position: 253-436
Cow position: chr1:72806597-72806790 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 253-456
Cow position: chr1:81860302-81860087 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 132, 0

Conread position: 253-553
Cow position: chr1:86506132-86505829 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 31

Conread position: 253-554
Cow position: chr1:21258391-21258076 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 68

Conread position: 253-554
Cow position: chr1:31646416-31646102 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 269

Conread position: 253-554
Cow position: chr1:34533449-34533767 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-554
Cow position: chr1:62508041-62507719 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 249

Conread position: 253-554
Cow position: chr1:73010192-73010510 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-555
Cow position: chr1:33899749-33900066 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 106

Conread position: 253-555
Cow position: chr1:57397105-57396798 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 48

Conread position: 253-562
Cow position: chr1:3931132-3930807 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 305

Conread position: 253-562
Cow position: chr1:52371180-52371505 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 320

Conread position: 253-562
Cow position: chr1:52379501-52379826 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 320

Conread position: 253-562
Cow position: chr1:55159175-55158850 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 320

Conread position: 253-562
Cow position: chr1:100591564-100591240 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 119

Conread position: 253-563
Cow position: chr1:39235295-39234968 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-563
Cow position: chr1:76749180-76748858 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 96

Conread position: 255-532
Cow position: chr1:24580616-24580910 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 123, 0

Conread position: 255-566
Cow position: chr1:19484031-19483709 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 123, 16

Conread position: 256-486
Cow position: chr1:64595099-64594852 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 191
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 129, 0

Conread position: 257-532
Cow position: chr1:44127629-44127338 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 53

Conread position: 260-554
Cow position: chr1:86496504-86496815 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 261-537
Cow position: chr1:26362192-26361914 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 117, 58

Conread position: 261-554
Cow position: chr1:12375088-12374778 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 261-554
Cow position: chr1:17188024-17187714 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 261-554
Cow position: chr1:77924697-77925007 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 261-554
Cow position: chr1:92921020-92920710 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 261-554
Cow position: chr1:95456568-95456877 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 235

Conread position: 261-558
Cow position: chr1:50764374-50764676 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 60

Conread position: 261-562
Cow position: chr1:36646235-36645923 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 286

Conread position: 261-562
Cow position: chr1:56746100-56746417 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 312

Conread position: 261-566
Cow position: chr1:58197222-58196913 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 168, 91

Conread position: 261-569
Cow position: chr1:24781262-24780938 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 17

Conread position: 261-574
Cow position: chr1:7738930-7739254 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 117, 167

Conread position: 261-577
Cow position: chr1:72103332-72103646 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 75

Conread position: 262-489
Cow position: chr1:25178808-25178564 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 123, 0

Conread position: 262-554
Cow position: chr1:2989700-2990009 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 262-554
Cow position: chr1:18698646-18698956 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 262-555
Cow position: chr1:40088592-40088903 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 94

Conread position: 262-563
Cow position: chr1:63239911-63240230 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 74

Conread position: 264-562
Cow position: chr1:79453541-79453227 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 309

Conread position: 268-554
Cow position: chr1:21535039-21534735 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 117, 0

Conread position: 268-562
Cow position: chr1:10033761-10034060 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 294

Conread position: 269-554
Cow position: chr1:11666316-11666015 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 15

Conread position: 270-444
Cow position: chr1:97624837-97624657 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 270-555
Cow position: chr1:16117174-16116872 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 274-554
Cow position: chr1:17248434-17248137 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 274-554
Cow position: chr1:72590135-72589838 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 276-562
Cow position: chr1:52434256-52434555 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 230

Conread position: 277-554
Cow position: chr1:46930710-46930428 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 109

Conread position: 277-554
Cow position: chr1:81308593-81308887 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 277-571
Cow position: chr1:71044742-71045044 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 101, 37

Conread position: 278-549
Cow position: chr1:93112114-93111829 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 229

Conread position: 281-477
Cow position: chr1:22730333-22730123 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 102, 46

Conread position: 285-553
Cow position: chr1:68950647-68950930 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 93, 204

Conread position: 285-594
Cow position: chr1:22253313-22253643 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 272

Conread position: 291-562
Cow position: chr1:3263235-3263522 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 94, 282

Conread position: 292-554
Cow position: chr1:5163094-5162813 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 293-524
Cow position: chr1:21165015-21165265 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 293-554
Cow position: chr1:19828731-19828458 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 92, 0

Conread position: 293-554
Cow position: chr1:84448872-84449151 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 299-554
Cow position: chr1:92196232-92196502 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 65, 7

Conread position: 301-553
Cow position: chr1:5013542-5013273 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 64, 0

Conread position: 301-554
Cow position: chr1:52510858-52510592 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 85, 41

Conread position: 301-555
Cow position: chr1:42739952-42740223 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 84, 0

Conread position: 301-566
Cow position: chr1:26838211-26838484 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 79, 232

Conread position: 303-554
Cow position: chr1:66144958-66145226 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 82, 0

Conread position: 306-554
Cow position: chr1:82567678-82567938 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 79, 13

Conread position: 308-522
Cow position: chr1:22909132-22909359 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 209

Conread position: 310-562
Cow position: chr1:56191153-56190886 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 262

Conread position: 311-540
Cow position: chr1:83060375-83060130 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 74, 114

Conread position: 311-555
Cow position: chr1:19884636-19884373 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 311-555
Cow position: chr1:21507820-21507561 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 74, 26

Conread position: 311-563
Cow position: chr1:32563269-32563000 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 0

Conread position: 313-570
Cow position: chr1:101982228-101981966 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 44, 207

Conread position: 315-489
Cow position: chr1:16372543-16372734 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 315-554
Cow position: chr1:7415756-7416011 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 315-554
Cow position: chr1:59202957-59202700 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 318-554
Cow position: chr1:30281551-30281299 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 189

Conread position: 319-554
Cow position: chr1:74513869-74513617 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 321-555
Cow position: chr1:78290834-78291084 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 322-531
Cow position: chr1:42554282-42554507 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 323-562
Cow position: chr1:90622946-90622700 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 142

Conread position: 323-570
Cow position: chr1:28176034-28176295 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 324-562
Cow position: chr1:44079139-44078888 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 54, 18

Conread position: 328-562
Cow position: chr1:23117923-23117675 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 35

Conread position: 328-563
Cow position: chr1:19056156-19056407 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 236

Conread position: 329-552
Cow position: chr1:9377087-9376855 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 108

Conread position: 330-562
Cow position: chr1:20146700-20146946 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 332-507
Cow position: chr1:82860542-82860723 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 24

Conread position: 332-572
Cow position: chr1:33392305-33392564 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 218

Conread position: 336-562
Cow position: chr1:4452796-4452551 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 183

Conread position: 336-562
Cow position: chr1:99838060-99837818 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 44, 237

Conread position: 336-568
Cow position: chr1:101008562-101008317 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 181

Conread position: 336-588
Cow position: chr1:61282713-61282982 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 25, 199

Conread position: 337-561
Cow position: chr1:7746233-7746464 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 338-555
Cow position: chr1:4515431-4515202 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 181

Conread position: 338-594
Cow position: chr1:4646241-4645971 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 181

Conread position: 342-562
Cow position: chr1:101974111-101973874 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 23, 232

Conread position: 343-554
Cow position: chr1:15463151-15463377 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 146

Conread position: 344-555
Cow position: chr1:97076202-97075974 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 359-554
Cow position: chr1:7196679-7196880 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 24

Conread position: 360-561
Cow position: chr1:57635932-57636149 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 363-554
Cow position: chr1:73434174-73433978 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 87, 23

Conread position: 376-554
Cow position: chr1:21080099-21079914 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 378-521
Cow position: chr1:40061565-40061714 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 130

Conread position: 378-552
Cow position: chr1:52508278-52508098 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 378-554
Cow position: chr1:20849189-20849005 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 378-563
Cow position: chr1:72114483-72114675 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 378-564
Cow position: chr1:31238846-31238649 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 379-525
Cow position: chr1:44137480-44137327 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 381-555
Cow position: chr1:82163451-82163270 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 383-572
Cow position: chr1:66242713-66242517 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 384-548
Cow position: chr1:23658721-23658550 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 384-562
Cow position: chr1:53371715-53371903 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 386-524
Cow position: chr1:99106066-99105922 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 386-540
Cow position: chr1:70069060-70068899 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 386-552
Cow position: chr1:56475351-56475520 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 30

Conread position: 386-554
Cow position: chr1:3440314-3440488 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 48

Conread position: 386-554
Cow position: chr1:3932289-3932114 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr1:4208148-4207973 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr1:8845007-8845182 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr1:10364917-10365092 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr1:19793054-19793228 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 386-554
Cow position: chr1:22727652-22727827 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 386-554
Cow position: chr1:32795552-32795727 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chr1:34392510-34392334 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 386-554
Cow position: chr1:52380795-52380970 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr1:66369042-66368867 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr1:71081492-71081317 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chr1:84893913-84894088 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 63, 154

Conread position: 386-555
Cow position: chr1:98559264-98559440 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 386-557
Cow position: chr1:31515763-31515586 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 63, 158

Conread position: 386-562
Cow position: chr1:12057898-12057719 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 112

Conread position: 386-562
Cow position: chr1:81320976-81320794 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 121

Conread position: 386-563
Cow position: chr1:9438940-9438757 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 122

Conread position: 386-569
Cow position: chr1:24922158-24921970 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 90

Conread position: 386-582
Cow position: chr1:24202796-24202599 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 144

Conread position: 387-554
Cow position: chr1:41736523-41736349 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 387-555
Cow position: chr1:95766028-95765850 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 388-566
Cow position: chr1:78796720-78796538 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 143

Conread position: 391-554
Cow position: chr1:15743176-15743346 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 394-566
Cow position: chr1:76700385-76700206 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 396-554
Cow position: chr1:17436040-17435876 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 90

Conread position: 405-566
Cow position: chr1:81362650-81362814 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 121

Conread position: 408-562
Cow position: chr1:38478984-38479144 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 155

Show alignments to all cow chromosomes.