Cow genome map
| Conread name: | rpigcb_7632.y1 |
| Conread position: | 38-552 |
| Cow position: | chr29:7665054-7664512 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 34 |
| Conread position: | 53-563 |
| Cow position: | chr29:32800237-32800769 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 55-529 |
| Cow position: | chr29:21254919-21255416 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 59-562 |
| Cow position: | chr29:43326479-43327012 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 59-563 |
| Cow position: | chr29:32515294-32515831 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 60-553 |
| Cow position: | chr29:34737727-34737213 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 187 |
| Conread position: | 60-569 |
| Cow position: | chr29:15943320-15943853 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 61-441 |
| Cow position: | chr29:408294-407904 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-452 |
| Cow position: | chr29:16347174-16347582 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 61-457 |
| Cow position: | chr29:1577006-1576608 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 61-494 |
| Cow position: | chr29:17408096-17408556 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 61-507 |
| Cow position: | chr29:16102149-16101675 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 61-518 |
| Cow position: | chr29:16036449-16035963 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-524 |
| Cow position: | chr29:19890523-19891025 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 11 |
| Conread position: | 61-524 |
| Cow position: | chr29:22745868-22746360 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-524 |
| Cow position: | chr29:35956334-35955850 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 61-540 |
| Cow position: | chr29:24806423-24806931 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-540 |
| Cow position: | chr29:32352586-32353071 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-553 |
| Cow position: | chr29:726697-727218 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 15 |
| Conread position: | 61-553 |
| Cow position: | chr29:10452847-10452327 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-553 |
| Cow position: | chr29:10820747-10820226 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-553 |
| Cow position: | chr29:22279342-22279861 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-553 |
| Cow position: | chr29:39076750-39076229 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-553 |
| Cow position: | chr29:43964585-43964071 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:607669-607158 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:1478420-1478941 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:3329561-3330082 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 5 |
| Conread position: | 61-554 |
| Cow position: | chr29:4163656-4164178 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:7847357-7847882 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:16064679-16065200 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:21226945-21227465 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:21429892-21429374 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:21474117-21474639 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:28657400-28656878 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:31765008-31765529 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:32291561-32292084 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:35264885-35265407 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:40618870-40618365 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:42256010-42255488 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-554 |
| Cow position: | chr29:42806959-42807474 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-555 |
| Cow position: | chr29:6263040-6262518 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-555 |
| Cow position: | chr29:14208588-14208077 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 11 |
| Conread position: | 61-555 |
| Cow position: | chr29:19620300-19619778 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 61-555 |
| Cow position: | chr29:20254135-20254655 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-555 |
| Cow position: | chr29:45462201-45462722 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-558 |
| Cow position: | chr29:9079830-9079301 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:2102815-2103339 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:2838368-2837839 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:5240362-5240892 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:6934459-6934980 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:7812229-7811699 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:10644443-10643918 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:19515376-19514842 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:19656868-19657378 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:26161869-26161338 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:28697410-28696882 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:32289359-32289882 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:32543105-32543634 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-562 |
| Cow position: | chr29:32807349-32807857 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 61-563 |
| Cow position: | chr29:45492-44966 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-563 |
| Cow position: | chr29:23979679-23980209 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-563 |
| Cow position: | chr29:31184344-31184879 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-563 |
| Cow position: | chr29:32556776-32556241 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-566 |
| Cow position: | chr29:4200358-4200891 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 12 |
| Conread position: | 61-566 |
| Cow position: | chr29:25929541-25929007 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 61-569 |
| Cow position: | chr29:17153216-17153741 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 61-572 |
| Cow position: | chr29:8624228-8623700 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 62-585 |
| Cow position: | chr29:3585242-3584699 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 117 |
| Conread position: | 63-554 |
| Cow position: | chr29:35002689-35002184 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 63-555 |
| Cow position: | chr29:24577622-24578143 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 66-553 |
| Cow position: | chr29:12797556-12798072 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 72-554 |
| Cow position: | chr29:45651573-45651055 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 287 |
| Conread position: | 72-557 |
| Cow position: | chr29:40156722-40157237 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 72-562 |
| Cow position: | chr29:32962292-32962804 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 73-554 |
| Cow position: | chr29:27702056-27702567 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 73-562 |
| Cow position: | chr29:35274060-35273542 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 513 |
| Conread position: | 79-508 |
| Cow position: | chr29:8892268-8891816 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 293 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 63, 418 |
| Conread position: | 79-522 |
| Cow position: | chr29:13027207-13027675 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 254 |
| Conread position: | 83-553 |
| Cow position: | chr29:32732089-32732588 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 402 |
| Conread position: | 83-562 |
| Cow position: | chr29:11785993-11786502 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 86-428 |
| Cow position: | chr29:38746039-38746405 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 89-554 |
| Cow position: | chr29:6218811-6218321 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 233 |
| Conread position: | 95-457 |
| Cow position: | chr29:8666665-8667020 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 105-554 |
| Cow position: | chr29:13624363-13623884 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 107-436 |
| Cow position: | chr29:44021076-44020738 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 120-552 |
| Cow position: | chr29:27857598-27858040 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 213 |
| Conread position: | 121-554 |
| Cow position: | chr29:40294334-40294797 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 121-556 |
| Cow position: | chr29:36634323-36633867 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 121-562 |
| Cow position: | chr29:36208724-36209193 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 139-554 |
| Cow position: | chr29:15072436-15071991 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 148-553 |
| Cow position: | chr29:13099227-13099661 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 148-555 |
| Cow position: | chr29:38350298-38349871 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 198 |
| Conread position: | 148-562 |
| Cow position: | chr29:7428085-7427645 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 435 |
| Conread position: | 148-563 |
| Cow position: | chr29:40498818-40498377 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 155-562 |
| Cow position: | chr29:2307066-2307498 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 211 |
| Conread position: | 155-563 |
| Cow position: | chr29:38409257-38409700 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 157-457 |
| Cow position: | chr29:253951-254259 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 157-546 |
| Cow position: | chr29:6872208-6871801 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 160 |
| Conread position: | 162-540 |
| Cow position: | chr29:40954824-40954418 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 162-554 |
| Cow position: | chr29:649123-649523 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 184 |
| Conread position: | 162-554 |
| Cow position: | chr29:13849875-13849460 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 166-516 |
| Cow position: | chr29:35739613-35739249 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 170-554 |
| Cow position: | chr29:18010654-18011065 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 171-554 |
| Cow position: | chr29:2299222-2298829 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 86 |
| Conread position: | 179-563 |
| Cow position: | chr29:38229095-38229506 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 188-562 |
| Cow position: | chr29:43691860-43692237 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 13 |
| Conread position: | 188-588 |
| Cow position: | chr29:20999334-20999732 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 168, 34 |
| Conread position: | 199-562 |
| Cow position: | chr29:9639422-9639032 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 385 |
| Conread position: | 200-588 |
| Cow position: | chr29:5978209-5977803 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 124 |
| Conread position: | 201-563 |
| Cow position: | chr29:16185669-16185276 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 206-502 |
| Cow position: | chr29:4366281-4366596 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 97 |
| Conread position: | 208-562 |
| Cow position: | chr29:5961122-5961500 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 221-554 |
| Cow position: | chr29:2401818-2402176 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 223 |
| Conread position: | 224-563 |
| Cow position: | chr29:26290166-26289813 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 246-523 |
| Cow position: | chr29:24951634-24951928 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 253-540 |
| Cow position: | chr29:26262794-26263098 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 271 |
| Conread position: | 253-540 |
| Cow position: | chr29:32316242-32316545 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 85 |
| Conread position: | 253-552 |
| Cow position: | chr29:40116476-40116799 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 284 |
| Conread position: | 253-554 |
| Cow position: | chr29:11119540-11119222 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 253-554 |
| Cow position: | chr29:34850929-34851244 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 253-569 |
| Cow position: | chr29:27259713-27259374 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 261-554 |
| Cow position: | chr29:13128589-13128887 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 122 |
| Conread position: | 261-554 |
| Cow position: | chr29:16096992-16097302 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 263-554 |
| Cow position: | chr29:21167455-21167757 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 71 |
| Conread position: | 265-480 |
| Cow position: | chr29:2184599-2184812 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 131, 47 |
| Conread position: | 270-563 |
| Cow position: | chr29:960389-960704 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 277-447 |
| Cow position: | chr29:5787296-5787116 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 277-554 |
| Cow position: | chr29:5785690-5785984 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 279-555 |
| Cow position: | chr29:10032456-10032163 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 281-554 |
| Cow position: | chr29:42940181-42940468 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 97, 32 |
| Conread position: | 292-562 |
| Cow position: | chr29:7289760-7290042 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 79, 139 |
| Conread position: | 292-570 |
| Cow position: | chr29:3106516-3106799 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 295-554 |
| Cow position: | chr29:18879684-18879419 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 143, 13 |
| Conread position: | 295-569 |
| Cow position: | chr29:108598-108886 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 83, 138 |
| Conread position: | 297-562 |
| Cow position: | chr29:35076339-35076621 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 277 |
| Conread position: | 309-546 |
| Cow position: | chr29:43517753-43517499 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 235 |
| Conread position: | 310-540 |
| Cow position: | chr29:35736051-35736298 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 312-525 |
| Cow position: | chr29:21446107-21445877 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 327-553 |
| Cow position: | chr29:10297616-10297375 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 328-554 |
| Cow position: | chr29:19761307-19761548 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 336-554 |
| Cow position: | chr29:4518999-4519223 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 342-562 |
| Cow position: | chr29:14116078-14116311 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 344-554 |
| Cow position: | chr29:13923341-13923569 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 351-562 |
| Cow position: | chr29:8589466-8589244 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 353-554 |
| Cow position: | chr29:27814064-27814277 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 32, 134 |
| Conread position: | 373-540 |
| Cow position: | chr29:10170934-10170758 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 378-554 |
| Cow position: | chr29:2694007-2694191 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 378-562 |
| Cow position: | chr29:40095838-40096028 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 72, 177 |
| Conread position: | 384-562 |
| Cow position: | chr29:17794316-17794503 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 384-563 |
| Cow position: | chr29:29566028-29565838 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 385-566 |
| Cow position: | chr29:1605423-1605236 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 65, 181 |
| Conread position: | 386-520 |
| Cow position: | chr29:7604718-7604858 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 386-553 |
| Cow position: | chr29:32941960-32942136 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 386-554 |
| Cow position: | chr29:2461471-2461646 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 386-554 |
| Cow position: | chr29:15699142-15698967 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 386-554 |
| Cow position: | chr29:16041976-16042151 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 386-554 |
| Cow position: | chr29:31094247-31094072 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 386-554 |
| Cow position: | chr29:32329945-32329770 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 386-586 |
| Cow position: | chr29:11136792-11136581 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 386-586 |
| Cow position: | chr29:12852659-12852872 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 386-588 |
| Cow position: | chr29:35280803-35280596 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 38, 162 |
| Conread position: | 387-569 |
| Cow position: | chr29:18365307-18365117 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 388-554 |
| Cow position: | chr29:14568617-14568786 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 61, 122 |
| Conread position: | 388-563 |
| Cow position: | chr29:4481072-4480891 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 397-572 |
| Cow position: | chr29:31785813-31785984 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 137, 46 |
| Conread position: | 399-555 |
| Cow position: | chr29:529189-529026 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.