Cow genome map
| Conread name: | rpigcb_7632.y1 | 
| Conread position: | 2-263 | 
| Cow position: | chr4:16832933-16833196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 187 | 
| Conread position: | 2-552 | 
| Cow position: | chr4:1500448-1499884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 126 | 
| Conread position: | 52-554 | 
| Cow position: | chr4:25878102-25878628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 128 | 
| Conread position: | 55-537 | 
| Cow position: | chr4:2350030-2349527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 17 | 
| Conread position: | 56-554 | 
| Cow position: | chr4:54811180-54810638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 16 | 
| Conread position: | 57-555 | 
| Cow position: | chr4:55669931-55670449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 257 | 
| Conread position: | 59-563 | 
| Cow position: | chr4:5873786-5874299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 528 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 13 | 
| Conread position: | 60-436 | 
| Cow position: | chr4:20606315-20606718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 19 | 
| Conread position: | 60-562 | 
| Cow position: | chr4:10135515-10134989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 12 | 
| Conread position: | 60-562 | 
| Cow position: | chr4:48029544-48030074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 533 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 12 | 
| Conread position: | 60-566 | 
| Cow position: | chr4:2264025-2263487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 12 | 
| Conread position: | 60-566 | 
| Cow position: | chr4:28174176-28173651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 12 | 
| Conread position: | 61-424 | 
| Cow position: | chr4:47055739-47055354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-427 | 
| Cow position: | chr4:27891760-27892148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-438 | 
| Cow position: | chr4:6547722-6548120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-447 | 
| Cow position: | chr4:27518685-27518277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-452 | 
| Cow position: | chr4:58882696-58882286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 11 | 
| Conread position: | 61-457 | 
| Cow position: | chr4:50977238-50977635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 226, 11 | 
| Conread position: | 61-477 | 
| Cow position: | chr4:1047567-1047132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 202, 11 | 
| Conread position: | 61-485 | 
| Cow position: | chr4:28835249-28835698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 11 | 
| Conread position: | 61-489 | 
| Cow position: | chr4:12238540-12238090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 11 | 
| Conread position: | 61-491 | 
| Cow position: | chr4:60651280-60651739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 11 | 
| Conread position: | 61-500 | 
| Cow position: | chr4:31485295-31484827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-516 | 
| Cow position: | chr4:38909197-38909671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-522 | 
| Cow position: | chr4:35929176-35929660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 204, 11 | 
| Conread position: | 61-524 | 
| Cow position: | chr4:3284670-3284179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-524 | 
| Cow position: | chr4:33831743-33831251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-524 | 
| Cow position: | chr4:58291428-58291918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-532 | 
| Cow position: | chr4:65890480-65890968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 11 | 
| Conread position: | 61-538 | 
| Cow position: | chr4:41957449-41957954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-540 | 
| Cow position: | chr4:27177515-27178022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-540 | 
| Cow position: | chr4:41961584-41962091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-553 | 
| Cow position: | chr4:23525274-23525792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 523 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 204, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:606298-606814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:1927948-1927427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:6266526-6266007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:7779087-7779609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:8677489-8678010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:9040633-9041155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:9356925-9357447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:10424179-10424701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:15873949-15873430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 521 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:17033814-17033292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:17821217-17821739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:18004402-18004923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:18336270-18335742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:20657373-20656856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:21298094-21297571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:21341760-21342282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:26886236-26885714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:27336900-27337420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:33020945-33020423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:35144858-35144336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:35867910-35868396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 514 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:38583568-38584086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:40697780-40697258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:41473143-41472621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:44778506-44777983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:47263463-47263986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:48732364-48732885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:62907334-62906813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:65430968-65431479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-554 | 
| Cow position: | chr4:67393914-67394435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-555 | 
| Cow position: | chr4:3474373-3474880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-555 | 
| Cow position: | chr4:5611312-5610801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 522 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 11 | 
| Conread position: | 61-555 | 
| Cow position: | chr4:29530770-29530248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-555 | 
| Cow position: | chr4:43316962-43316439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-557 | 
| Cow position: | chr4:3169968-3170492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 526 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:3252857-3252335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:6487680-6487152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:16362888-16363416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:17876653-17877174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 526 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:20242843-20243372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:23304654-23304125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:25596798-25596270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:31562542-31562017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 533 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:33070154-33069624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:44733313-44733835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:57987431-57987959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:61241970-61242495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-562 | 
| Cow position: | chr4:67382974-67383493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 522 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-563 | 
| Cow position: | chr4:4379078-4379590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 533 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-563 | 
| Cow position: | chr4:54758550-54758037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 523 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-565 | 
| Cow position: | chr4:3069609-3070130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 11 | 
| Conread position: | 61-565 | 
| Cow position: | chr4:34700861-34700338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 11 | 
| Conread position: | 61-566 | 
| Cow position: | chr4:10045080-10044549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-566 | 
| Cow position: | chr4:12606177-12605661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 11 | 
| Conread position: | 61-566 | 
| Cow position: | chr4:17834160-17833627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 11 | 
| Conread position: | 61-566 | 
| Cow position: | chr4:37785989-37786519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 9 | 
| Conread position: | 61-566 | 
| Cow position: | chr4:43883781-43884313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-566 | 
| Cow position: | chr4:46711909-46711384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 535 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 202, 11 | 
| Conread position: | 61-567 | 
| Cow position: | chr4:64875336-64874806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-569 | 
| Cow position: | chr4:4418733-4419273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 11 | 
| Conread position: | 61-569 | 
| Cow position: | chr4:23452326-23451799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 11 | 
| Conread position: | 61-569 | 
| Cow position: | chr4:36899064-36899603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 11 | 
| Conread position: | 61-577 | 
| Cow position: | chr4:11100907-11100366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 11 | 
| Conread position: | 62-518 | 
| Cow position: | chr4:6000755-6000261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 10 | 
| Conread position: | 62-540 | 
| Cow position: | chr4:40217526-40218033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 10 | 
| Conread position: | 62-554 | 
| Cow position: | chr4:17234709-17235228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 523 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 10 | 
| Conread position: | 62-554 | 
| Cow position: | chr4:65581203-65581728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 11 | 
| Conread position: | 62-556 | 
| Cow position: | chr4:19236758-19237278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 10 | 
| Conread position: | 62-560 | 
| Cow position: | chr4:25971651-25972149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 137 | 
| Conread position: | 62-562 | 
| Cow position: | chr4:34712505-34713032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 11 | 
| Conread position: | 63-483 | 
| Cow position: | chr4:22904394-22904819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 53, 38 | 
| Conread position: | 63-524 | 
| Cow position: | chr4:10823180-10822694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 7 | 
| Conread position: | 63-555 | 
| Cow position: | chr4:3449483-3450012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 63-562 | 
| Cow position: | chr4:27539358-27539880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 9 | 
| Conread position: | 64-553 | 
| Cow position: | chr4:12840632-12841152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 13 | 
| Conread position: | 72-447 | 
| Cow position: | chr4:32214851-32215248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 72-452 | 
| Cow position: | chr4:18096915-18096512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 277 | 
| Conread position: | 72-522 | 
| Cow position: | chr4:4184872-4185353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 72-523 | 
| Cow position: | chr4:34176296-34175804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 72-525 | 
| Cow position: | chr4:10541533-10541064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 82, 14 | 
| Conread position: | 72-532 | 
| Cow position: | chr4:64038948-64039394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 293, 64 | 
| Conread position: | 72-535 | 
| Cow position: | chr4:33388-32910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 80 | 
| Conread position: | 72-555 | 
| Cow position: | chr4:27288403-27287897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 191, 27 | 
| Conread position: | 72-562 | 
| Cow position: | chr4:358582-359098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 523 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 264 | 
| Conread position: | 72-562 | 
| Cow position: | chr4:11108379-11107869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 44 | 
| Conread position: | 72-562 | 
| Cow position: | chr4:30507901-30508415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 294 | 
| Conread position: | 72-562 | 
| Cow position: | chr4:66174621-66174105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 521 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 104 | 
| Conread position: | 72-569 | 
| Cow position: | chr4:20630140-20630640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 279 | 
| Conread position: | 73-522 | 
| Cow position: | chr4:6863533-6863057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 433 | 
| Conread position: | 74-556 | 
| Cow position: | chr4:8648772-8649287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 517 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 10 | 
| Conread position: | 75-498 | 
| Cow position: | chr4:54931906-54931460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 274 | 
| Conread position: | 75-522 | 
| Cow position: | chr4:25982984-25983462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 55 | 
| Conread position: | 75-554 | 
| Cow position: | chr4:22074372-22073890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 26 | 
| Conread position: | 78-554 | 
| Cow position: | chr4:60855463-60855969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 507 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 78-556 | 
| Cow position: | chr4:45654469-45653963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 266 | 
| Conread position: | 80-554 | 
| Cow position: | chr4:38153597-38153091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 105 | 
| Conread position: | 81-485 | 
| Cow position: | chr4:13254378-13254804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 73, 107 | 
| Conread position: | 83-444 | 
| Cow position: | chr4:19206405-19206788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 84, 22 | 
| Conread position: | 89-553 | 
| Cow position: | chr4:39645463-39645963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 32 | 
| Conread position: | 90-541 | 
| Cow position: | chr4:15463710-15463236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 15 | 
| Conread position: | 94-555 | 
| Cow position: | chr4:3355217-3354732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 12 | 
| Conread position: | 96-554 | 
| Cow position: | chr4:59783395-59783873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 112 | 
| Conread position: | 97-523 | 
| Cow position: | chr4:30540945-30540489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 97-554 | 
| Cow position: | chr4:65199079-65198592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 97-562 | 
| Cow position: | chr4:29034351-29034819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 76 | 
| Conread position: | 98-554 | 
| Cow position: | chr4:10122133-10122615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 165 | 
| Conread position: | 99-554 | 
| Cow position: | chr4:18330810-18331295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 110-417 | 
| Cow position: | chr4:19108319-19107987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 111-555 | 
| Cow position: | chr4:48496413-48496887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 112-554 | 
| Cow position: | chr4:52085894-52086366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 259 | 
| Conread position: | 113-553 | 
| Cow position: | chr4:36811759-36812222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 417 | 
| Conread position: | 115-557 | 
| Cow position: | chr4:11192694-11193170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 116-562 | 
| Cow position: | chr4:24139613-24140091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 458 | 
| Conread position: | 127-559 | 
| Cow position: | chr4:44593639-44593189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 67 | 
| Conread position: | 130-554 | 
| Cow position: | chr4:33629277-33628823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 131-562 | 
| Cow position: | chr4:6035271-6034811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 455 | 
| Conread position: | 134-554 | 
| Cow position: | chr4:2227005-2226555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 294 | 
| Conread position: | 135-552 | 
| Cow position: | chr4:10614416-10613985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 22 | 
| Conread position: | 142-554 | 
| Cow position: | chr4:15617461-15617903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 148-500 | 
| Cow position: | chr4:41131371-41130992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 0 | 
| Conread position: | 148-554 | 
| Cow position: | chr4:36754561-36754993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 353 | 
| Conread position: | 148-562 | 
| Cow position: | chr4:3962112-3961680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 131, 149 | 
| Conread position: | 154-572 | 
| Cow position: | chr4:1369275-1368841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 162 | 
| Conread position: | 155-554 | 
| Cow position: | chr4:47949556-47949130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 158-554 | 
| Cow position: | chr4:62454201-62453779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 199 | 
| Conread position: | 162-554 | 
| Cow position: | chr4:15055599-15056012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 0 | 
| Conread position: | 168-504 | 
| Cow position: | chr4:31588233-31587870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 170-554 | 
| Cow position: | chr4:62962561-62962152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 397 | 
| Conread position: | 171-553 | 
| Cow position: | chr4:14817924-14817527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 50, 177 | 
| Conread position: | 172-445 | 
| Cow position: | chr4:41601976-41601687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 89, 113 | 
| Conread position: | 178-554 | 
| Cow position: | chr4:47115641-47116045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 180-562 | 
| Cow position: | chr4:26875099-26874692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 402 | 
| Conread position: | 182-554 | 
| Cow position: | chr4:6806117-6806516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 185-554 | 
| Cow position: | chr4:17752122-17751733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 340 | 
| Conread position: | 185-554 | 
| Cow position: | chr4:20616905-20616509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 185-562 | 
| Cow position: | chr4:54972863-54973265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 382 | 
| Conread position: | 191-562 | 
| Cow position: | chr4:16606329-16605959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 187, 74 | 
| Conread position: | 193-554 | 
| Cow position: | chr4:22025269-22024881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 58, 100 | 
| Conread position: | 198-524 | 
| Cow position: | chr4:8560175-8559826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 200-562 | 
| Cow position: | chr4:55510038-55509638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 9 | 
| Conread position: | 202-562 | 
| Cow position: | chr4:58859772-58859391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 63, 329 | 
| Conread position: | 205-554 | 
| Cow position: | chr4:20090944-20091309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 92 | 
| Conread position: | 216-524 | 
| Cow position: | chr4:9796507-9796174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 216-553 | 
| Cow position: | chr4:68795566-68795913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 9, 15 | 
| Conread position: | 218-554 | 
| Cow position: | chr4:33171002-33171365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 220-518 | 
| Cow position: | chr4:12751215-12751537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 14, 40 | 
| Conread position: | 223-435 | 
| Cow position: | chr4:25354151-25353923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 42, 88 | 
| Conread position: | 225-554 | 
| Cow position: | chr4:21363943-21364277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 144, 75 | 
| Conread position: | 228-563 | 
| Cow position: | chr4:49744537-49744888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 157, 345 | 
| Conread position: | 232-563 | 
| Cow position: | chr4:41096839-41097189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 235-563 | 
| Cow position: | chr4:5441789-5441439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 237-562 | 
| Cow position: | chr4:2139936-2140276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 16, 29 | 
| Conread position: | 238-486 | 
| Cow position: | chr4:13328558-13328820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 8, 88 | 
| Conread position: | 253-489 | 
| Cow position: | chr4:10553139-10553386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 132, 31 | 
| Conread position: | 253-510 | 
| Cow position: | chr4:50019602-50019336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 132, 204 | 
| Conread position: | 253-520 | 
| Cow position: | chr4:8768934-8769214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 102 | 
| Conread position: | 253-532 | 
| Cow position: | chr4:23437589-23437296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 8.99999e-40 | 
| Alignm gaps (pig, cow): | 132, 43 | 
| Conread position: | 253-551 | 
| Cow position: | chr4:48375692-48376007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 253-554 | 
| Cow position: | chr4:161973-162289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 253-554 | 
| Cow position: | chr4:4850232-4850550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 253-554 | 
| Cow position: | chr4:10403824-10403506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 253-554 | 
| Cow position: | chr4:19049152-19049470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 190 | 
| Conread position: | 253-554 | 
| Cow position: | chr4:36073912-36074229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 123 | 
| Conread position: | 253-554 | 
| Cow position: | chr4:38564803-38564485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 253-562 | 
| Cow position: | chr4:15814403-15814085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 241 | 
| Conread position: | 253-562 | 
| Cow position: | chr4:16641709-16642034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 320 | 
| Conread position: | 253-562 | 
| Cow position: | chr4:19956916-19957243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 307 | 
| Conread position: | 253-563 | 
| Cow position: | chr4:65816766-65816442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 124, 35 | 
| Conread position: | 253-566 | 
| Cow position: | chr4:17068217-17067893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 81 | 
| Conread position: | 253-570 | 
| Cow position: | chr4:7049172-7048843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 254-562 | 
| Cow position: | chr4:61449405-61449728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 131, 311 | 
| Conread position: | 256-558 | 
| Cow position: | chr4:11217657-11217969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 62 | 
| Conread position: | 257-553 | 
| Cow position: | chr4:45499076-45499379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 13, 67 | 
| Conread position: | 261-457 | 
| Cow position: | chr4:61625664-61625461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 117, 50 | 
| Conread position: | 261-552 | 
| Cow position: | chr4:33181389-33181079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 261-554 | 
| Cow position: | chr4:60580231-60579921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 261-554 | 
| Cow position: | chr4:67767318-67767628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 261-562 | 
| Cow position: | chr4:25225885-25226189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 50 | 
| Conread position: | 261-562 | 
| Cow position: | chr4:54696132-54695816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 314 | 
| Conread position: | 263-552 | 
| Cow position: | chr4:34167133-34166838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 242 | 
| Conread position: | 265-554 | 
| Cow position: | chr4:651933-652236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 9 | 
| Conread position: | 265-554 | 
| Cow position: | chr4:15802936-15802630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 269-554 | 
| Cow position: | chr4:533197-533499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 271-553 | 
| Cow position: | chr4:46667570-46667866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 7, 51 | 
| Conread position: | 275-517 | 
| Cow position: | chr4:61724154-61724410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 88 | 
| Conread position: | 279-496 | 
| Cow position: | chr4:5578905-5578671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 106, 0 | 
| Conread position: | 279-502 | 
| Cow position: | chr4:8935802-8936052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 279-540 | 
| Cow position: | chr4:8703720-8703983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 77 | 
| Conread position: | 279-554 | 
| Cow position: | chr4:54162147-54161854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 279-562 | 
| Cow position: | chr4:19140919-19141220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 284-562 | 
| Cow position: | chr4:2601134-2601420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 96, 30 | 
| Conread position: | 286-501 | 
| Cow position: | chr4:61191912-61192137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 289-562 | 
| Cow position: | chr4:39457587-39457885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 96, 286 | 
| Conread position: | 290-577 | 
| Cow position: | chr4:22723872-22724169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 95, 31 | 
| Conread position: | 292-554 | 
| Cow position: | chr4:11026285-11026012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 165 | 
| Conread position: | 292-555 | 
| Cow position: | chr4:2191365-2191084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 296-508 | 
| Cow position: | chr4:25192943-25192721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 301-555 | 
| Cow position: | chr4:11200807-11201077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 84, 219 | 
| Conread position: | 309-540 | 
| Cow position: | chr4:61651608-61651361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 76, 12 | 
| Conread position: | 309-554 | 
| Cow position: | chr4:63195632-63195371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 313-562 | 
| Cow position: | chr4:11919000-11918734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 314-564 | 
| Cow position: | chr4:55520307-55520572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 71, 15 | 
| Conread position: | 327-554 | 
| Cow position: | chr4:3128821-3129064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 332-454 | 
| Cow position: | chr4:19006060-19006181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 333-554 | 
| Cow position: | chr4:6445732-6445969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 47, 180 | 
| Conread position: | 378-540 | 
| Cow position: | chr4:30474404-30474574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 383-569 | 
| Cow position: | chr4:43898854-43898662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 66, 180 | 
| Conread position: | 384-556 | 
| Cow position: | chr4:12033376-12033555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 54, 32 | 
| Conread position: | 385-554 | 
| Cow position: | chr4:14642367-14642543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 385-554 | 
| Cow position: | chr4:14684244-14684420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 386-524 | 
| Cow position: | chr4:68386558-68386702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 386-533 | 
| Cow position: | chr4:31135810-31135962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 386-540 | 
| Cow position: | chr4:22102320-22102159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 386-552 | 
| Cow position: | chr4:46526108-46526280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 63, 95 | 
| Conread position: | 386-554 | 
| Cow position: | chr4:5882509-5882684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 386-554 | 
| Cow position: | chr4:8700173-8700347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 57, 124 | 
| Conread position: | 386-554 | 
| Cow position: | chr4:14163820-14163995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 386-554 | 
| Cow position: | chr4:21045127-21044952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 386-554 | 
| Cow position: | chr4:24179444-24179269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 386-554 | 
| Cow position: | chr4:28612925-28613090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 64, 42 | 
| Conread position: | 386-554 | 
| Cow position: | chr4:61817370-61817195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 386-554 | 
| Cow position: | chr4:64155762-64155937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 386-555 | 
| Cow position: | chr4:39421629-39421805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 386-557 | 
| Cow position: | chr4:22014386-22014210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 386-557 | 
| Cow position: | chr4:54170456-54170637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 386-562 | 
| Cow position: | chr4:6458014-6457835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 63, 95 | 
| Conread position: | 386-562 | 
| Cow position: | chr4:22743423-22743600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 62, 141 | 
| Conread position: | 386-562 | 
| Cow position: | chr4:47774558-47774376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 386-562 | 
| Cow position: | chr4:54502256-54502076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 63, 143 | 
| Conread position: | 386-562 | 
| Cow position: | chr4:59452484-59452302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 63, 177 | 
| Conread position: | 386-565 | 
| Cow position: | chr4:33399439-33399252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 387-562 | 
| Cow position: | chr4:27462433-27462606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 388-545 | 
| Cow position: | chr4:48153274-48153110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 388-572 | 
| Cow position: | chr4:61400316-61400123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 389-542 | 
| Cow position: | chr4:670614-670454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 391-562 | 
| Cow position: | chr4:61065715-61065889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 392-562 | 
| Cow position: | chr4:23508239-23508416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 58, 165 | 
| Conread position: | 393-531 | 
| Cow position: | chr4:56369787-56369934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 396-566 | 
| Cow position: | chr4:11872805-11872631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 54, 165 | 
| Conread position: | 406-567 | 
| Cow position: | chr4:8760334-8760502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 410-562 | 
| Cow position: | chr4:53544522-53544677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 37, 125 | 
| Conread position: | 440-569 | 
| Cow position: | chr4:18107935-18108066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 9, 0 | 
Show alignments to all cow chromosomes.
