Cow genome map
Conread name: | rpigcb_7632.y1 |
Conread position: | 7-554 |
Cow position: | chr27:8290743-8291314 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 89 |
Conread position: | 60-554 |
Cow position: | chr27:31249196-31249705 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 12 |
Conread position: | 60-588 |
Cow position: | chr27:11434126-11434679 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 12 |
Conread position: | 61-447 |
Cow position: | chr27:9990258-9989843 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 11 |
Conread position: | 61-501 |
Cow position: | chr27:13308595-13309064 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-510 |
Cow position: | chr27:27278677-27279143 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 16 |
Conread position: | 61-522 |
Cow position: | chr27:27045134-27045615 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 16 |
Conread position: | 61-524 |
Cow position: | chr27:1082211-1081720 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-554 |
Cow position: | chr27:165969-165447 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 11 |
Conread position: | 61-554 |
Cow position: | chr27:5913889-5914400 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 11 |
Conread position: | 61-554 |
Cow position: | chr27:5984079-5983557 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-554 |
Cow position: | chr27:8960078-8959543 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-554 |
Cow position: | chr27:10578897-10579416 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 11 |
Conread position: | 61-554 |
Cow position: | chr27:16031446-16030924 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-554 |
Cow position: | chr27:22797706-22797186 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-554 |
Cow position: | chr27:29036418-29035909 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-555 |
Cow position: | chr27:3232583-3232060 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 11 |
Conread position: | 61-555 |
Cow position: | chr27:27291341-27291867 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-562 |
Cow position: | chr27:1536132-1536650 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 11 |
Conread position: | 61-562 |
Cow position: | chr27:2000796-2001325 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 11 |
Conread position: | 61-562 |
Cow position: | chr27:4982323-4982852 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-562 |
Cow position: | chr27:8972395-8972924 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 15 |
Conread position: | 61-562 |
Cow position: | chr27:19523757-19523230 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-562 |
Cow position: | chr27:21451396-21451923 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 11 |
Conread position: | 61-562 |
Cow position: | chr27:26329884-26330412 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-569 |
Cow position: | chr27:8426809-8427338 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 11 |
Conread position: | 61-569 |
Cow position: | chr27:13353257-13353797 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 11 |
Conread position: | 61-569 |
Cow position: | chr27:26784773-26785306 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 15 |
Conread position: | 62-555 |
Cow position: | chr27:25801253-25800737 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 10 |
Conread position: | 62-569 |
Cow position: | chr27:2558039-2557503 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 10 |
Conread position: | 63-571 |
Cow position: | chr27:5925224-5925751 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 371 |
Conread position: | 67-557 |
Cow position: | chr27:15405600-15406098 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 23 |
Conread position: | 69-553 |
Cow position: | chr27:25784795-25784289 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 151 |
Conread position: | 72-424 |
Cow position: | chr27:15543976-15544351 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 72-562 |
Cow position: | chr27:344962-344450 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 233 |
Conread position: | 72-562 |
Cow position: | chr27:8200899-8201415 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 100 |
Conread position: | 75-555 |
Cow position: | chr27:19932598-19932083 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 41 |
Conread position: | 84-562 |
Cow position: | chr27:3990827-3990320 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 502 |
Conread position: | 84-562 |
Cow position: | chr27:19424405-19423898 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 49 |
Conread position: | 86-571 |
Cow position: | chr27:30307293-30306779 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 146 |
Conread position: | 88-562 |
Cow position: | chr27:11480908-11481411 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 498 |
Conread position: | 90-566 |
Cow position: | chr27:14380300-14380787 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 104 |
Conread position: | 94-554 |
Cow position: | chr27:1188649-1189135 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 98-540 |
Cow position: | chr27:14297194-14297666 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 104-554 |
Cow position: | chr27:3653706-3653227 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 106-444 |
Cow position: | chr27:28051784-28051429 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 244 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 159, 62 |
Conread position: | 121-532 |
Cow position: | chr27:8592409-8592837 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 132 |
Conread position: | 131-554 |
Cow position: | chr27:12006168-12006621 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 140-562 |
Cow position: | chr27:22329525-22329970 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 312 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 13, 58 |
Conread position: | 148-554 |
Cow position: | chr27:6524239-6523807 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 300 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 26, 69 |
Conread position: | 152-557 |
Cow position: | chr27:26552337-26551917 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 53 |
Conread position: | 155-447 |
Cow position: | chr27:20001463-20001764 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 169 |
Conread position: | 155-553 |
Cow position: | chr27:13183216-13182813 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 110 |
Conread position: | 163-562 |
Cow position: | chr27:30782960-30783383 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 293 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 98, 29 |
Conread position: | 179-562 |
Cow position: | chr27:14669268-14669671 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 281 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 86, 144 |
Conread position: | 187-562 |
Cow position: | chr27:15033812-15033411 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 396 |
Conread position: | 199-567 |
Cow position: | chr27:9263185-9262792 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 267 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 40, 22 |
Conread position: | 201-515 |
Cow position: | chr27:15697443-15697777 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 130 |
Conread position: | 206-452 |
Cow position: | chr27:16627457-16627722 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 181 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 253-540 |
Cow position: | chr27:22647477-22647173 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 253-554 |
Cow position: | chr27:9970326-9970644 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 253-555 |
Cow position: | chr27:9332833-9333141 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 44 |
Conread position: | 253-562 |
Cow position: | chr27:2681678-2682000 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 72 |
Conread position: | 253-562 |
Cow position: | chr27:10383603-10383911 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 22 |
Conread position: | 253-562 |
Cow position: | chr27:13901279-13901604 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 320 |
Conread position: | 253-572 |
Cow position: | chr27:21350005-21350341 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 241 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 110, 25 |
Conread position: | 259-562 |
Cow position: | chr27:15867134-15866823 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 89 |
Conread position: | 260-571 |
Cow position: | chr27:30036031-30036360 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 327 |
Conread position: | 261-562 |
Cow position: | chr27:2331666-2331983 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 312 |
Conread position: | 261-563 |
Cow position: | chr27:24239951-24239649 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 210 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 185, 94 |
Conread position: | 270-547 |
Cow position: | chr27:16788124-16787832 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 37 |
Conread position: | 278-439 |
Cow position: | chr27:27469352-27469183 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 279-569 |
Cow position: | chr27:24054889-24055173 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 216 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 106, 57 |
Conread position: | 290-552 |
Cow position: | chr27:25112354-25112627 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 195 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 68, 229 |
Conread position: | 308-562 |
Cow position: | chr27:12239278-12239547 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 203 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 77, 178 |
Conread position: | 315-554 |
Cow position: | chr27:3649698-3649954 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 187 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 319-540 |
Cow position: | chr27:30677858-30677627 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 170 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 64, 33 |
Conread position: | 327-524 |
Cow position: | chr27:17476978-17476763 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 158 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 330-566 |
Cow position: | chr27:16332246-16331995 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 187 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 55, 235 |
Conread position: | 331-554 |
Cow position: | chr27:15099875-15100114 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 172 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 54, 180 |
Conread position: | 335-545 |
Cow position: | chr27:24205897-24205671 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 168 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 50, 220 |
Conread position: | 382-554 |
Cow position: | chr27:13422870-13422691 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 130 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 386-538 |
Cow position: | chr27:26599173-26599012 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 386-553 |
Cow position: | chr27:4834444-4834616 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 126 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 64, 10 |
Conread position: | 386-554 |
Cow position: | chr27:791748-791573 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 386-555 |
Cow position: | chr27:19300268-19300092 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 124 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 386-555 |
Cow position: | chr27:28984067-28984239 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 128 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 63, 98 |
Conread position: | 390-562 |
Cow position: | chr27:8262140-8262318 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 132 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 392-554 |
Cow position: | chr27:2936130-2936294 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 55, 105 |
Conread position: | 396-553 |
Cow position: | chr27:10324618-10324457 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 126 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 54, 81 |
Show alignments to all cow chromosomes.