Cow genome map

Conread name: rpigcb_7632.y1

Conread position: 7-554
Cow position:
Alignm length: 580
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 89

Conread position: 60-554
Cow position:
Alignm length: 517
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 12

Conread position: 60-588
Cow position:
Alignm length: 560
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 61-447
Cow position:
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 11

Conread position: 61-501
Cow position:
Alignm length: 471
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-510
Cow position:
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 16

Conread position: 61-522
Cow position:
Alignm length: 483
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 16

Conread position: 61-524
Cow position:
Alignm length: 493
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 11

Conread position: 61-554
Cow position:
Alignm length: 521
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 537
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 525
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position:
Alignm length: 514
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position:
Alignm length: 525
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-555
Cow position:
Alignm length: 529
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position:
Alignm length: 531
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-562
Cow position:
Alignm length: 533
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-562
Cow position:
Alignm length: 532
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position:
Alignm length: 532
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 15

Conread position: 61-562
Cow position:
Alignm length: 533
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position:
Alignm length: 533
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-562
Cow position:
Alignm length: 532
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-569
Cow position:
Alignm length: 533
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-569
Cow position:
Alignm length: 542
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-569
Cow position:
Alignm length: 539
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 15

Conread position: 62-555
Cow position:
Alignm length: 520
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-569
Cow position:
Alignm length: 538
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 63-571
Cow position:
Alignm length: 534
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 371

Conread position: 67-557
Cow position:
Alignm length: 507
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 69-553
Cow position:
Alignm length: 512
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 151

Conread position: 72-424
Cow position:
Alignm length: 376
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 72-562
Cow position:
Alignm length: 515
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 233

Conread position: 72-562
Cow position:
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 100

Conread position: 75-555
Cow position:
Alignm length: 521
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 41

Conread position: 84-562
Cow position:
Alignm length: 509
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 502

Conread position: 84-562
Cow position:
Alignm length: 511
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 49

Conread position: 86-571
Cow position:
Alignm length: 516
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 146

Conread position: 88-562
Cow position:
Alignm length: 505
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 498

Conread position: 90-566
Cow position:
Alignm length: 496
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 104

Conread position: 94-554
Cow position:
Alignm length: 487
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 98-540
Cow position:
Alignm length: 473
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 104-554
Cow position:
Alignm length: 480
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 106-444
Cow position:
Alignm length: 358
Alignm identity: 244
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 159, 62

Conread position: 121-532
Cow position:
Alignm length: 437
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 132

Conread position: 131-554
Cow position:
Alignm length: 454
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 140-562
Cow position:
Alignm length: 454
Alignm identity: 312
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 13, 58

Conread position: 148-554
Cow position:
Alignm length: 437
Alignm identity: 300
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 26, 69

Conread position: 152-557
Cow position:
Alignm length: 430
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 53

Conread position: 155-447
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 169

Conread position: 155-553
Cow position:
Alignm length: 409
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 110

Conread position: 163-562
Cow position:
Alignm length: 428
Alignm identity: 293
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 98, 29

Conread position: 179-562
Cow position:
Alignm length: 411
Alignm identity: 281
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 86, 144

Conread position: 187-562
Cow position:
Alignm length: 403
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 396

Conread position: 199-567
Cow position:
Alignm length: 397
Alignm identity: 267
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 40, 22

Conread position: 201-515
Cow position:
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 130

Conread position: 206-452
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 253-540
Cow position:
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-554
Cow position:
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-555
Cow position:
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 44

Conread position: 253-562
Cow position:
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 72

Conread position: 253-562
Cow position:
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 22

Conread position: 253-562
Cow position:
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 320

Conread position: 253-572
Cow position:
Alignm length: 339
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 110, 25

Conread position: 259-562
Cow position:
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 89

Conread position: 260-571
Cow position:
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 327

Conread position: 261-562
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 312

Conread position: 261-563
Cow position:
Alignm length: 309
Alignm identity: 210
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 185, 94

Conread position: 270-547
Cow position:
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 37

Conread position: 278-439
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 279-569
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 57

Conread position: 290-552
Cow position:
Alignm length: 279
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 229

Conread position: 308-562
Cow position:
Alignm length: 272
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 77, 178

Conread position: 315-554
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 319-540
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 33

Conread position: 327-524
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 330-566
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 55, 235

Conread position: 331-554
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 180

Conread position: 335-545
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 50, 220

Conread position: 382-554
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 386-538
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 386-553
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 10

Conread position: 386-554
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 386-555
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 386-555
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 98

Conread position: 390-562
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 392-554
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 105

Conread position: 396-553
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 81

Show alignments to all cow chromosomes.