Cow genome map


           Conread name:
           rpigcb_7632.y1
        

               Conread position:
               47-517
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 322
               

               Conread position:
               53-554
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               53-554
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 193
               

               Conread position:
               53-554
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 48
               

               Conread position:
               57-562
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 519
               

               Conread position:
               58-584
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 56
               

               Conread position:
               59-566
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               60-539
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 12
               

               Conread position:
               60-554
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               60-569
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 12
               

               Conread position:
               61-416
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               61-424
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-441
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-446
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 11
               

               Conread position:
               61-446
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               61-454
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               61-485
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               61-495
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 11
               

               Conread position:
               61-497
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               61-501
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-516
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-517
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               61-524
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 11
               

               Conread position:
               61-524
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 11
               

               Conread position:
               61-524
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 11
               

               Conread position:
               61-535
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               61-537
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               61-540
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-540
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-553
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               61-553
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-554
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-555
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 11
               

               Conread position:
               61-555
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-555
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-555
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 11
               

               Conread position:
               61-558
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 12
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               61-562
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-563
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-563
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 11
               

               Conread position:
               61-563
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-566
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               61-570
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 266
               

               Conread position:
               62-566
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 10
               

               Conread position:
               63-489
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 10
               

               Conread position:
               63-562
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 9
               

               Conread position:
               69-554
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               72-448
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               72-518
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               301
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               72-562
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 283
               

               Conread position:
               72-562
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 144
               

               Conread position:
               72-562
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 148
               

               Conread position:
               72-569
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 467
               

               Conread position:
               73-552
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 249
               

               Conread position:
               73-553
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               325
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               81, 100
               

               Conread position:
               73-557
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 38
               

               Conread position:
               73-562
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 497
               

               Conread position:
               76-518
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               74, 51
               

               Conread position:
               76-553
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               76-565
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 500
               

               Conread position:
               77-553
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               78-563
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 68
               

               Conread position:
               80-554
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               84-427
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 89
               

               Conread position:
               84-563
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 502
               

               Conread position:
               89-562
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 41
               

               Conread position:
               92-556
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 40
               

               Conread position:
               94-570
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 194
               

               Conread position:
               96-562
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 218
               

               Conread position:
               105-554
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               105-569
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 85
               

               Conread position:
               106-532
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               110-554
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               111-477
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               113-592
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 200
               

               Conread position:
               116-553
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 218
               

               Conread position:
               124-451
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 237
               

               Conread position:
               126-489
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               130-528
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               25, 215
               

               Conread position:
               131-554
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 403
               

               Conread position:
               136-554
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 186
               

               Conread position:
               136-566
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               148-552
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 99
               

               Conread position:
               148-554
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               148-562
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 387
               

               Conread position:
               155-566
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 346
               

               Conread position:
               160-562
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 67
               

               Conread position:
               162-555
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 169
               

               Conread position:
               162-562
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               164-554
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 365
               

               Conread position:
               170-487
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               105, 26
               

               Conread position:
               181-554
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               181-554
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               189-562
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 394
               

               Conread position:
               191-557
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 152
               

               Conread position:
               192-553
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               196-562
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 49
               

               Conread position:
               204-566
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               208-562
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               264
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               211-514
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 100
               

               Conread position:
               216-562
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               218-513
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               223-566
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 353
               

               Conread position:
               230-577
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 189
               

               Conread position:
               233-553
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               233-566
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 284
               

               Conread position:
               238-554
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 13
               

               Conread position:
               253-554
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               253-554
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               253-555
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 82
               

               Conread position:
               253-562
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 323
               

               Conread position:
               253-566
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 111
               

               Conread position:
               254-424
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               131, 73
               

               Conread position:
               254-554
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 101
               

               Conread position:
               257-562
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 11
               

               Conread position:
               260-563
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               117, 15
               

               Conread position:
               261-435
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               261-489
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               85, 156
               

               Conread position:
               261-525
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               55, 191
               

               Conread position:
               261-554
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               261-562
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 310
               

               Conread position:
               261-563
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               263-554
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               264-554
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               266-553
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               266-554
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 203
               

               Conread position:
               269-562
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 38
               

               Conread position:
               277-560
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 90
               

               Conread position:
               277-562
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 280
               

               Conread position:
               278-554
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 163
               

               Conread position:
               279-457
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               284-524
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 52
               

               Conread position:
               284-569
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 165
               

               Conread position:
               289-555
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               290-554
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               305-554
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               305-554
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               305-555
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               324-562
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               55, 249
               

               Conread position:
               325-555
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               327-518
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               327-554
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               328-571
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               50, 242
               

               Conread position:
               331-555
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               333-554
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               53, 90
               

               Conread position:
               338-554
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               340-554
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               366-569
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 139
               

               Conread position:
               384-553
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               384-562
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 180
               

               Conread position:
               386-524
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               386-532
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               386-554
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               386-554
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               386-554
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               386-554
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               386-554
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               386-554
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               386-554
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               386-555
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               386-557
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               386-562
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               386-562
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               386-562
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               386-562
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               386-564
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               67, 109
               

               Conread position:
               386-566
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               386-569
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               386-569
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               386-569
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 81
               

               Conread position:
               387-553
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               387-563
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               49, 78
               

               Conread position:
               392-524
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 93
               

               Conread position:
               398-555
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               406-563
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               412-555
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               36, 72
               
Show alignments to all cow chromosomes.