Cow genome map

Conread name: rpigcb_7632.y1

Conread position: 16-554
Cow position:
Alignm length: 568
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 56

Conread position: 51-555
Cow position:
Alignm length: 535
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 91

Conread position: 56-554
Cow position:
Alignm length: 523
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 16

Conread position: 58-532
Cow position:
Alignm length: 502
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 42

Conread position: 60-486
Cow position:
Alignm length: 445
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 12

Conread position: 60-562
Cow position:
Alignm length: 533
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 61-454
Cow position:
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 11

Conread position: 61-486
Cow position:
Alignm length: 456
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 11

Conread position: 61-502
Cow position:
Alignm length: 466
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 12

Conread position: 61-505
Cow position:
Alignm length: 475
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-518
Cow position:
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 12

Conread position: 61-522
Cow position:
Alignm length: 484
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 11

Conread position: 61-525
Cow position:
Alignm length: 510
Alignm identity: 347
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position:
Alignm length: 510
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position:
Alignm length: 511
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 15

Conread position: 61-540
Cow position:
Alignm length: 511
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 11

Conread position: 61-550
Cow position:
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 11

Conread position: 61-553
Cow position:
Alignm length: 516
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-553
Cow position:
Alignm length: 526
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position:
Alignm length: 516
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 533
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 525
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 523
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 525
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 514
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 525
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 525
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-554
Cow position:
Alignm length: 528
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 11

Conread position: 61-554
Cow position:
Alignm length: 521
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 11

Conread position: 61-554
Cow position:
Alignm length: 522
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 11

Conread position: 61-554
Cow position:
Alignm length: 520
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-558
Cow position:
Alignm length: 528
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position:
Alignm length: 525
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position:
Alignm length: 530
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-562
Cow position:
Alignm length: 532
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position:
Alignm length: 529
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 11

Conread position: 61-562
Cow position:
Alignm length: 531
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-562
Cow position:
Alignm length: 532
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-563
Cow position:
Alignm length: 536
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-563
Cow position:
Alignm length: 532
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 11

Conread position: 61-570
Cow position:
Alignm length: 543
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 62-457
Cow position:
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 10

Conread position: 62-532
Cow position:
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 294

Conread position: 62-554
Cow position:
Alignm length: 528
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 62-562
Cow position:
Alignm length: 532
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 10

Conread position: 62-562
Cow position:
Alignm length: 521
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-566
Cow position:
Alignm length: 535
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 10

Conread position: 63-554
Cow position:
Alignm length: 523
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-554
Cow position:
Alignm length: 522
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-555
Cow position:
Alignm length: 523
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 9

Conread position: 72-513
Cow position:
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 148

Conread position: 72-554
Cow position:
Alignm length: 515
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 263

Conread position: 72-562
Cow position:
Alignm length: 521
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 152

Conread position: 72-563
Cow position:
Alignm length: 522
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 514

Conread position: 72-563
Cow position:
Alignm length: 530
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 128

Conread position: 74-563
Cow position:
Alignm length: 521
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 61

Conread position: 75-562
Cow position:
Alignm length: 519
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 149

Conread position: 76-554
Cow position:
Alignm length: 509
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 273

Conread position: 77-441
Cow position:
Alignm length: 388
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 65

Conread position: 82-554
Cow position:
Alignm length: 487
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 29

Conread position: 85-529
Cow position:
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 16

Conread position: 85-562
Cow position:
Alignm length: 503
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 106

Conread position: 89-556
Cow position:
Alignm length: 510
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 12

Conread position: 92-553
Cow position:
Alignm length: 494
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 101

Conread position: 97-540
Cow position:
Alignm length: 474
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 97-554
Cow position:
Alignm length: 488
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 252

Conread position: 98-562
Cow position:
Alignm length: 496
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 111

Conread position: 104-517
Cow position:
Alignm length: 443
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 109-554
Cow position:
Alignm length: 476
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 110-554
Cow position:
Alignm length: 475
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 110-567
Cow position:
Alignm length: 488
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 476

Conread position: 120-554
Cow position:
Alignm length: 465
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 217

Conread position: 121-524
Cow position:
Alignm length: 434
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 133-554
Cow position:
Alignm length: 452
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 139-554
Cow position:
Alignm length: 446
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 432

Conread position: 148-523
Cow position:
Alignm length: 403
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 148-529
Cow position:
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 393

Conread position: 148-554
Cow position:
Alignm length: 434
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 148-554
Cow position:
Alignm length: 434
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 150-524
Cow position:
Alignm length: 402
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 153-554
Cow position:
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 153-562
Cow position:
Alignm length: 438
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 431

Conread position: 162-554
Cow position:
Alignm length: 410
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 103

Conread position: 164-452
Cow position:
Alignm length: 300
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 213, 101

Conread position: 170-563
Cow position:
Alignm length: 407
Alignm identity: 261
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 136, 75

Conread position: 194-554
Cow position:
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 199-489
Cow position:
Alignm length: 321
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 135

Conread position: 200-554
Cow position:
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 145

Conread position: 204-553
Cow position:
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 141

Conread position: 206-532
Cow position:
Alignm length: 353
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 206-578
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 29

Conread position: 206-588
Cow position:
Alignm length: 407
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 141

Conread position: 221-452
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 153, 46

Conread position: 222-554
Cow position:
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 124

Conread position: 227-554
Cow position:
Alignm length: 345
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 252-498
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 133, 0

Conread position: 252-552
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 31

Conread position: 253-451
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 39

Conread position: 253-518
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 93, 30

Conread position: 253-519
Cow position:
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 248

Conread position: 253-539
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 253-554
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 257-555
Cow position:
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 10

Conread position: 259-552
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 126, 65

Conread position: 261-553
Cow position:
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 261-554
Cow position:
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 290

Conread position: 261-555
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 263-554
Cow position:
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 270-441
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 115, 0

Conread position: 270-464
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 115, 0

Conread position: 274-569
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 102, 84

Conread position: 284-562
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 280

Conread position: 286-554
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 69

Conread position: 293-532
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 18

Conread position: 293-554
Cow position:
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 293-562
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 92, 15

Conread position: 308-562
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 241

Conread position: 312-554
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 73, 0

Conread position: 324-554
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 327-553
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 327-569
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 93

Conread position: 335-554
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 338-553
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 73

Conread position: 346-563
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 378-532
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 72

Conread position: 378-554
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 386-524
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 386-540
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 386-554
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 394-554
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 397-554
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 124

Conread position: 405-566
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 111

Show alignments to all cow chromosomes.