Cow genome map

Conread name: rpigcb_9121.y1

Conread position: 270-522
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 126, 48

Conread position: 332-523
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 63, 140

Conread position: 335-523
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 137

Conread position: 340-521
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 55, 75

Conread position: 341-486
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 98

Conread position: 341-505
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 117

Conread position: 341-516
Cow position:
Alignm length: 178
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 97

Conread position: 341-521
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 139

Conread position: 341-522
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 42

Conread position: 341-523
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 96

Conread position: 343-523
Cow position:
Alignm length: 184
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 129

Conread position: 344-523
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 149

Conread position: 345-472
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 345-475
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 85

Conread position: 345-478
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 80

Conread position: 345-492
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 79

Conread position: 345-496
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 129

Conread position: 345-496
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 50, 129

Conread position: 345-498
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 17

Conread position: 345-501
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 85

Conread position: 345-520
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 127

Conread position: 345-522
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 127

Conread position: 345-522
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 48, 14

Conread position: 345-523
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 132

Conread position: 345-523
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 127

Conread position: 345-523
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 127

Conread position: 345-523
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 129

Conread position: 345-523
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 92

Conread position: 346-447
Cow position:
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 346-452
Cow position:
Alignm length: 109
Alignm identity: 94
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 346-455
Cow position:
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 346-455
Cow position:
Alignm length: 112
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 346-458
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 49, 42

Conread position: 346-463
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 346-464
Cow position:
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 346-465
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 346-465
Cow position:
Alignm length: 122
Alignm identity: 102
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 346-465
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 346-466
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 346-469
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 346-475
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 346-479
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 73

Conread position: 346-486
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 126

Conread position: 346-487
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 49, 126

Conread position: 346-487
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 346-487
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 94

Conread position: 346-494
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 49, 126

Conread position: 346-494
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 49, 13

Conread position: 346-495
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 346-497
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 127

Conread position: 346-497
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 49, 68

Conread position: 346-497
Cow position:
Alignm length: 154
Alignm identity: 125
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 126

Conread position: 346-497
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 14

Conread position: 346-498
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 9

Conread position: 346-498
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 122

Conread position: 346-501
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 116

Conread position: 346-501
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 49, 126

Conread position: 346-502
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 82

Conread position: 346-505
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 45

Conread position: 346-508
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 113

Conread position: 346-516
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 14

Conread position: 346-517
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 151, 95

Conread position: 346-519
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 89

Conread position: 346-519
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 122

Conread position: 346-520
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 346-520
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 14

Conread position: 346-520
Cow position:
Alignm length: 177
Alignm identity: 144
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 49, 126

Conread position: 346-521
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 49, 71

Conread position: 346-521
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 49, 128

Conread position: 346-522
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 81

Conread position: 346-522
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 126

Conread position: 346-522
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 134

Conread position: 346-522
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 49, 127

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 78

Conread position: 346-523
Cow position:
Alignm length: 187
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 49, 40

Conread position: 346-523
Cow position:
Alignm length: 181
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 49, 122

Conread position: 346-523
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 150, 50

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 14

Conread position: 346-523
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 132

Conread position: 346-523
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 128

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position:
Alignm length: 182
Alignm identity: 146
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 85

Conread position: 346-523
Cow position:
Alignm length: 184
Alignm identity: 150
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 49, 71

Conread position: 346-523
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 79

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 96

Conread position: 346-523
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 49, 130

Conread position: 346-523
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 132

Conread position: 346-523
Cow position:
Alignm length: 184
Alignm identity: 148
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 49, 126

Conread position: 347-449
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 347-456
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 347-460
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 347-463
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 347-476
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 347-491
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 98

Conread position: 347-497
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 15, 128

Conread position: 347-498
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 48, 125

Conread position: 347-501
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 125

Conread position: 347-501
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 124

Conread position: 347-512
Cow position:
Alignm length: 168
Alignm identity: 136
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 48, 125

Conread position: 347-523
Cow position:
Alignm length: 182
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 101

Conread position: 347-523
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 129

Conread position: 347-523
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 94

Conread position: 348-478
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 87

Conread position: 348-521
Cow position:
Alignm length: 178
Alignm identity: 143
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 47, 86

Conread position: 348-523
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 110

Conread position: 349-462
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 349-523
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 123

Conread position: 350-464
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 350-464
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 350-492
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 5

Conread position: 350-498
Cow position:
Alignm length: 151
Alignm identity: 122
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 122

Conread position: 350-501
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 137

Conread position: 350-523
Cow position:
Alignm length: 183
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 125

Conread position: 351-466
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 351-486
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 73

Conread position: 351-493
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 123

Conread position: 351-494
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 127

Conread position: 351-501
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 43

Conread position: 351-522
Cow position:
Alignm length: 174
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 9

Conread position: 351-523
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 8, 125

Conread position: 351-523
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 44, 122

Conread position: 351-523
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 37

Conread position: 352-491
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 120

Conread position: 352-523
Cow position:
Alignm length: 174
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 120

Conread position: 352-523
Cow position:
Alignm length: 174
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 120

Conread position: 353-501
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 124

Conread position: 354-487
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 129

Conread position: 354-523
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 42, 122

Conread position: 355-473
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 356-464
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 356-523
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 65

Conread position: 357-488
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 111

Conread position: 358-501
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 36

Conread position: 363-523
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 72

Conread position: 364-523
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 109

Conread position: 380-523
Cow position:
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 93

Conread position: 391-505
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 429-523
Cow position:
Alignm length: 96
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 42

Show alignments to all cow chromosomes.