Cow genome map
| Conread name: | rpigcb_9121.y1 |
| Conread position: | 270-522 |
| Cow position: | chr13:43761960-43762209 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 126, 48 |
| Conread position: | 332-523 |
| Cow position: | chr13:25926639-25926833 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 63, 140 |
| Conread position: | 335-523 |
| Cow position: | chr13:55162064-55162251 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 137 |
| Conread position: | 340-521 |
| Cow position: | chr13:17350212-17350391 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 55, 75 |
| Conread position: | 341-486 |
| Cow position: | chr13:28536459-28536318 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 98 |
| Conread position: | 341-505 |
| Cow position: | chr13:59461102-59461261 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 117 |
| Conread position: | 341-516 |
| Cow position: | chr13:8667477-8667652 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 54, 97 |
| Conread position: | 341-521 |
| Cow position: | chr13:20115106-20115291 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 341-522 |
| Cow position: | chr13:9142139-9142323 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 341-523 |
| Cow position: | chr13:8609689-8609509 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 54, 96 |
| Conread position: | 343-523 |
| Cow position: | chr13:3211409-3211591 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 52, 129 |
| Conread position: | 344-523 |
| Cow position: | chr13:34261092-34261270 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 149 |
| Conread position: | 345-472 |
| Cow position: | chr13:20795342-20795219 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 345-475 |
| Cow position: | chr13:37751204-37751074 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 345-478 |
| Cow position: | chr13:14796071-14796201 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 80 |
| Conread position: | 345-492 |
| Cow position: | chr13:13182060-13182204 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 345-496 |
| Cow position: | chr13:18615244-18615398 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 345-496 |
| Cow position: | chr13:27180903-27181055 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 345-498 |
| Cow position: | chr13:24215811-24215657 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 345-501 |
| Cow position: | chr13:6663890-6663734 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 345-520 |
| Cow position: | chr13:60509258-60509081 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-522 |
| Cow position: | chr13:25579328-25579149 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-522 |
| Cow position: | chr13:46111833-46112005 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 345-523 |
| Cow position: | chr13:6616897-6616712 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 132 |
| Conread position: | 345-523 |
| Cow position: | chr13:18999397-18999580 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-523 |
| Cow position: | chr13:42200481-42200659 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-523 |
| Cow position: | chr13:42672561-42672382 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 345-523 |
| Cow position: | chr13:52459618-52459442 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 92 |
| Conread position: | 346-447 |
| Cow position: | chr13:48126971-48127074 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-452 |
| Cow position: | chr13:25521052-25520944 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-455 |
| Cow position: | chr13:6975982-6975871 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-455 |
| Cow position: | chr13:16163445-16163556 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-458 |
| Cow position: | chr13:369259-369146 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 346-463 |
| Cow position: | chr13:11146920-11147039 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-464 |
| Cow position: | chr13:9124789-9124907 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-465 |
| Cow position: | chr13:13796948-13796827 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-465 |
| Cow position: | chr13:30148700-30148579 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-465 |
| Cow position: | chr13:50948968-50948852 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 346-466 |
| Cow position: | chr13:53865499-53865621 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-469 |
| Cow position: | chr13:54236675-54236791 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 346-475 |
| Cow position: | chr13:28439272-28439403 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 346-479 |
| Cow position: | chr13:45593784-45593914 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 346-486 |
| Cow position: | chr13:17813334-17813475 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-487 |
| Cow position: | chr13:36666411-36666269 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-487 |
| Cow position: | chr13:39398514-39398658 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 346-487 |
| Cow position: | chr13:50768462-50768601 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 346-494 |
| Cow position: | chr13:20519924-20520073 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-494 |
| Cow position: | chr13:28071736-28071885 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 346-495 |
| Cow position: | chr13:56958844-56958981 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 346-497 |
| Cow position: | chr13:7046733-7046885 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 346-497 |
| Cow position: | chr13:20231327-20231177 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 346-497 |
| Cow position: | chr13:24110343-24110495 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 126 |
| Conread position: | 346-497 |
| Cow position: | chr13:47676070-47675920 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 346-498 |
| Cow position: | chr13:6465824-6465674 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 346-498 |
| Cow position: | chr13:25547719-25547566 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 346-501 |
| Cow position: | chr13:42640249-42640401 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 116 |
| Conread position: | 346-501 |
| Cow position: | chr13:45352894-45353050 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-502 |
| Cow position: | chr13:37621494-37621341 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 346-505 |
| Cow position: | chr13:11096045-11096202 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 346-508 |
| Cow position: | chr13:32282991-32283152 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 346-516 |
| Cow position: | chr13:52894012-52894179 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 346-517 |
| Cow position: | chr13:20579775-20579943 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 151, 95 |
| Conread position: | 346-519 |
| Cow position: | chr13:585007-584835 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 346-519 |
| Cow position: | chr13:41157268-41157440 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 346-520 |
| Cow position: | chr13:12673425-12673257 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 346-520 |
| Cow position: | chr13:15041608-15041437 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 346-520 |
| Cow position: | chr13:52055729-52055555 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-521 |
| Cow position: | chr13:26369387-26369563 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 49, 71 |
| Conread position: | 346-521 |
| Cow position: | chr13:34873452-34873629 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 346-522 |
| Cow position: | chr13:18929392-18929567 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 346-522 |
| Cow position: | chr13:19188164-19188339 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-522 |
| Cow position: | chr13:20174604-20174787 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 134 |
| Conread position: | 346-522 |
| Cow position: | chr13:37593084-37592905 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 346-523 |
| Cow position: | chr13:5263418-5263245 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr13:9900022-9900188 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 346-523 |
| Cow position: | chr13:10925056-10924873 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 346-523 |
| Cow position: | chr13:11643802-11643981 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr13:12547045-12546871 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 346-523 |
| Cow position: | chr13:12876109-12875931 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 150, 50 |
| Conread position: | 346-523 |
| Cow position: | chr13:17837814-17837989 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 346-523 |
| Cow position: | chr13:19778990-19778809 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 132 |
| Conread position: | 346-523 |
| Cow position: | chr13:20137684-20137864 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 346-523 |
| Cow position: | chr13:21275722-21275897 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr13:21283841-21283662 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 85 |
| Conread position: | 346-523 |
| Cow position: | chr13:37503720-37503541 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 49, 71 |
| Conread position: | 346-523 |
| Cow position: | chr13:49823890-49824066 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 346-523 |
| Cow position: | chr13:52641085-52640910 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr13:56034996-56034819 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 346-523 |
| Cow position: | chr13:56148384-56148563 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 346-523 |
| Cow position: | chr13:56160583-56160404 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 132 |
| Conread position: | 346-523 |
| Cow position: | chr13:62007970-62008152 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 347-449 |
| Cow position: | chr13:8537686-8537790 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 347-456 |
| Cow position: | chr13:21246845-21246734 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 347-460 |
| Cow position: | chr13:10220825-10220940 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 347-463 |
| Cow position: | chr13:24098910-24099028 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 347-476 |
| Cow position: | chr13:4404395-4404526 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 347-491 |
| Cow position: | chr13:6442241-6442101 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 347-497 |
| Cow position: | chr13:46515924-46516076 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 15, 128 |
| Conread position: | 347-498 |
| Cow position: | chr13:2776152-2776304 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 347-501 |
| Cow position: | chr13:37069209-37069364 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 347-501 |
| Cow position: | chr13:48554230-48554386 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 347-512 |
| Cow position: | chr13:14576077-14576239 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 347-523 |
| Cow position: | chr13:17823086-17822911 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 48, 101 |
| Conread position: | 347-523 |
| Cow position: | chr13:49520959-49520782 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 16, 129 |
| Conread position: | 347-523 |
| Cow position: | chr13:52749606-52749438 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 348-478 |
| Cow position: | chr13:17464469-17464599 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 348-521 |
| Cow position: | chr13:8362878-8362710 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 348-523 |
| Cow position: | chr13:7076122-7076298 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 110 |
| Conread position: | 349-462 |
| Cow position: | chr13:17716648-17716533 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 349-523 |
| Cow position: | chr13:55727768-55727940 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 350-464 |
| Cow position: | chr13:6113659-6113541 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 350-464 |
| Cow position: | chr13:8637565-8637681 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 350-492 |
| Cow position: | chr13:44003569-44003709 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 350-498 |
| Cow position: | chr13:37985877-37985728 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 350-501 |
| Cow position: | chr13:22115545-22115712 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 137 |
| Conread position: | 350-523 |
| Cow position: | chr13:51901451-51901632 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 45, 125 |
| Conread position: | 351-466 |
| Cow position: | chr13:8393029-8392912 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 351-486 |
| Cow position: | chr13:10522805-10522937 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 351-493 |
| Cow position: | chr13:40722839-40722696 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 351-494 |
| Cow position: | chr13:53330140-53330290 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 127 |
| Conread position: | 351-501 |
| Cow position: | chr13:21981104-21980957 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 351-522 |
| Cow position: | chr13:15282066-15281901 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 351-523 |
| Cow position: | chr13:20288516-20288694 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 351-523 |
| Cow position: | chr13:24715109-24715283 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 351-523 |
| Cow position: | chr13:36771552-36771380 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 352-491 |
| Cow position: | chr13:21294944-21295086 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 352-523 |
| Cow position: | chr13:24230083-24230249 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 352-523 |
| Cow position: | chr13:37381670-37381841 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 353-501 |
| Cow position: | chr13:2773997-2774150 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 124 |
| Conread position: | 354-487 |
| Cow position: | chr13:28524446-28524311 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 129 |
| Conread position: | 354-523 |
| Cow position: | chr13:16020722-16020892 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 355-473 |
| Cow position: | chr13:9884406-9884526 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 356-464 |
| Cow position: | chr13:6608509-6608399 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 356-523 |
| Cow position: | chr13:37947078-37946910 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 357-488 |
| Cow position: | chr13:49356175-49356043 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 38, 111 |
| Conread position: | 358-501 |
| Cow position: | chr13:19117619-19117760 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 363-523 |
| Cow position: | chr13:43139334-43139174 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 364-523 |
| Cow position: | chr13:6061127-6060967 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 109 |
| Conread position: | 380-523 |
| Cow position: | chr13:8524721-8524576 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 93 |
| Conread position: | 391-505 |
| Cow position: | chr13:29831520-29831409 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 429-523 |
| Cow position: | chr13:4420290-4420384 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 42 |
Show alignments to all cow chromosomes.