Cow genome map

Conread name: rpigcb_7632.y1

Conread position: 26-554
Cow position: chr20:14925657-14925100 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 46

Conread position: 42-555
Cow position: chr20:22222603-22222063 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 31

Conread position: 44-551
Cow position: chr20:32351605-32352134 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 29

Conread position: 55-435
Cow position: chr20:20982771-20983153 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 252
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 98, 122

Conread position: 57-586
Cow position: chr20:16106464-16107022 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 15

Conread position: 59-555
Cow position: chr20:6476538-6477034 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 13

Conread position: 60-554
Cow position: chr20:8970873-8970363 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 12

Conread position: 61-427
Cow position: chr20:38957158-38957546 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-441
Cow position: chr20:7810820-7810420 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-441
Cow position: chr20:10790476-10790876 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-464
Cow position: chr20:20092319-20092745 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-486
Cow position: chr20:30578883-30579337 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-495
Cow position: chr20:13506538-13506079 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-501
Cow position: chr20:5086317-5085848 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-510
Cow position: chr20:13765913-13766389 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-511
Cow position: chr20:34643030-34643508 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 11

Conread position: 61-522
Cow position: chr20:28724776-28725268 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-524
Cow position: chr20:34231836-34231358 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chr20:18092881-18092374 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 15

Conread position: 61-553
Cow position: chr20:14757236-14756715 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 11

Conread position: 61-553
Cow position: chr20:15090355-15089831 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-553
Cow position: chr20:25659001-25658483 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position: chr20:774678-775200 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr20:825800-826322 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr20:5503727-5503205 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr20:6135969-6135449 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr20:8445433-8445954 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position: chr20:20439950-20439427 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position: chr20:22048386-22048908 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr20:28444328-28443807 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position: chr20:30146455-30146973 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr20:30431292-30431821 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr20:31504350-31504875 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr20:10921901-10921383 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-555
Cow position: chr20:22208642-22209164 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr20:24399845-24399322 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-560
Cow position: chr20:31846812-31846283 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 11

Conread position: 61-562
Cow position: chr20:3782685-3782153 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 8

Conread position: 61-562
Cow position: chr20:7597837-7597313 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr20:9339047-9339562 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 11

Conread position: 61-562
Cow position: chr20:10404722-10405243 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 11

Conread position: 61-562
Cow position: chr20:12435375-12434851 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr20:12568296-12567771 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr20:15067837-15068369 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 11

Conread position: 61-562
Cow position: chr20:15116829-15117356 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 61-562
Cow position: chr20:15526765-15527294 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr20:17658212-17657683 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-562
Cow position: chr20:23466630-23466101 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr20:28560864-28560345 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-563
Cow position: chr20:21719578-21720103 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-566
Cow position: chr20:18489966-18490502 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 11

Conread position: 61-569
Cow position: chr20:14867363-14866831 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-571
Cow position: chr20:12047516-12048038 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 62-532
Cow position: chr20:10685760-10686249 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 10

Conread position: 62-554
Cow position: chr20:16515372-16515865 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 10

Conread position: 62-566
Cow position: chr20:21397839-21398370 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 282

Conread position: 62-569
Cow position: chr20:10035704-10035191 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 27

Conread position: 63-427
Cow position: chr20:39234253-39234639 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 9

Conread position: 63-524
Cow position: chr20:19018382-19017900 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-524
Cow position: chr20:19844798-19845287 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 145

Conread position: 63-562
Cow position: chr20:20731276-20731808 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 9

Conread position: 63-562
Cow position: chr20:27876501-27877032 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 450

Conread position: 63-566
Cow position: chr20:35093562-35094076 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 9

Conread position: 65-488
Cow position: chr20:3808749-3808297 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 67-554
Cow position: chr20:35844406-35843894 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 54

Conread position: 72-487
Cow position: chr20:35019952-35020386 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 266

Conread position: 72-489
Cow position: chr20:14672368-14672813 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 21

Conread position: 72-522
Cow position: chr20:28482870-28483333 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 98

Conread position: 72-540
Cow position: chr20:24568239-24567744 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 72-554
Cow position: chr20:753468-753983 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 72-554
Cow position: chr20:22061147-22060636 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 492

Conread position: 72-562
Cow position: chr20:6259263-6258751 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 212

Conread position: 72-566
Cow position: chr20:30688905-30689425 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 250

Conread position: 72-569
Cow position: chr20:24904512-24903987 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 51

Conread position: 72-569
Cow position: chr20:28294342-28294876 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 399

Conread position: 73-552
Cow position: chr20:6240103-6239605 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 477

Conread position: 73-554
Cow position: chr20:32165068-32164564 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 146

Conread position: 73-554
Cow position: chr20:35159551-35159049 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 76-553
Cow position: chr20:12332710-12333216 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 127

Conread position: 76-554
Cow position: chr20:28956917-28956409 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 76-562
Cow position: chr20:15295054-15295566 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 57

Conread position: 77-562
Cow position: chr20:5077027-5077504 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 101

Conread position: 79-550
Cow position: chr20:13954669-13955162 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 44

Conread position: 79-562
Cow position: chr20:6550961-6550449 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 507

Conread position: 84-554
Cow position: chr20:16559489-16558990 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 15

Conread position: 85-554
Cow position: chr20:13304252-13303756 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 86-554
Cow position: chr20:30479153-30479651 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 95

Conread position: 89-554
Cow position: chr20:37154923-37154424 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 14

Conread position: 89-566
Cow position: chr20:31220343-31220823 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 262

Conread position: 97-554
Cow position: chr20:29371363-29370879 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 81

Conread position: 102-521
Cow position: chr20:20213986-20214422 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 286
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 73

Conread position: 105-527
Cow position: chr20:8890381-8890821 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 305
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 127

Conread position: 105-555
Cow position: chr20:14211315-14210835 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 224

Conread position: 110-417
Cow position: chr20:32639077-32639409 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 110-563
Cow position: chr20:38000558-38001032 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 239

Conread position: 113-531
Cow position: chr20:40255726-40256181 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 266

Conread position: 122-564
Cow position: chr20:22185931-22185459 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 16

Conread position: 123-562
Cow position: chr20:5269947-5269484 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 55

Conread position: 124-556
Cow position: chr20:9535987-9536439 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 250

Conread position: 130-553
Cow position: chr20:9007708-9007294 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 72

Conread position: 148-554
Cow position: chr20:12177381-12176948 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 150-554
Cow position: chr20:26053242-26052811 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 153-555
Cow position: chr20:15781071-15780654 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 81

Conread position: 155-554
Cow position: chr20:9222968-9223394 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 158-569
Cow position: chr20:19156038-19155605 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 212

Conread position: 164-424
Cow position: chr20:6054230-6053960 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 101, 138

Conread position: 170-554
Cow position: chr20:26737908-26738319 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 185-588
Cow position: chr20:9588922-9589355 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 147

Conread position: 187-555
Cow position: chr20:12156206-12155826 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 27

Conread position: 218-554
Cow position: chr20:11331495-11331132 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 221-566
Cow position: chr20:28113172-28113536 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 98

Conread position: 232-562
Cow position: chr20:19352877-19352529 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 303

Conread position: 249-566
Cow position: chr20:6055504-6055177 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 27

Conread position: 253-524
Cow position: chr20:33247081-33246801 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 258

Conread position: 253-553
Cow position: chr20:3468605-3468918 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 127, 0

Conread position: 253-553
Cow position: chr20:20935906-20935596 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 48

Conread position: 253-566
Cow position: chr20:7995319-7994987 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 315

Conread position: 254-562
Cow position: chr20:23802375-23802699 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 319

Conread position: 261-522
Cow position: chr20:33730988-33731263 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 56

Conread position: 261-529
Cow position: chr20:13050324-13050041 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 122, 78

Conread position: 261-555
Cow position: chr20:37271503-37271813 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 34

Conread position: 261-562
Cow position: chr20:28165080-28165392 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 102

Conread position: 261-566
Cow position: chr20:5958913-5958592 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 312

Conread position: 264-524
Cow position: chr20:14877295-14877570 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 114, 0

Conread position: 269-562
Cow position: chr20:26075797-26076107 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 109, 297

Conread position: 270-552
Cow position: chr20:42254792-42254505 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 108, 52

Conread position: 278-554
Cow position: chr20:7081567-7081274 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 107, 0

Conread position: 282-569
Cow position: chr20:25856428-25856724 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 72

Conread position: 284-554
Cow position: chr20:14327359-14327074 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 40

Conread position: 284-562
Cow position: chr20:34598104-34597812 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 94, 233

Conread position: 295-556
Cow position: chr20:18322291-18322019 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 83, 0

Conread position: 305-562
Cow position: chr20:12694581-12694853 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 72, 29

Conread position: 317-562
Cow position: chr20:11454311-11454052 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 68, 17

Conread position: 319-555
Cow position: chr20:29285318-29285065 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 325-562
Cow position: chr20:10839160-10838914 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 177

Conread position: 329-540
Cow position: chr20:14836487-14836713 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 197

Conread position: 333-566
Cow position: chr20:16526601-16526851 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 0

Conread position: 338-554
Cow position: chr20:36311194-36310961 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 339-553
Cow position: chr20:9700633-9700862 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 340-558
Cow position: chr20:22006535-22006762 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 72

Conread position: 342-562
Cow position: chr20:35037067-35036831 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 231

Conread position: 351-562
Cow position: chr20:35128284-35128512 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 214

Conread position: 382-562
Cow position: chr20:33563780-33563966 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 181

Conread position: 383-553
Cow position: chr20:12996879-12996702 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 129

Conread position: 385-569
Cow position: chr20:21018683-21018874 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 49

Conread position: 386-524
Cow position: chr20:20779418-20779273 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 386-529
Cow position: chr20:35973290-35973140 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 386-540
Cow position: chr20:18549678-18549839 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 386-553
Cow position: chr20:14720990-14720817 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 123

Conread position: 386-554
Cow position: chr20:10099490-10099665 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr20:13619421-13619246 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chr20:28323845-28324020 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chr20:30546714-30546889 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr20:31784946-31784771 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chr20:32451988-32451813 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 386-560
Cow position: chr20:31000565-31000743 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 114

Conread position: 386-561
Cow position: chr20:40423961-40423782 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 42

Conread position: 386-563
Cow position: chr20:9511442-9511268 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 386-569
Cow position: chr20:40781105-40781294 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 168

Conread position: 388-555
Cow position: chr20:21015626-21015453 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 390-553
Cow position: chr20:40587957-40588126 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 60, 13

Conread position: 392-563
Cow position: chr20:17845089-17845266 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 15

Conread position: 396-562
Cow position: chr20:16584378-16584551 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 409-548
Cow position: chr20:6500809-6500955 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Show alignments to all cow chromosomes.