Cow genome map

Conread name: rpigcb_7632.y1

Conread position: 16-554
Cow position: chr6:17386401-17386971 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 16-562
Cow position: chr6:17112287-17111711 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 440

Conread position: 20-538
Cow position: chr6:33508149-33508678 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 53

Conread position: 47-470
Cow position: chr6:25357947-25357503 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 25

Conread position: 50-524
Cow position: chr6:2089199-2089693 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 12

Conread position: 50-570
Cow position: chr6:34030202-34030718 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 22

Conread position: 51-562
Cow position: chr6:9734045-9733533 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 26

Conread position: 56-554
Cow position: chr6:53543562-53543035 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 56-566
Cow position: chr6:1096813-1096274 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 357
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 143, 16

Conread position: 57-525
Cow position: chr6:59618995-59619496 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 60-520
Cow position: chr6:6595348-6595832 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 13

Conread position: 60-561
Cow position: chr6:3573721-3574241 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 12

Conread position: 60-562
Cow position: chr6:55592980-55593525 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 61-416
Cow position: chr6:20351163-20350786 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-419
Cow position: chr6:41408331-41408710 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-427
Cow position: chr6:2452774-2453160 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 61-430
Cow position: chr6:12628828-12629202 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 11

Conread position: 61-447
Cow position: chr6:33490128-33489720 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-452
Cow position: chr6:52899876-52900285 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 92, 16

Conread position: 61-464
Cow position: chr6:1507584-1507159 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-464
Cow position: chr6:27151515-27151090 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-464
Cow position: chr6:66188874-66188449 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-464
Cow position: chr6:68030105-68030530 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-477
Cow position: chr6:11168432-11168876 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-495
Cow position: chr6:30269977-30269513 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-495
Cow position: chr6:51867921-51868376 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-503
Cow position: chr6:53935706-53935241 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-505
Cow position: chr6:27475338-27475803 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-508
Cow position: chr6:58605457-58605929 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 11

Conread position: 61-524
Cow position: chr6:36230600-36230108 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-524
Cow position: chr6:43620657-43621149 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-524
Cow position: chr6:67173481-67173974 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-534
Cow position: chr6:34843787-34843285 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 61-540
Cow position: chr6:7467724-7467217 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chr6:15138240-15137739 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 11

Conread position: 61-540
Cow position: chr6:19713308-19712811 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chr6:26668097-26667591 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chr6:61829155-61829663 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-552
Cow position: chr6:10267166-10266681 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 11

Conread position: 61-552
Cow position: chr6:15276313-15275794 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-553
Cow position: chr6:16418760-16418236 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 11

Conread position: 61-553
Cow position: chr6:44017902-44017381 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-553
Cow position: chr6:51717482-51718004 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:127206-126687 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:888483-889005 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:1402603-1402115 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-554
Cow position: chr6:1407191-1406703 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-554
Cow position: chr6:2876105-2875586 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:3152144-3152663 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 11

Conread position: 61-554
Cow position: chr6:6556887-6557409 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:7138414-7137894 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:9234438-9234958 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:10044141-10044654 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:11019583-11020106 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:11870008-11869488 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:13308459-13307950 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 11

Conread position: 61-554
Cow position: chr6:16050364-16049845 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 11

Conread position: 61-554
Cow position: chr6:19103982-19103460 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:22044082-22043561 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:22737781-22737258 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:25375168-25374660 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 11

Conread position: 61-554
Cow position: chr6:26325273-26324752 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:28001450-28000948 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 11

Conread position: 61-554
Cow position: chr6:28064917-28065438 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position: chr6:28185404-28184872 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:31913249-31912727 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:31940793-31941315 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:37387504-37388014 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:39912251-39912770 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:44147021-44146501 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:45480150-45479640 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 11

Conread position: 61-554
Cow position: chr6:45937224-45937727 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:45975435-45975947 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 11

Conread position: 61-554
Cow position: chr6:50121000-50120483 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:55238622-55239138 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:56452169-56451647 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:57521100-57521623 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 11

Conread position: 61-554
Cow position: chr6:60379089-60379611 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:62664701-62665223 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 15

Conread position: 61-554
Cow position: chr6:65819654-65819134 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chr6:67553159-67553680 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-555
Cow position: chr6:5946850-5946326 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 12

Conread position: 61-555
Cow position: chr6:6182782-6182277 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-555
Cow position: chr6:20450886-20451408 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr6:28160335-28160857 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chr6:40864106-40863583 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-557
Cow position: chr6:9738327-9737806 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-562
Cow position: chr6:705932-706453 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr6:3272554-3272027 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-562
Cow position: chr6:3886580-3886050 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-562
Cow position: chr6:11289530-11289012 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 11

Conread position: 61-562
Cow position: chr6:11722270-11721753 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 11

Conread position: 61-562
Cow position: chr6:16592891-16593403 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr6:21832733-21832205 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr6:24242217-24242742 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr6:25790773-25790262 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-562
Cow position: chr6:28102939-28102418 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 5

Conread position: 61-562
Cow position: chr6:32419874-32420404 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 432

Conread position: 61-562
Cow position: chr6:36531207-36531729 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr6:39331605-39331078 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr6:39999531-39999004 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 11

Conread position: 61-562
Cow position: chr6:47040283-47039756 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-562
Cow position: chr6:50571114-50571646 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 61-562
Cow position: chr6:51733008-51733536 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-562
Cow position: chr6:60332269-60332800 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chr6:60876225-60876751 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 521

Conread position: 61-562
Cow position: chr6:64719244-64719771 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-563
Cow position: chr6:478476-479007 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-563
Cow position: chr6:41231413-41231944 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 61-563
Cow position: chr6:46947745-46948276 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-565
Cow position: chr6:27527033-27526507 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 11

Conread position: 61-567
Cow position: chr6:55539344-55538811 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-569
Cow position: chr6:15784047-15783527 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-569
Cow position: chr6:16766914-16766378 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 62-552
Cow position: chr6:8634373-8633878 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 15

Conread position: 62-554
Cow position: chr6:43797985-43797452 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 10

Conread position: 62-554
Cow position: chr6:51149869-51150390 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 10

Conread position: 62-563
Cow position: chr6:42266666-42267178 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-566
Cow position: chr6:40550773-40550241 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 523

Conread position: 63-524
Cow position: chr6:328432-327945 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-531
Cow position: chr6:30317017-30316520 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 63-562
Cow position: chr6:17049297-17049828 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 526

Conread position: 63-562
Cow position: chr6:35873788-35873277 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 125

Conread position: 63-562
Cow position: chr6:43187031-43187564 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 520

Conread position: 63-569
Cow position: chr6:24632319-24631790 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 10

Conread position: 65-551
Cow position: chr6:52249573-52249070 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 55

Conread position: 67-554
Cow position: chr6:59596188-59596693 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 130

Conread position: 67-562
Cow position: chr6:47573734-47574244 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 5

Conread position: 68-457
Cow position: chr6:58016292-58016692 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 9

Conread position: 70-566
Cow position: chr6:50113624-50114141 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 41

Conread position: 72-487
Cow position: chr6:10365313-10364878 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 287
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 51

Conread position: 72-522
Cow position: chr6:37386088-37386561 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 311
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 104, 95

Conread position: 72-554
Cow position: chr6:33809498-33808986 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 72-554
Cow position: chr6:47150033-47149519 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 160

Conread position: 72-555
Cow position: chr6:1536641-1537154 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 72-562
Cow position: chr6:47171018-47171517 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 164

Conread position: 72-562
Cow position: chr6:55474243-55474762 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 72-569
Cow position: chr6:34493611-34494138 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 72-569
Cow position: chr6:34504585-34504058 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 72-570
Cow position: chr6:52978219-52977703 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 54

Conread position: 73-452
Cow position: chr6:11354234-11353834 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 13

Conread position: 73-561
Cow position: chr6:34074805-34075327 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 261

Conread position: 75-550
Cow position: chr6:53462216-53461735 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 17

Conread position: 76-520
Cow position: chr6:7048942-7049408 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 299
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 92

Conread position: 76-554
Cow position: chr6:11453928-11453419 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 77-537
Cow position: chr6:15924649-15924164 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 94

Conread position: 77-555
Cow position: chr6:10236137-10236641 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 77-562
Cow position: chr6:35600620-35601133 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 501

Conread position: 78-562
Cow position: chr6:727678-727175 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 27

Conread position: 80-562
Cow position: chr6:38438550-38439066 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 88-554
Cow position: chr6:35417008-35416526 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 93

Conread position: 91-569
Cow position: chr6:7105574-7105068 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 257

Conread position: 97-420
Cow position: chr6:65892908-65892566 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 250

Conread position: 97-554
Cow position: chr6:1796588-1797073 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 252

Conread position: 100-553
Cow position: chr6:67448962-67448479 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 104-561
Cow position: chr6:14897152-14897636 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 73

Conread position: 105-553
Cow position: chr6:6120018-6119548 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 209

Conread position: 111-554
Cow position: chr6:63177018-63177491 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 116-532
Cow position: chr6:17556692-17556247 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 235

Conread position: 116-554
Cow position: chr6:452283-451815 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 116-554
Cow position: chr6:2618583-2618119 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 61

Conread position: 121-540
Cow position: chr6:843843-843393 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 127-554
Cow position: chr6:21711695-21712154 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 127-562
Cow position: chr6:34237096-34236641 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 314
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 37, 52

Conread position: 131-495
Cow position: chr6:43039072-43038684 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 23, 64

Conread position: 131-554
Cow position: chr6:6569223-6568786 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 97

Conread position: 131-554
Cow position: chr6:23880061-23879611 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 392

Conread position: 131-562
Cow position: chr6:28481332-28481780 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 46

Conread position: 134-520
Cow position: chr6:49761461-49761877 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 222

Conread position: 134-553
Cow position: chr6:6034799-6034352 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 409

Conread position: 139-532
Cow position: chr6:2367255-2366840 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 237

Conread position: 139-554
Cow position: chr6:21857362-21856927 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 362

Conread position: 148-554
Cow position: chr6:23568578-23568145 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 148-566
Cow position: chr6:57856784-57857229 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 436

Conread position: 150-562
Cow position: chr6:3485402-3484964 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 97

Conread position: 155-554
Cow position: chr6:53672360-53672781 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 129

Conread position: 155-562
Cow position: chr6:32286575-32287009 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 159-524
Cow position: chr6:45736817-45736450 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 106

Conread position: 162-501
Cow position: chr6:46633148-46633513 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 265

Conread position: 162-553
Cow position: chr6:18987172-18987575 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 72

Conread position: 163-501
Cow position: chr6:53741968-53742315 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 5

Conread position: 170-522
Cow position: chr6:47614796-47614427 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 247
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 133

Conread position: 170-553
Cow position: chr6:1834032-1834442 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 170-566
Cow position: chr6:46764365-46763947 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 412

Conread position: 177-553
Cow position: chr6:39136546-39136945 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 311

Conread position: 178-552
Cow position: chr6:46284054-46283654 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 73

Conread position: 179-490
Cow position: chr6:34405347-34405686 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 182-552
Cow position: chr6:35704472-35704071 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 171

Conread position: 182-554
Cow position: chr6:53537124-53537524 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 182-555
Cow position: chr6:29484044-29484427 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 24

Conread position: 188-554
Cow position: chr6:16410115-16410502 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 38

Conread position: 188-554
Cow position: chr6:18804003-18803611 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 191-522
Cow position: chr6:10598062-10598417 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 196-540
Cow position: chr6:13314966-13314596 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 98

Conread position: 198-464
Cow position: chr6:49963888-49963601 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 199-486
Cow position: chr6:4274135-4274449 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 199-555
Cow position: chr6:10681060-10681433 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 34

Conread position: 199-562
Cow position: chr6:24624072-24623687 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 102

Conread position: 200-513
Cow position: chr6:27939101-27939440 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 301

Conread position: 200-554
Cow position: chr6:21163371-21163751 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 10

Conread position: 201-553
Cow position: chr6:42988732-42988358 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 83

Conread position: 205-552
Cow position: chr6:53810664-53811025 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 127

Conread position: 206-553
Cow position: chr6:47539454-47539826 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 248
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 191

Conread position: 206-554
Cow position: chr6:19718658-19719017 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 257

Conread position: 213-540
Cow position: chr6:27094507-27094153 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 165

Conread position: 221-427
Cow position: chr6:9587623-9587849 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 44, 0

Conread position: 221-433
Cow position: chr6:28399684-28399453 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 144

Conread position: 224-554
Cow position: chr6:18912635-18912287 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 295

Conread position: 225-557
Cow position: chr6:6471830-6471485 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 11

Conread position: 226-524
Cow position: chr6:52066028-52065703 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 231-554
Cow position: chr6:28135858-28136199 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 197

Conread position: 237-569
Cow position: chr6:17150060-17149708 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 272

Conread position: 237-569
Cow position: chr6:19044328-19044666 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 94

Conread position: 253-553
Cow position: chr6:4467767-4468068 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 128, 44

Conread position: 253-554
Cow position: chr6:6613446-6613744 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 67

Conread position: 253-554
Cow position: chr6:11401450-11401768 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-555
Cow position: chr6:33300795-33301117 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 253-562
Cow position: chr6:8754324-8754000 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 68

Conread position: 253-563
Cow position: chr6:45666797-45666473 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 48

Conread position: 253-569
Cow position: chr6:55903219-55903554 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 255-554
Cow position: chr6:508390-508073 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 257-520
Cow position: chr6:44510226-44510500 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 123, 11

Conread position: 261-517
Cow position: chr6:18963204-18962944 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 40

Conread position: 261-522
Cow position: chr6:14264116-14263841 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 124, 81

Conread position: 261-555
Cow position: chr6:21588122-21588433 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 261-555
Cow position: chr6:29689003-29689307 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 24

Conread position: 261-555
Cow position: chr6:40251659-40251351 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 60

Conread position: 261-566
Cow position: chr6:1274707-1274395 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 73

Conread position: 261-566
Cow position: chr6:43778844-43779150 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 46

Conread position: 261-566
Cow position: chr6:56925871-56926192 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 315

Conread position: 261-566
Cow position: chr6:62961040-62961356 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 288

Conread position: 262-562
Cow position: chr6:12388315-12388007 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 65

Conread position: 265-477
Cow position: chr6:12099660-12099875 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 120, 28

Conread position: 265-562
Cow position: chr6:51876907-51877210 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 66

Conread position: 272-554
Cow position: chr6:12971546-12971844 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 113, 7

Conread position: 273-562
Cow position: chr6:2111249-2110944 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 276-478
Cow position: chr6:57383569-57383789 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 277-528
Cow position: chr6:17344354-17344621 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 44

Conread position: 277-569
Cow position: chr6:46225808-46225499 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 218

Conread position: 279-555
Cow position: chr6:51673928-51674215 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 99, 141

Conread position: 279-563
Cow position: chr6:7215951-7216252 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 283-554
Cow position: chr6:54472485-54472207 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 58

Conread position: 284-554
Cow position: chr6:45901831-45901542 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 284-554
Cow position: chr6:55361634-55361347 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 285-489
Cow position: chr6:64315388-64315185 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 161, 37

Conread position: 286-554
Cow position: chr6:7448658-7448942 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 270

Conread position: 291-555
Cow position: chr6:27887080-27887360 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 94, 0

Conread position: 292-554
Cow position: chr6:20268143-20267868 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 93, 52

Conread position: 294-554
Cow position: chr6:3987885-3987608 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 300-554
Cow position: chr6:32664925-32664654 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 0

Conread position: 301-554
Cow position: chr6:20581598-20581328 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 84, 0

Conread position: 301-554
Cow position: chr6:48881925-48882191 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 84, 218

Conread position: 301-563
Cow position: chr6:5096628-5096351 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 302-562
Cow position: chr6:65941829-65941553 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 24

Conread position: 303-554
Cow position: chr6:11389434-11389166 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 305-552
Cow position: chr6:6601713-6601463 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 145, 86

Conread position: 309-554
Cow position: chr6:54887405-54887145 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 74, 18

Conread position: 318-554
Cow position: chr6:50526704-50526957 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 319-554
Cow position: chr6:653601-653349 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 328-554
Cow position: chr6:17773191-17773434 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 333-554
Cow position: chr6:63041119-63040885 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 334-554
Cow position: chr6:57329489-57329726 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 338-554
Cow position: chr6:63715061-63714828 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 344-554
Cow position: chr6:20216175-20215948 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 355-554
Cow position: chr6:37216875-37217087 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 357-564
Cow position: chr6:25408455-25408237 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 196

Conread position: 367-562
Cow position: chr6:539393-539592 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 83, 16

Conread position: 369-562
Cow position: chr6:67186797-67186997 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 376-554
Cow position: chr6:27173104-27173289 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 383-562
Cow position: chr6:47380953-47381139 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 383-566
Cow position: chr6:1887526-1887332 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 176

Conread position: 384-567
Cow position: chr6:53739558-53739751 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 186

Conread position: 385-554
Cow position: chr6:26829799-26829975 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 386-498
Cow position: chr6:61632406-61632525 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 386-522
Cow position: chr6:52696857-52697000 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 386-524
Cow position: chr6:6524971-6525109 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 29

Conread position: 386-552
Cow position: chr6:39092890-39093063 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 0

Conread position: 386-553
Cow position: chr6:41233197-41233370 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 63, 29

Conread position: 386-554
Cow position: chr6:1245648-1245473 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chr6:8382212-8382387 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr6:39080190-39080365 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr6:39897790-39897615 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chr6:42897460-42897635 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 386-557
Cow position: chr6:57681257-57681079 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 386-562
Cow position: chr6:43790095-43789913 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 177

Conread position: 386-562
Cow position: chr6:48873051-48872869 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 177

Conread position: 386-566
Cow position: chr6:14199318-14199504 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 177

Conread position: 386-566
Cow position: chr6:56842294-56842481 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 171

Conread position: 386-566
Cow position: chr6:58036554-58036742 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 386-575
Cow position: chr6:2581876-2582070 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 177

Conread position: 389-562
Cow position: chr6:68047642-68047464 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 60, 119

Conread position: 391-562
Cow position: chr6:8535516-8535343 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 168

Conread position: 392-562
Cow position: chr6:27858746-27858912 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 392-562
Cow position: chr6:38873249-38873073 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 171

Conread position: 396-524
Cow position: chr6:2606748-2606882 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 399-554
Cow position: chr6:366347-366499 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 407-557
Cow position: chr6:42616798-42616949 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 98

Show alignments to all cow chromosomes.