Cow genome map

Conread name: rpigcb_7632.y1

Conread position: 23-563
Cow position: chrX:22579659-22579094 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 52

Conread position: 48-562
Cow position: chrX:40070850-40070318 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 55-554
Cow position: chrX:29765757-29766285 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 18

Conread position: 56-499
Cow position: chrX:7120365-7120837 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 56-554
Cow position: chrX:4767461-4767975 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 16

Conread position: 56-554
Cow position: chrX:5289926-5289401 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 56-554
Cow position: chrX:24770098-24769572 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 56-562
Cow position: chrX:22810654-22811182 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 56-562
Cow position: chrX:36691605-36692126 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 81

Conread position: 57-553
Cow position: chrX:15151908-15151391 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 60-457
Cow position: chrX:40828341-40827931 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 12

Conread position: 60-520
Cow position: chrX:41885415-41884928 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 60-522
Cow position: chrX:6656255-6655783 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 12

Conread position: 60-524
Cow position: chrX:9095405-9095897 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 60-554
Cow position: chrX:5865908-5866431 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 60-562
Cow position: chrX:29099182-29099709 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 60-562
Cow position: chrX:29287758-29288286 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 12

Conread position: 60-562
Cow position: chrX:30181162-30180635 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 60-563
Cow position: chrX:21685372-21685917 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 12

Conread position: 60-570
Cow position: chrX:7096221-7096762 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 61-416
Cow position: chrX:24734427-24734801 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-441
Cow position: chrX:20741622-20742018 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-452
Cow position: chrX:17228738-17229140 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-493
Cow position: chrX:16804103-16803643 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-500
Cow position: chrX:27497595-27498060 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-510
Cow position: chrX:22492799-22493272 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-516
Cow position: chrX:4300174-4299711 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-520
Cow position: chrX:23279790-23280275 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-522
Cow position: chrX:33583447-33583947 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 11

Conread position: 61-522
Cow position: chrX:39697531-39698014 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-524
Cow position: chrX:5365828-5365339 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-524
Cow position: chrX:21494199-21494668 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-524
Cow position: chrX:34094469-34094961 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-531
Cow position: chrX:21661781-21662298 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-538
Cow position: chrX:23222263-23221776 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-539
Cow position: chrX:37851901-37852406 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chrX:5360773-5361281 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chrX:9127818-9128327 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chrX:14462084-14462585 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-540
Cow position: chrX:15260852-15260348 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chrX:19608440-19608947 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chrX:24345812-24346320 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chrX:29912104-29912610 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-540
Cow position: chrX:30053705-30053197 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-552
Cow position: chrX:21343159-21343680 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 12

Conread position: 61-553
Cow position: chrX:23342228-23341707 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-554
Cow position: chrX:672228-671708 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:2560184-2559675 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 11

Conread position: 61-554
Cow position: chrX:2579184-2579704 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:2813712-2813197 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:3360585-3361106 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:4342515-4343036 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:5647341-5646819 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:6371943-6372465 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:7484570-7485092 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:7754669-7755190 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:8435435-8434915 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:9642665-9642147 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:11146572-11146048 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 61-554
Cow position: chrX:11409571-11409049 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:11462230-11461711 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:11976683-11976161 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:12144862-12145386 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:14125482-14124961 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-554
Cow position: chrX:14597620-14598131 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:14802056-14801536 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-554
Cow position: chrX:16085895-16085373 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:16809050-16808529 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-554
Cow position: chrX:17054334-17054854 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:17782264-17782785 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:18024229-18023707 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:18488950-18488429 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:18657042-18656520 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:19398541-19399063 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:20357236-20356710 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:22077577-22077057 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:24316579-24317107 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:24412790-24413315 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:26230995-26230473 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:27304694-27305214 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:27758472-27758992 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:28753573-28753055 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-554
Cow position: chrX:29082839-29083352 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-554
Cow position: chrX:29225241-29225763 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:29908439-29907917 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:30200224-30199707 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:30836150-30836672 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-554
Cow position: chrX:30965223-30964701 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:31495500-31496021 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-554
Cow position: chrX:31979076-31978557 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:32064404-32063886 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:34760829-34761351 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 11

Conread position: 61-554
Cow position: chrX:35532619-35533139 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:36194859-36195377 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 12

Conread position: 61-554
Cow position: chrX:38231504-38230982 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:39548166-39548684 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:39560897-39560367 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-554
Cow position: chrX:39713314-39713836 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chrX:4906232-4905704 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 11

Conread position: 61-555
Cow position: chrX:16782047-16782566 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 61-555
Cow position: chrX:21226244-21226763 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 12

Conread position: 61-555
Cow position: chrX:21818685-21818194 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-555
Cow position: chrX:23022081-23022599 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chrX:23387772-23387252 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-555
Cow position: chrX:23395370-23395893 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-555
Cow position: chrX:23573054-23572530 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-555
Cow position: chrX:26446864-26447365 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-555
Cow position: chrX:35287189-35287711 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-556
Cow position: chrX:27070598-27071131 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 264

Conread position: 61-557
Cow position: chrX:4623190-4622665 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-559
Cow position: chrX:29759464-29759978 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-560
Cow position: chrX:27423507-27422993 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-560
Cow position: chrX:30172943-30172417 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-560
Cow position: chrX:37080751-37080229 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 11

Conread position: 61-562
Cow position: chrX:322679-323207 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:1549728-1550257 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:13406523-13405998 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:16040914-16040387 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 12

Conread position: 61-562
Cow position: chrX:16525554-16526082 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-562
Cow position: chrX:16854602-16854094 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:18193453-18193982 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:21582205-21582735 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:24292903-24292387 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:26530736-26531265 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:27317994-27318523 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-562
Cow position: chrX:27591257-27590738 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 11

Conread position: 61-562
Cow position: chrX:27615576-27616100 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:27978068-27977542 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-562
Cow position: chrX:30135550-30135055 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:30164467-30163946 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 11

Conread position: 61-562
Cow position: chrX:30229348-30228822 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-562
Cow position: chrX:31201604-31202133 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-562
Cow position: chrX:31728230-31728753 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 12

Conread position: 61-562
Cow position: chrX:41156075-41156603 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-563
Cow position: chrX:3650064-3649530 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 11

Conread position: 61-563
Cow position: chrX:15978188-15977655 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-565
Cow position: chrX:32328965-32329506 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-566
Cow position: chrX:5248155-5248681 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 61-566
Cow position: chrX:6236083-6235560 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-566
Cow position: chrX:7552038-7551505 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-566
Cow position: chrX:10529021-10528490 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 61-566
Cow position: chrX:12307999-12307466 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-566
Cow position: chrX:15621768-15621236 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-566
Cow position: chrX:16702445-16702967 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 11

Conread position: 61-566
Cow position: chrX:16710730-16711252 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 11

Conread position: 61-566
Cow position: chrX:20953300-20953829 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-566
Cow position: chrX:21592056-21592587 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-566
Cow position: chrX:24175183-24174655 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 61-566
Cow position: chrX:26442486-26441960 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 61-569
Cow position: chrX:7572154-7572685 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-569
Cow position: chrX:21832649-21833172 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 61-570
Cow position: chrX:22818837-22819380 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 61-571
Cow position: chrX:27754191-27754728 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 61-577
Cow position: chrX:29941941-29942463 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 62-553
Cow position: chrX:24483598-24483083 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 10

Conread position: 62-554
Cow position: chrX:14782581-14782060 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 10

Conread position: 62-554
Cow position: chrX:21793355-21793876 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 10

Conread position: 62-554
Cow position: chrX:23986014-23986535 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 10

Conread position: 62-555
Cow position: chrX:32145492-32144978 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-562
Cow position: chrX:18950968-18950444 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 62-562
Cow position: chrX:29891865-29892379 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 10

Conread position: 62-569
Cow position: chrX:18222177-18222717 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 10

Conread position: 63-524
Cow position: chrX:22612166-22612658 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-553
Cow position: chrX:35938296-35937792 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 9

Conread position: 63-554
Cow position: chrX:2047877-2048397 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 63-554
Cow position: chrX:20020337-20020864 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 9

Conread position: 63-554
Cow position: chrX:26274904-26275423 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 63-554
Cow position: chrX:28518948-28518435 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 145

Conread position: 63-566
Cow position: chrX:28624990-28624465 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 378

Conread position: 63-566
Cow position: chrX:29916582-29916050 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 480

Conread position: 64-551
Cow position: chrX:11744036-11744549 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 9

Conread position: 65-451
Cow position: chrX:12997143-12996735 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 65-554
Cow position: chrX:16278423-16278937 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 65-554
Cow position: chrX:38962083-38961565 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 65-555
Cow position: chrX:16360239-16359721 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 66-553
Cow position: chrX:10867088-10866585 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 6

Conread position: 67-563
Cow position: chrX:34221544-34222059 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 5

Conread position: 68-554
Cow position: chrX:3373082-3372568 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 5

Conread position: 72-516
Cow position: chrX:30165887-30165415 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 387

Conread position: 72-524
Cow position: chrX:15122386-15121906 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 60

Conread position: 72-540
Cow position: chrX:21767573-21768075 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 72-553
Cow position: chrX:2299668-2300165 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 39

Conread position: 72-553
Cow position: chrX:2382239-2382751 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 499

Conread position: 72-553
Cow position: chrX:3406553-3406057 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 101

Conread position: 72-553
Cow position: chrX:5320940-5320433 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 146

Conread position: 72-553
Cow position: chrX:9011107-9011611 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 23

Conread position: 72-554
Cow position: chrX:2008923-2008418 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 166

Conread position: 72-554
Cow position: chrX:19474375-19473874 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 408

Conread position: 72-554
Cow position: chrX:23134370-23134864 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 271

Conread position: 72-554
Cow position: chrX:28879803-28879308 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 63

Conread position: 72-554
Cow position: chrX:30059669-30060174 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 139

Conread position: 72-555
Cow position: chrX:17891317-17891832 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 72-555
Cow position: chrX:22539261-22538747 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 72-562
Cow position: chrX:22869592-22870114 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 61

Conread position: 72-562
Cow position: chrX:25818044-25817530 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 324

Conread position: 72-562
Cow position: chrX:38228537-38228021 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 101

Conread position: 72-566
Cow position: chrX:25282721-25282197 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 99

Conread position: 72-566
Cow position: chrX:29880506-29879984 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 179

Conread position: 72-566
Cow position: chrX:44193663-44193144 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 510

Conread position: 72-571
Cow position: chrX:10413197-10412674 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 69

Conread position: 73-441
Cow position: chrX:9228127-9227738 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 276

Conread position: 73-524
Cow position: chrX:26617897-26618379 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 73-554
Cow position: chrX:11074385-11073914 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 22

Conread position: 73-562
Cow position: chrX:42222988-42222483 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 58

Conread position: 74-524
Cow position: chrX:13928967-13928487 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 74-562
Cow position: chrX:29791036-29790526 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 13

Conread position: 77-566
Cow position: chrX:25847601-25848097 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 154

Conread position: 79-562
Cow position: chrX:41847748-41847238 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 26

Conread position: 79-566
Cow position: chrX:24109815-24109309 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 32

Conread position: 80-522
Cow position: chrX:26508017-26508480 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 15

Conread position: 81-528
Cow position: chrX:6279821-6279348 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 98

Conread position: 81-562
Cow position: chrX:24588952-24588444 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 169

Conread position: 81-566
Cow position: chrX:31261832-31261337 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 70

Conread position: 83-554
Cow position: chrX:9899552-9899059 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 249

Conread position: 86-480
Cow position: chrX:38998634-38999042 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 60

Conread position: 89-562
Cow position: chrX:42732662-42733164 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 497

Conread position: 92-569
Cow position: chrX:39556978-39556492 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 62

Conread position: 97-524
Cow position: chrX:8482246-8482702 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 217

Conread position: 97-554
Cow position: chrX:6453496-6453982 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 150

Conread position: 97-554
Cow position: chrX:14050395-14049910 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 472

Conread position: 97-562
Cow position: chrX:22809063-22809546 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 291

Conread position: 98-569
Cow position: chrX:4406684-4407183 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 102

Conread position: 101-585
Cow position: chrX:27451220-27450731 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 34

Conread position: 105-554
Cow position: chrX:6406177-6406634 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 41

Conread position: 105-554
Cow position: chrX:6870756-6870279 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 182

Conread position: 105-562
Cow position: chrX:34442622-34442150 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 216

Conread position: 106-522
Cow position: chrX:6201340-6201780 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 200

Conread position: 107-444
Cow position: chrX:6854905-6854549 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 203

Conread position: 112-554
Cow position: chrX:2103219-2103690 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 15

Conread position: 112-554
Cow position: chrX:16087310-16086838 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 113-563
Cow position: chrX:45401188-45400722 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 99

Conread position: 123-422
Cow position: chrX:29779890-29779583 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 30, 214

Conread position: 129-554
Cow position: chrX:45374270-45373823 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 73

Conread position: 130-552
Cow position: chrX:17890020-17889578 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 157

Conread position: 130-562
Cow position: chrX:15140699-15140243 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 131-554
Cow position: chrX:10445581-10445130 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 101

Conread position: 134-567
Cow position: chrX:16465142-16465598 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 436

Conread position: 135-463
Cow position: chrX:2145814-2146160 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 18, 191

Conread position: 144-566
Cow position: chrX:38852008-38852455 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 190

Conread position: 148-552
Cow position: chrX:10439056-10438643 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 66

Conread position: 148-553
Cow position: chrX:17664063-17663634 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 199

Conread position: 148-554
Cow position: chrX:36729236-36729669 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 148-562
Cow position: chrX:23452595-23452153 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 437

Conread position: 149-524
Cow position: chrX:30455763-30455366 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 185

Conread position: 152-554
Cow position: chrX:11499918-11499491 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 179

Conread position: 153-554
Cow position: chrX:32643343-32643771 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 155-452
Cow position: chrX:29930533-29930216 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 155-554
Cow position: chrX:25289820-25289394 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 159-559
Cow position: chrX:20674731-20675158 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 159-562
Cow position: chrX:40693868-40693437 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 32

Conread position: 162-553
Cow position: chrX:30681632-30681220 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 122

Conread position: 162-553
Cow position: chrX:34993055-34993464 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 281
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 103, 32

Conread position: 178-553
Cow position: chrX:8590462-8590866 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 179-549
Cow position: chrX:3155697-3155305 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 151

Conread position: 179-563
Cow position: chrX:18243876-18244279 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 152

Conread position: 183-554
Cow position: chrX:10059353-10059750 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 123

Conread position: 185-554
Cow position: chrX:17994351-17994744 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 139

Conread position: 185-562
Cow position: chrX:12289624-12290014 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 117

Conread position: 187-522
Cow position: chrX:20792033-20792389 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 78, 42

Conread position: 187-554
Cow position: chrX:17290073-17290465 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 174

Conread position: 188-554
Cow position: chrX:33685023-33685416 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 188-554
Cow position: chrX:37404337-37403949 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 196-554
Cow position: chrX:26760668-26760283 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 199-551
Cow position: chrX:41791816-41791433 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 199-554
Cow position: chrX:46296565-46296945 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 341

Conread position: 199-569
Cow position: chrX:12310482-12310090 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 132

Conread position: 202-554
Cow position: chrX:28503242-28503621 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 205-555
Cow position: chrX:22118585-22118210 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 338

Conread position: 206-566
Cow position: chrX:40225324-40224946 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 320

Conread position: 214-562
Cow position: chrX:47000735-47000359 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 216-445
Cow position: chrX:29047035-29047284 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 221-440
Cow position: chrX:21750307-21750081 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 164, 144

Conread position: 221-562
Cow position: chrX:35023995-35024352 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 9

Conread position: 221-564
Cow position: chrX:36839639-36840001 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 15

Conread position: 235-538
Cow position: chrX:15175597-15175283 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 150, 15

Conread position: 246-553
Cow position: chrX:2486670-2486348 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 139, 22

Conread position: 253-427
Cow position: chrX:24928375-24928191 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 132, 0

Conread position: 253-501
Cow position: chrX:9764104-9763840 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 258

Conread position: 253-523
Cow position: chrX:24279884-24280174 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 253-532
Cow position: chrX:15040095-15039806 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 132, 61

Conread position: 253-532
Cow position: chrX:44901111-44901400 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 133, 171

Conread position: 253-539
Cow position: chrX:28058289-28058592 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-540
Cow position: chrX:22838239-22838543 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-540
Cow position: chrX:33763112-33763416 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-552
Cow position: chrX:25573320-25573632 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 132, 22

Conread position: 253-554
Cow position: chrX:3418169-3417852 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 278

Conread position: 253-554
Cow position: chrX:3465107-3464792 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 83

Conread position: 253-554
Cow position: chrX:13031683-13031367 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 180

Conread position: 253-554
Cow position: chrX:13205922-13206237 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-554
Cow position: chrX:30160022-30159706 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 68

Conread position: 253-554
Cow position: chrX:39185140-39185458 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 253-555
Cow position: chrX:2500663-2500345 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 238

Conread position: 253-562
Cow position: chrX:27095104-27095421 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 80

Conread position: 253-562
Cow position: chrX:32584963-32584639 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 319

Conread position: 253-562
Cow position: chrX:38150656-38150980 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 66

Conread position: 253-594
Cow position: chrX:2649383-2649029 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 113, 239

Conread position: 261-416
Cow position: chrX:2933027-2932862 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 261-519
Cow position: chrX:40184048-40184323 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 261-554
Cow position: chrX:5280877-5280568 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 261-554
Cow position: chrX:12345871-12346181 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 261-592
Cow position: chrX:33804011-33803673 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 76

Conread position: 262-557
Cow position: chrX:18455794-18455482 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 99, 59

Conread position: 262-562
Cow position: chrX:1056411-1056094 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 312

Conread position: 263-550
Cow position: chrX:38217957-38218258 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 115, 58

Conread position: 263-562
Cow position: chrX:12465017-12465324 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 11

Conread position: 265-554
Cow position: chrX:39731158-39730854 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 265-562
Cow position: chrX:12178653-12178971 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 313

Conread position: 266-554
Cow position: chrX:12651837-12651536 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 41

Conread position: 269-566
Cow position: chrX:28867032-28866716 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 307

Conread position: 270-420
Cow position: chrX:28766124-28765964 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 115, 0

Conread position: 274-562
Cow position: chrX:21626710-21626402 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 84

Conread position: 275-562
Cow position: chrX:4995603-4995903 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 283-563
Cow position: chrX:37117906-37118204 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 82, 73

Conread position: 284-457
Cow position: chrX:41879921-41879748 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 101, 50

Conread position: 285-554
Cow position: chrX:2293601-2293315 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 285-554
Cow position: chrX:44053815-44054090 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 169

Conread position: 289-554
Cow position: chrX:29842175-29841884 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 241

Conread position: 291-522
Cow position: chrX:16046153-16046400 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 28

Conread position: 291-562
Cow position: chrX:39701876-39702146 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 159, 15

Conread position: 293-554
Cow position: chrX:22125848-22125570 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 295-540
Cow position: chrX:39939744-39939482 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 82, 0

Conread position: 296-554
Cow position: chrX:38330394-38330667 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 297-553
Cow position: chrX:39559342-39559079 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 81, 0

Conread position: 301-554
Cow position: chrX:5392560-5392290 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 0

Conread position: 301-554
Cow position: chrX:30196313-30196582 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 237

Conread position: 301-562
Cow position: chrX:21063490-21063763 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 84, 19

Conread position: 301-566
Cow position: chrX:150495-150768 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 69, 35

Conread position: 303-564
Cow position: chrX:6766717-6766441 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 75, 262

Conread position: 308-555
Cow position: chrX:37134611-37134347 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 77, 0

Conread position: 308-562
Cow position: chrX:28156562-28156827 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 77, 26

Conread position: 314-562
Cow position: chrX:22601380-22601119 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 64, 11

Conread position: 319-569
Cow position: chrX:4751329-4751069 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 0

Conread position: 320-562
Cow position: chrX:23415661-23415403 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 246

Conread position: 325-562
Cow position: chrX:23317370-23317120 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 115

Conread position: 326-562
Cow position: chrX:35239912-35240158 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 194

Conread position: 327-563
Cow position: chrX:15113713-15113970 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 329-554
Cow position: chrX:11565957-11566199 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 332-553
Cow position: chrX:16021329-16021092 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 332-562
Cow position: chrX:6543313-6543556 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 10

Conread position: 332-569
Cow position: chrX:41527463-41527211 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 334-554
Cow position: chrX:5124311-5124074 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 337-518
Cow position: chrX:45042479-45042679 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 367-566
Cow position: chrX:35847317-35847521 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 32

Conread position: 378-554
Cow position: chrX:14459066-14458882 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 378-562
Cow position: chrX:38935525-38935714 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 8

Conread position: 378-577
Cow position: chrX:7805482-7805690 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 101

Conread position: 383-554
Cow position: chrX:5406167-5406345 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 383-554
Cow position: chrX:26974017-26974195 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 386-524
Cow position: chrX:13912203-13912347 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 124

Conread position: 386-524
Cow position: chrX:27750358-27750502 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 106

Conread position: 386-540
Cow position: chrX:34518836-34518997 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 386-553
Cow position: chrX:24442129-24441955 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chrX:2159875-2160050 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chrX:8529650-8529825 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chrX:13031101-13030926 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chrX:15091654-15091483 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 123

Conread position: 386-554
Cow position: chrX:18898539-18898364 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 386-554
Cow position: chrX:19109931-19109756 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chrX:28313535-28313710 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chrX:36479525-36479350 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 386-554
Cow position: chrX:39293108-39292933 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 386-554
Cow position: chrX:45236576-45236751 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 386-554
Cow position: chrX:45658967-45658792 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 386-555
Cow position: chrX:31372572-31372748 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 144

Conread position: 386-557
Cow position: chrX:40268591-40268772 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 101

Conread position: 386-562
Cow position: chrX:865506-865688 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 177

Conread position: 386-562
Cow position: chrX:11950376-11950194 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 162

Conread position: 386-562
Cow position: chrX:14162302-14162484 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 64, 177

Conread position: 386-562
Cow position: chrX:25459529-25459346 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 178

Conread position: 386-563
Cow position: chrX:8144768-8144587 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 386-563
Cow position: chrX:23969464-23969643 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 112

Conread position: 386-566
Cow position: chrX:11855275-11855465 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 386-569
Cow position: chrX:27704709-27704902 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 387-554
Cow position: chrX:40581052-40580878 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 387-554
Cow position: chrX:45903288-45903462 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 387-562
Cow position: chrX:40365634-40365451 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 388-555
Cow position: chrX:29722344-29722505 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 390-562
Cow position: chrX:19657611-19657789 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 164

Conread position: 392-554
Cow position: chrX:37815707-37815876 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 392-562
Cow position: chrX:37488845-37489023 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 396-554
Cow position: chrX:20032711-20032546 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 403-566
Cow position: chrX:16688395-16688564 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 160

Conread position: 406-557
Cow position: chrX:24174031-24173873 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.