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Cow genome map

           
Conread name:
           
rpigcb_7632.y1
        

               
Conread position:
               
47-517
               

               
Cow position:
               
chr14:47567558-47568060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 322
               

               
Conread position:
               
53-554
               

               
Cow position:
               
chr14:8397176-8396646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
53-554
               

               
Cow position:
               
chr14:29773524-29773008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 193
               

               
Conread position:
               
53-554
               

               
Cow position:
               
chr14:39822479-39821953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
57-562
               

               
Cow position:
               
chr14:12902941-12903474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 519
               

               
Conread position:
               
58-584
               

               
Cow position:
               
chr14:35382864-35382331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
59-566
               

               
Cow position:
               
chr14:43560815-43561337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
60-539
               

               
Cow position:
               
chr14:35419492-35419986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
60-554
               

               
Cow position:
               
chr14:17762775-17762254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
60-569
               

               
Cow position:
               
chr14:8103057-8102528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
61-416
               

               
Cow position:
               
chr14:45789589-45789950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
61-424
               

               
Cow position:
               
chr14:37226785-37227170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-441
               

               
Cow position:
               
chr14:13683178-13683580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-446
               

               
Cow position:
               
chr14:748987-748579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
61-446
               

               
Cow position:
               
chr14:19549807-19550212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
61-454
               

               
Cow position:
               
chr14:50144838-50145256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
61-485
               

               
Cow position:
               
chr14:48491179-48491627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
61-495
               

               
Cow position:
               
chr14:16997427-16996963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
61-497
               

               
Cow position:
               
chr14:16917114-16916650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
61-501
               

               
Cow position:
               
chr14:44077074-44076605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-516
               

               
Cow position:
               
chr14:19418706-19419190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-517
               

               
Cow position:
               
chr14:21541297-21540822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
61-524
               

               
Cow position:
               
chr14:9449917-9449428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 11
               

               
Conread position:
               
61-524
               

               
Cow position:
               
chr14:46636920-46636437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 11
               

               
Conread position:
               
61-524
               

               
Cow position:
               
chr14:49328586-49329076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 11
               

               
Conread position:
               
61-535
               

               
Cow position:
               
chr14:12859026-12858522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
61-537
               

               
Cow position:
               
chr14:30593648-30593156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
61-540
               

               
Cow position:
               
chr14:9047450-9047952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-540
               

               
Cow position:
               
chr14:12545276-12545788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-553
               

               
Cow position:
               
chr14:34394350-34394866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
61-553
               

               
Cow position:
               
chr14:38459540-38459022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:2288865-2289381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:5645018-5645542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:9811293-9811814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:11462468-11461946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:13369839-13370359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:15337021-15336499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:17757427-17756935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:23254726-23254210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:28351086-28350564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:29045061-29044539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:30738265-30738783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:34167914-34168432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:34629590-34629061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:38238484-38237962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:38435645-38436158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:40968767-40969289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:42259083-42259595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:46959999-46960521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-554
               

               
Cow position:
               
chr14:50069580-50069064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-555
               

               
Cow position:
               
chr14:22027160-22026640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
61-555
               

               
Cow position:
               
chr14:32584413-32583897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-555
               

               
Cow position:
               
chr14:41445617-41446146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-555
               

               
Cow position:
               
chr14:45739708-45739190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
61-558
               

               
Cow position:
               
chr14:44554472-44554979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 12
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:1726759-1727285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:8517127-8517650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:10310167-10310700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:13308344-13308872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:13860929-13860395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:17689741-17690261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:19489594-19490123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:27040771-27040245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:32449581-32450097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:34674713-34675239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:44293246-44293758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:44691785-44692290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr14:46302517-46303046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-563
               

               
Cow position:
               
chr14:8998227-8998751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-563
               

               
Cow position:
               
chr14:15272649-15272118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
61-563
               

               
Cow position:
               
chr14:50136884-50137410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-566
               

               
Cow position:
               
chr14:12740437-12739904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
61-570
               

               
Cow position:
               
chr14:21200533-21201071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 266
               

               
Conread position:
               
62-566
               

               
Cow position:
               
chr14:44027203-44026671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
63-489
               

               
Cow position:
               
chr14:29726495-29726940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
63-562
               

               
Cow position:
               
chr14:11151302-11150775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
69-554
               

               
Cow position:
               
chr14:13581488-13582003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
72-448
               

               
Cow position:
               
chr14:8900653-8900252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
72-518
               

               
Cow position:
               
chr14:18322573-18323040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
72-562
               

               
Cow position:
               
chr14:30476719-30476203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 283
               

               
Conread position:
               
72-562
               

               
Cow position:
               
chr14:34906148-34906666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
72-562
               

               
Cow position:
               
chr14:45026005-45025488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 148
               

               
Conread position:
               
72-569
               

               
Cow position:
               
chr14:41478371-41478889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 467
               

               
Conread position:
               
73-552
               

               
Cow position:
               
chr14:30665303-30664801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 249
               

               
Conread position:
               
73-553
               

               
Cow position:
               
chr14:49218961-49219465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
73-557
               

               
Cow position:
               
chr14:38405600-38406122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
73-562
               

               
Cow position:
               
chr14:7475480-7475997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 497
               

               
Conread position:
               
76-518
               

               
Cow position:
               
chr14:30659838-30659381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
76-553
               

               
Cow position:
               
chr14:44367303-44367810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
76-565
               

               
Cow position:
               
chr14:24836428-24836954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 500
               

               
Conread position:
               
77-553
               

               
Cow position:
               
chr14:26497148-26496638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
78-563
               

               
Cow position:
               
chr14:7646753-7647257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 68
               

               
Conread position:
               
80-554
               

               
Cow position:
               
chr14:8924726-8925230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
84-427
               

               
Cow position:
               
chr14:36288935-36289298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
84-563
               

               
Cow position:
               
chr14:17488705-17488197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 502
               

               
Conread position:
               
89-562
               

               
Cow position:
               
chr14:12483045-12483539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
92-556
               

               
Cow position:
               
chr14:35497183-35497655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 40
               

               
Conread position:
               
94-570
               

               
Cow position:
               
chr14:26449874-26449378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 194
               

               
Conread position:
               
96-562
               

               
Cow position:
               
chr14:22690249-22689754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 218
               

               
Conread position:
               
105-554
               

               
Cow position:
               
chr14:48572703-48572220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
105-569
               

               
Cow position:
               
chr14:28116713-28117206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
106-532
               

               
Cow position:
               
chr14:31400825-31400376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
110-554
               

               
Cow position:
               
chr14:31289519-31289992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
111-477
               

               
Cow position:
               
chr14:35016020-35016416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
113-592
               

               
Cow position:
               
chr14:423850-424351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 200
               

               
Conread position:
               
116-553
               

               
Cow position:
               
chr14:49995877-49995412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 218
               

               
Conread position:
               
124-451
               

               
Cow position:
               
chr14:21596736-21596409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 237
               

               
Conread position:
               
126-489
               

               
Cow position:
               
chr14:25684111-25683729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
130-528
               

               
Cow position:
               
chr14:13415971-13416386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 215
               

               
Conread position:
               
131-554
               

               
Cow position:
               
chr14:31155506-31155959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 403
               

               
Conread position:
               
136-554
               

               
Cow position:
               
chr14:30663349-30662903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 186
               

               
Conread position:
               
136-566
               

               
Cow position:
               
chr14:42626989-42626534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
148-552
               

               
Cow position:
               
chr14:41220347-41219916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 99
               

               
Conread position:
               
148-554
               

               
Cow position:
               
chr14:38651612-38652045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
148-562
               

               
Cow position:
               
chr14:28993647-28993212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 387
               

               
Conread position:
               
155-566
               

               
Cow position:
               
chr14:33835302-33834864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 346
               

               
Conread position:
               
160-562
               

               
Cow position:
               
chr14:12833565-12833991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
162-555
               

               
Cow position:
               
chr14:192865-193284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 169
               

               
Conread position:
               
162-562
               

               
Cow position:
               
chr14:44381999-44382419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
164-554
               

               
Cow position:
               
chr14:9482668-9483081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 365
               

               
Conread position:
               
170-487
               

               
Cow position:
               
chr14:43566857-43567188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
181-554
               

               
Cow position:
               
chr14:5500662-5501061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
181-554
               

               
Cow position:
               
chr14:40483728-40483328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
189-562
               

               
Cow position:
               
chr14:24980289-24980688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 394
               

               
Conread position:
               
191-557
               

               
Cow position:
               
chr14:446524-446149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 152
               

               
Conread position:
               
192-553
               

               
Cow position:
               
chr14:14271102-14271490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
196-562
               

               
Cow position:
               
chr14:41212288-41211929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 49
               

               
Conread position:
               
204-566
               

               
Cow position:
               
chr14:45847916-45848302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
208-562
               

               
Cow position:
               
chr14:10542116-10541754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
211-514
               

               
Cow position:
               
chr14:28211724-28212047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
216-562
               

               
Cow position:
               
chr14:32472131-32471761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 130
               

               
Conread position:
               
218-513
               

               
Cow position:
               
chr14:24797919-24797597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
223-566
               

               
Cow position:
               
chr14:28796801-28796442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 353
               

               
Conread position:
               
230-577
               

               
Cow position:
               
chr14:7812464-7812817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 189
               

               
Conread position:
               
233-553
               

               
Cow position:
               
chr14:33713788-33714110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
233-566
               

               
Cow position:
               
chr14:45084711-45085056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 284
               

               
Conread position:
               
238-554
               

               
Cow position:
               
chr14:31736783-31737113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 13
               

               
Conread position:
               
253-554
               

               
Cow position:
               
chr14:26129366-26129046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
253-554
               

               
Cow position:
               
chr14:34763545-34763863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
253-555
               

               
Cow position:
               
chr14:46849224-46848911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 82
               

               
Conread position:
               
253-562
               

               
Cow position:
               
chr14:12066632-12066307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 323
               

               
Conread position:
               
253-566
               

               
Cow position:
               
chr14:37882809-37883144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 111
               

               
Conread position:
               
254-424
               

               
Cow position:
               
chr14:21455549-21455728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
131, 73
               

               
Conread position:
               
254-554
               

               
Cow position:
               
chr14:50142206-50141890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 101
               

               
Conread position:
               
257-562
               

               
Cow position:
               
chr14:41081822-41081501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
260-563
               

               
Cow position:
               
chr14:42849778-42849460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
261-435
               

               
Cow position:
               
chr14:46224876-46224690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
261-489
               

               
Cow position:
               
chr14:13559987-13560227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
85, 156
               

               
Conread position:
               
261-525
               

               
Cow position:
               
chr14:48828041-48828329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 191
               

               
Conread position:
               
261-554
               

               
Cow position:
               
chr14:19523876-19524186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
261-562
               

               
Cow position:
               
chr14:20786208-20786523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 310
               

               
Conread position:
               
261-563
               

               
Cow position:
               
chr14:38047004-38047323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
263-554
               

               
Cow position:
               
chr14:13104767-13105075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
264-554
               

               
Cow position:
               
chr14:47873297-47872990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
266-553
               

               
Cow position:
               
chr14:37443797-37444101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
266-554
               

               
Cow position:
               
chr14:32500001-32500295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 203
               

               
Conread position:
               
269-562
               

               
Cow position:
               
chr14:34668017-34667709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
277-560
               

               
Cow position:
               
chr14:38391084-38391383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 90
               

               
Conread position:
               
277-562
               

               
Cow position:
               
chr14:34354390-34354689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 280
               

               
Conread position:
               
278-554
               

               
Cow position:
               
chr14:34370374-34370666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 163
               

               
Conread position:
               
279-457
               

               
Cow position:
               
chr14:33679960-33680148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
284-524
               

               
Cow position:
               
chr14:21727872-21728127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
284-569
               

               
Cow position:
               
chr14:17219170-17219468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 165
               

               
Conread position:
               
289-555
               

               
Cow position:
               
chr14:14786464-14786182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
290-554
               

               
Cow position:
               
chr14:24895524-24895805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
305-554
               

               
Cow position:
               
chr14:18496856-18497111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
305-554
               

               
Cow position:
               
chr14:19317707-19317974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
305-555
               

               
Cow position:
               
chr14:33772847-33773107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
324-562
               

               
Cow position:
               
chr14:45278076-45278330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
55, 249
               

               
Conread position:
               
325-555
               

               
Cow position:
               
chr14:38016438-38016685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
327-518
               

               
Cow position:
               
chr14:37335086-37334879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
327-554
               

               
Cow position:
               
chr14:4916897-4916653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
328-571
               

               
Cow position:
               
chr14:23215094-23215350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 242
               

               
Conread position:
               
331-555
               

               
Cow position:
               
chr14:5379053-5379292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
333-554
               

               
Cow position:
               
chr14:45299825-45300056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
338-554
               

               
Cow position:
               
chr14:40229628-40229851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
340-554
               

               
Cow position:
               
chr14:50121931-50122159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
366-569
               

               
Cow position:
               
chr14:46375272-46375057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 139
               

               
Conread position:
               
384-553
               

               
Cow position:
               
chr14:40346216-40346392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
384-562
               

               
Cow position:
               
chr14:13276037-13276219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 180
               

               
Conread position:
               
386-524
               

               
Cow position:
               
chr14:32277559-32277414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
386-532
               

               
Cow position:
               
chr14:9538080-9538233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
386-554
               

               
Cow position:
               
chr14:403123-403299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
386-554
               

               
Cow position:
               
chr14:5113182-5113007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
386-554
               

               
Cow position:
               
chr14:10349902-10349727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
386-554
               

               
Cow position:
               
chr14:21765158-21765333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
386-554
               

               
Cow position:
               
chr14:22612743-22612568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
386-554
               

               
Cow position:
               
chr14:24973666-24973491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
386-554
               

               
Cow position:
               
chr14:47486496-47486321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
386-555
               

               
Cow position:
               
chr14:46125506-46125682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
386-557
               

               
Cow position:
               
chr14:46489311-46489491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
386-562
               

               
Cow position:
               
chr14:1802161-1802337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
386-562
               

               
Cow position:
               
chr14:19324372-19324205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
386-562
               

               
Cow position:
               
chr14:35588642-35588826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
386-562
               

               
Cow position:
               
chr14:38380225-38380051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
386-564
               

               
Cow position:
               
chr14:46967309-46967130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
386-566
               

               
Cow position:
               
chr14:29897980-29898167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
386-569
               

               
Cow position:
               
chr14:8495964-8495779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
386-569
               

               
Cow position:
               
chr14:20467094-20467285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
386-569
               

               
Cow position:
               
chr14:37677340-37677528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
387-553
               

               
Cow position:
               
chr14:39433317-39433490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
387-563
               

               
Cow position:
               
chr14:18811180-18811360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
392-524
               

               
Cow position:
               
chr14:43299684-43299820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
398-555
               

               
Cow position:
               
chr14:13386312-13386148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
406-563
               

               
Cow position:
               
chr14:13464322-13464485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
412-555
               

               
Cow position:
               
chr14:38143209-38143356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
36, 72
               
Show alignments to all cow chromosomes.