Cow genome map

Conread name: rpigcb_7632.y1

Conread position: 1-554
Cow position:
Alignm length: 587
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 42-554
Cow position:
Alignm length: 542
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 30

Conread position: 49-540
Cow position:
Alignm length: 508
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 81

Conread position: 56-554
Cow position:
Alignm length: 523
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 16

Conread position: 56-554
Cow position:
Alignm length: 529
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 16

Conread position: 56-569
Cow position:
Alignm length: 542
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 16

Conread position: 57-566
Cow position:
Alignm length: 540
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 164

Conread position: 60-562
Cow position:
Alignm length: 528
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 12

Conread position: 61-506
Cow position:
Alignm length: 470
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 11

Conread position: 61-519
Cow position:
Alignm length: 482
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 11

Conread position: 61-522
Cow position:
Alignm length: 492
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-524
Cow position:
Alignm length: 495
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-524
Cow position:
Alignm length: 497
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-552
Cow position:
Alignm length: 523
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-553
Cow position:
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 525
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 61-554
Cow position:
Alignm length: 523
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position:
Alignm length: 498
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 15

Conread position: 61-555
Cow position:
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 61-557
Cow position:
Alignm length: 530
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 61-562
Cow position:
Alignm length: 532
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-562
Cow position:
Alignm length: 527
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position:
Alignm length: 529
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 11

Conread position: 61-562
Cow position:
Alignm length: 532
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position:
Alignm length: 533
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 61-563
Cow position:
Alignm length: 518
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-566
Cow position:
Alignm length: 537
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-566
Cow position:
Alignm length: 539
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 11

Conread position: 61-569
Cow position:
Alignm length: 540
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 62-552
Cow position:
Alignm length: 527
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-562
Cow position:
Alignm length: 527
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-562
Cow position:
Alignm length: 536
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-562
Cow position:
Alignm length: 531
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-562
Cow position:
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 10

Conread position: 62-566
Cow position:
Alignm length: 537
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 10

Conread position: 63-539
Cow position:
Alignm length: 508
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 63-539
Cow position:
Alignm length: 507
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 63-554
Cow position:
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 258

Conread position: 63-554
Cow position:
Alignm length: 506
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 249

Conread position: 63-557
Cow position:
Alignm length: 510
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 10

Conread position: 63-562
Cow position:
Alignm length: 531
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-562
Cow position:
Alignm length: 526
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 314

Conread position: 63-570
Cow position:
Alignm length: 534
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 110

Conread position: 63-585
Cow position:
Alignm length: 540
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 69

Conread position: 65-553
Cow position:
Alignm length: 504
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 7

Conread position: 71-567
Cow position:
Alignm length: 520
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 55

Conread position: 72-457
Cow position:
Alignm length: 417
Alignm identity: 282
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 60

Conread position: 72-524
Cow position:
Alignm length: 475
Alignm identity: 311
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 82, 48

Conread position: 72-532
Cow position:
Alignm length: 491
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 427

Conread position: 72-548
Cow position:
Alignm length: 508
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 499

Conread position: 72-554
Cow position:
Alignm length: 511
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 415

Conread position: 72-562
Cow position:
Alignm length: 525
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 511

Conread position: 72-562
Cow position:
Alignm length: 522
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 515

Conread position: 72-567
Cow position:
Alignm length: 522
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 87

Conread position: 72-572
Cow position:
Alignm length: 533
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 243

Conread position: 73-593
Cow position:
Alignm length: 557
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 46

Conread position: 74-554
Cow position:
Alignm length: 511
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 75-540
Cow position:
Alignm length: 495
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 75-554
Cow position:
Alignm length: 510
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 19

Conread position: 77-518
Cow position:
Alignm length: 466
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 138

Conread position: 79-525
Cow position:
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 265

Conread position: 87-558
Cow position:
Alignm length: 484
Alignm identity: 314
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 29

Conread position: 89-577
Cow position:
Alignm length: 510
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 20

Conread position: 100-555
Cow position:
Alignm length: 477
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 88

Conread position: 100-562
Cow position:
Alignm length: 484
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 85

Conread position: 101-562
Cow position:
Alignm length: 487
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 70

Conread position: 104-527
Cow position:
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 198

Conread position: 116-527
Cow position:
Alignm length: 441
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 112

Conread position: 117-553
Cow position:
Alignm length: 476
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 438

Conread position: 128-553
Cow position:
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 164

Conread position: 128-562
Cow position:
Alignm length: 465
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 14

Conread position: 139-552
Cow position:
Alignm length: 439
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 147-557
Cow position:
Alignm length: 436
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 20

Conread position: 147-563
Cow position:
Alignm length: 447
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 163

Conread position: 148-554
Cow position:
Alignm length: 433
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 40

Conread position: 153-554
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 17

Conread position: 177-554
Cow position:
Alignm length: 405
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 177-562
Cow position:
Alignm length: 412
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 49

Conread position: 178-554
Cow position:
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 151

Conread position: 188-553
Cow position:
Alignm length: 400
Alignm identity: 281
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 114

Conread position: 191-554
Cow position:
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 191-555
Cow position:
Alignm length: 390
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 199-522
Cow position:
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 304

Conread position: 199-554
Cow position:
Alignm length: 386
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 136

Conread position: 199-562
Cow position:
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 388

Conread position: 204-550
Cow position:
Alignm length: 374
Alignm identity: 243
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 79

Conread position: 205-554
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 150

Conread position: 206-554
Cow position:
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 216-562
Cow position:
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 145

Conread position: 218-524
Cow position:
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 218-554
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 253-524
Cow position:
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-554
Cow position:
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 25

Conread position: 253-554
Cow position:
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 253-554
Cow position:
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-554
Cow position:
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 266

Conread position: 253-554
Cow position:
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-562
Cow position:
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 299

Conread position: 253-566
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 320

Conread position: 254-553
Cow position:
Alignm length: 307
Alignm identity: 210
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 6, 38

Conread position: 259-562
Cow position:
Alignm length: 317
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 260

Conread position: 260-554
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 261-519
Cow position:
Alignm length: 275
Alignm identity: 202
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 124, 251

Conread position: 261-554
Cow position:
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 261-558
Cow position:
Alignm length: 321
Alignm identity: 219
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 114, 97

Conread position: 261-562
Cow position:
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 240

Conread position: 261-566
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 35

Conread position: 261-570
Cow position:
Alignm length: 320
Alignm identity: 214
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 117, 21

Conread position: 262-554
Cow position:
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 217

Conread position: 265-554
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 255

Conread position: 270-554
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 49

Conread position: 271-486
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 273-563
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 73, 288

Conread position: 276-562
Cow position:
Alignm length: 304
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 109, 24

Conread position: 301-554
Cow position:
Alignm length: 272
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 75, 0

Conread position: 304-553
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 81, 20

Conread position: 307-540
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 20

Conread position: 310-554
Cow position:
Alignm length: 262
Alignm identity: 195
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 70, 238

Conread position: 325-562
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 125, 9

Conread position: 327-554
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 336-562
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 237

Conread position: 356-527
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 82

Conread position: 375-566
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 182

Conread position: 378-555
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 378-568
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 71, 174

Conread position: 386-540
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 386-554
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 386-555
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 386-555
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 386-562
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 177

Conread position: 386-562
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 178

Conread position: 386-562
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 37

Conread position: 386-562
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 166

Conread position: 386-566
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 64, 160

Conread position: 386-569
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 121

Conread position: 387-554
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 160

Conread position: 387-554
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 160

Conread position: 387-562
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 176

Conread position: 399-552
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 82

Show alignments to all cow chromosomes.