Cow genome map
| Conread name: | rpigcb_9121.y1 |
| Conread position: | 275-454 |
| Cow position: | chr11:22468863-22468679 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 318-493 |
| Cow position: | chr11:81930984-81931155 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 334-476 |
| Cow position: | chr11:60486302-60486446 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 334-501 |
| Cow position: | chr11:30808477-30808644 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 138 |
| Conread position: | 341-453 |
| Cow position: | chr11:2835968-2835854 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 341-463 |
| Cow position: | chr11:42016530-42016653 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 341-466 |
| Cow position: | chr11:12555196-12555323 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 341-494 |
| Cow position: | chr11:62889784-62889938 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 341-496 |
| Cow position: | chr11:3714930-3714779 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 109 |
| Conread position: | 341-497 |
| Cow position: | chr11:30925264-30925109 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 52 |
| Conread position: | 341-498 |
| Cow position: | chr11:5789790-5789950 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 341-498 |
| Cow position: | chr11:26632904-26633060 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 341-505 |
| Cow position: | chr11:71492752-71492915 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 54, 100 |
| Conread position: | 341-509 |
| Cow position: | chr11:15369497-15369327 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 129 |
| Conread position: | 341-516 |
| Cow position: | chr11:15772605-15772779 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 341-521 |
| Cow position: | chr11:40459218-40459040 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 341-523 |
| Cow position: | chr11:50472426-50472245 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 54, 120 |
| Conread position: | 343-521 |
| Cow position: | chr11:67912044-67912223 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 345-447 |
| Cow position: | chr11:70600723-70600827 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 345-453 |
| Cow position: | chr11:60720350-60720460 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 345-461 |
| Cow position: | chr11:60296835-60296718 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 345-471 |
| Cow position: | chr11:46884479-46884351 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 345-479 |
| Cow position: | chr11:18508925-18509060 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 50, 125 |
| Conread position: | 345-479 |
| Cow position: | chr11:64409076-64408947 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 345-492 |
| Cow position: | chr11:15373945-15373796 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 345-495 |
| Cow position: | chr11:62811402-62811252 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 126 |
| Conread position: | 345-501 |
| Cow position: | chr11:8683974-8684132 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 146 |
| Conread position: | 345-501 |
| Cow position: | chr11:37435882-37436038 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 50, 122 |
| Conread position: | 345-504 |
| Cow position: | chr11:17278570-17278726 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 345-504 |
| Cow position: | chr11:36799202-36799362 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 345-504 |
| Cow position: | chr11:55744573-55744413 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 345-508 |
| Cow position: | chr11:30209717-30209881 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 51, 80 |
| Conread position: | 345-509 |
| Cow position: | chr11:33414342-33414176 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-511 |
| Cow position: | chr11:29659666-29659499 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 345-521 |
| Cow position: | chr11:21508110-21507933 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 345-522 |
| Cow position: | chr11:13043040-13043217 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 148 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 345-522 |
| Cow position: | chr11:26143990-26144168 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 50, 123 |
| Conread position: | 345-522 |
| Cow position: | chr11:37804448-37804627 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-522 |
| Cow position: | chr11:39462729-39462550 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 345-523 |
| Cow position: | chr11:6233774-6233952 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-523 |
| Cow position: | chr11:64351685-64351866 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-523 |
| Cow position: | chr11:79728562-79728741 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 346-451 |
| Cow position: | chr11:66041383-66041276 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-454 |
| Cow position: | chr11:81614409-81614519 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-455 |
| Cow position: | chr11:36917674-36917783 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 346-459 |
| Cow position: | chr11:32615841-32615725 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 346-462 |
| Cow position: | chr11:37335985-37336102 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 346-462 |
| Cow position: | chr11:49396421-49396539 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-463 |
| Cow position: | chr11:86895481-86895362 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-464 |
| Cow position: | chr11:15366868-15366988 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-465 |
| Cow position: | chr11:18189632-18189752 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 346-465 |
| Cow position: | chr11:21830107-21830226 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 346-465 |
| Cow position: | chr11:42084571-42084692 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-465 |
| Cow position: | chr11:70517490-70517610 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 346-469 |
| Cow position: | chr11:17517503-17517378 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 346-469 |
| Cow position: | chr11:25783817-25783692 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-473 |
| Cow position: | chr11:37100069-37100193 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 346-475 |
| Cow position: | chr11:41215837-41215707 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 126 |
| Conread position: | 346-479 |
| Cow position: | chr11:2344359-2344221 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 12, 130 |
| Conread position: | 346-479 |
| Cow position: | chr11:66939488-66939622 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 346-482 |
| Cow position: | chr11:62168227-62168363 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 346-483 |
| Cow position: | chr11:69415494-69415630 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 93 |
| Conread position: | 346-483 |
| Cow position: | chr11:69417506-69417370 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 93 |
| Conread position: | 346-492 |
| Cow position: | chr11:34136345-34136201 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 110 |
| Conread position: | 346-492 |
| Cow position: | chr11:41213155-41213000 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 346-494 |
| Cow position: | chr11:35351936-35352083 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 108 |
| Conread position: | 346-494 |
| Cow position: | chr11:45849393-45849544 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 346-494 |
| Cow position: | chr11:56290616-56290467 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-495 |
| Cow position: | chr11:29983614-29983762 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 346-496 |
| Cow position: | chr11:35669848-35669998 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 125 |
| Conread position: | 346-496 |
| Cow position: | chr11:82730893-82731044 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 126 |
| Conread position: | 346-497 |
| Cow position: | chr11:2933251-2933097 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 128 |
| Conread position: | 346-497 |
| Cow position: | chr11:27907879-27907735 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 346-497 |
| Cow position: | chr11:35109434-35109585 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 346-497 |
| Cow position: | chr11:63485042-63484899 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 108 |
| Conread position: | 346-498 |
| Cow position: | chr11:5219056-5219207 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 97 |
| Conread position: | 346-498 |
| Cow position: | chr11:25791590-25791742 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 115 |
| Conread position: | 346-498 |
| Cow position: | chr11:33697741-33697593 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 346-498 |
| Cow position: | chr11:61137070-61137223 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-498 |
| Cow position: | chr11:65826646-65826799 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 346-501 |
| Cow position: | chr11:6245418-6245267 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 346-501 |
| Cow position: | chr11:39854913-39855064 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 346-502 |
| Cow position: | chr11:21910523-21910679 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 346-502 |
| Cow position: | chr11:22747226-22747379 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 346-516 |
| Cow position: | chr11:71807462-71807636 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 117 |
| Conread position: | 346-516 |
| Cow position: | chr11:76890150-76889982 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-518 |
| Cow position: | chr11:70422493-70422658 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 346-519 |
| Cow position: | chr11:68173637-68173462 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 127 |
| Conread position: | 346-519 |
| Cow position: | chr11:78380960-78381127 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 346-520 |
| Cow position: | chr11:18543406-18543575 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 346-521 |
| Cow position: | chr11:2084248-2084071 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-521 |
| Cow position: | chr11:19247095-19247270 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 346-521 |
| Cow position: | chr11:33311082-33310901 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 346-521 |
| Cow position: | chr11:71868498-71868674 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-522 |
| Cow position: | chr11:1067335-1067514 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-522 |
| Cow position: | chr11:7924489-7924662 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 346-522 |
| Cow position: | chr11:33345550-33345372 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-522 |
| Cow position: | chr11:35573387-35573560 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 346-522 |
| Cow position: | chr11:47837424-47837246 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 346-522 |
| Cow position: | chr11:57503582-57503410 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 149, 50 |
| Conread position: | 346-522 |
| Cow position: | chr11:63435625-63435446 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 89 |
| Conread position: | 346-523 |
| Cow position: | chr11:11125767-11125590 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 346-523 |
| Cow position: | chr11:13592840-13592664 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 149 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr11:17831118-17831293 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 346-523 |
| Cow position: | chr11:19591890-19592063 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 346-523 |
| Cow position: | chr11:25620286-25620472 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 134 |
| Conread position: | 346-523 |
| Cow position: | chr11:38236356-38236179 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr11:45283033-45282855 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 126 |
| Conread position: | 346-523 |
| Cow position: | chr11:46747756-46747937 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr11:48474808-48474631 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr11:48660039-48659859 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 48, 126 |
| Conread position: | 346-523 |
| Cow position: | chr11:62778546-62778374 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 346-523 |
| Cow position: | chr11:70086437-70086256 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 346-523 |
| Cow position: | chr11:72333693-72333520 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 346-523 |
| Cow position: | chr11:84385534-84385708 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 347-464 |
| Cow position: | chr11:81605961-81605843 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 347-464 |
| Cow position: | chr11:87171973-87172092 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 347-478 |
| Cow position: | chr11:43914395-43914263 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 347-523 |
| Cow position: | chr11:7560103-7559925 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 347-523 |
| Cow position: | chr11:53510399-53510574 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 347-523 |
| Cow position: | chr11:84228615-84228785 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 348-452 |
| Cow position: | chr11:79666159-79666265 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 348-463 |
| Cow position: | chr11:37982475-37982592 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 349-523 |
| Cow position: | chr11:1157747-1157574 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 87 |
| Conread position: | 350-483 |
| Cow position: | chr11:6395852-6395722 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 350-501 |
| Cow position: | chr11:63919953-63920105 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 350-522 |
| Cow position: | chr11:39060502-39060671 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 51, 121 |
| Conread position: | 350-522 |
| Cow position: | chr11:41985945-41986115 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 124 |
| Conread position: | 351-463 |
| Cow position: | chr11:62808407-62808520 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 351-487 |
| Cow position: | chr11:62742546-62742680 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 83 |
| Conread position: | 351-507 |
| Cow position: | chr11:69168686-69168528 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 351-522 |
| Cow position: | chr11:66518584-66518418 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 147, 45 |
| Conread position: | 351-522 |
| Cow position: | chr11:83926142-83925979 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 351-523 |
| Cow position: | chr11:6202543-6202374 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 37, 122 |
| Conread position: | 351-523 |
| Cow position: | chr11:8988132-8988299 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 351-523 |
| Cow position: | chr11:19946529-19946362 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 351-523 |
| Cow position: | chr11:21844039-21844207 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 147, 82 |
| Conread position: | 351-523 |
| Cow position: | chr11:49153048-49152879 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 351-523 |
| Cow position: | chr11:83033140-83033309 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 352-463 |
| Cow position: | chr11:65842976-65843088 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 62 |
| Conread position: | 352-469 |
| Cow position: | chr11:15682881-15683000 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 352-497 |
| Cow position: | chr11:61454418-61454560 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 352-498 |
| Cow position: | chr11:71110990-71110843 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 352-516 |
| Cow position: | chr11:30638851-30639013 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 352-521 |
| Cow position: | chr11:8147800-8147969 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 352-523 |
| Cow position: | chr11:3740052-3739880 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 352-523 |
| Cow position: | chr11:8544919-8545085 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 352-523 |
| Cow position: | chr11:40792606-40792780 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 353-521 |
| Cow position: | chr11:21894064-21894227 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 353-523 |
| Cow position: | chr11:46999076-46998912 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 354-523 |
| Cow position: | chr11:30370201-30370035 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 355-514 |
| Cow position: | chr11:13500111-13499952 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 40, 103 |
| Conread position: | 355-520 |
| Cow position: | chr11:377546-377713 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 355-521 |
| Cow position: | chr11:56288640-56288477 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 355-522 |
| Cow position: | chr11:36920479-36920651 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 356-505 |
| Cow position: | chr11:62754223-62754374 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 39, 119 |
| Conread position: | 356-522 |
| Cow position: | chr11:14466392-14466560 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 17 |
| Conread position: | 357-522 |
| Cow position: | chr11:42083562-42083400 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 357-523 |
| Cow position: | chr11:48232921-48232750 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 357-523 |
| Cow position: | chr11:53778710-53778543 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 383-520 |
| Cow position: | chr11:41175881-41176019 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 394-521 |
| Cow position: | chr11:18340985-18341111 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 410-523 |
| Cow position: | chr11:48041994-48042108 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 66 |
Show alignments to all cow chromosomes.