Cow genome map

Conread name: rpigcb_9121.y1

Conread position: 278-521
Cow position: chr14:8006844-8006614 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 40

Conread position: 324-462
Cow position: chr14:36536414-36536270 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 341-468
Cow position: chr14:46431985-46432112 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 107

Conread position: 341-497
Cow position: chr14:34399883-34399726 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 131

Conread position: 341-505
Cow position: chr14:34449056-34448892 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 137
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 54, 131

Conread position: 341-507
Cow position: chr14:1708741-1708572 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 54, 131

Conread position: 341-523
Cow position: chr14:14316802-14316979 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 94

Conread position: 341-523
Cow position: chr14:15504241-15504057 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 99

Conread position: 341-523
Cow position: chr14:40230720-40230542 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 114

Conread position: 343-498
Cow position: chr14:33247512-33247356 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 52, 129

Conread position: 345-460
Cow position: chr14:27303577-27303694 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 345-464
Cow position: chr14:18412672-18412551 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 28

Conread position: 345-464
Cow position: chr14:45167207-45167086 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 345-479
Cow position: chr14:20245250-20245114 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 345-488
Cow position: chr14:4109571-4109429 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 81

Conread position: 345-496
Cow position: chr14:4227303-4227150 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 131
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 0

Conread position: 345-497
Cow position: chr14:27999117-27998964 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 114

Conread position: 345-510
Cow position: chr14:10693335-10693173 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 80

Conread position: 345-516
Cow position: chr14:31130456-31130289 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 112

Conread position: 345-519
Cow position: chr14:23419715-23419890 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 131

Conread position: 345-523
Cow position: chr14:7198417-7198599 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 50, 129

Conread position: 345-523
Cow position: chr14:11470228-11470052 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 28

Conread position: 345-523
Cow position: chr14:32452166-32452349 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 93

Conread position: 345-523
Cow position: chr14:44713338-44713513 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 127

Conread position: 345-523
Cow position: chr14:49487880-49488058 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 78

Conread position: 346-460
Cow position: chr14:24785578-24785694 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 27

Conread position: 346-461
Cow position: chr14:35651863-35651748 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 346-464
Cow position: chr14:37436790-37436670 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 346-465
Cow position: chr14:26456293-26456414 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 346-470
Cow position: chr14:30023277-30023151 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 346-471
Cow position: chr14:4209426-4209553 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 346-471
Cow position: chr14:5668198-5668072 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 112

Conread position: 346-478
Cow position: chr14:27364500-27364631 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 81

Conread position: 346-491
Cow position: chr14:18941365-18941220 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 121

Conread position: 346-492
Cow position: chr14:20234273-20234126 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 122

Conread position: 346-494
Cow position: chr14:30431648-30431499 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 128

Conread position: 346-496
Cow position: chr14:27733527-27733673 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 42

Conread position: 346-497
Cow position: chr14:12520382-12520230 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 50, 126

Conread position: 346-498
Cow position: chr14:10691708-10691553 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 346-498
Cow position: chr14:15428398-15428551 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 126

Conread position: 346-498
Cow position: chr14:16310421-16310575 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 17, 127

Conread position: 346-499
Cow position: chr14:22916370-22916217 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 123

Conread position: 346-502
Cow position: chr14:20466857-20467007 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 82

Conread position: 346-510
Cow position: chr14:28924088-28924251 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 49, 126

Conread position: 346-511
Cow position: chr14:15055071-15054905 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 27

Conread position: 346-516
Cow position: chr14:7036437-7036265 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 124

Conread position: 346-520
Cow position: chr14:34331406-34331231 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 127

Conread position: 346-520
Cow position: chr14:34775826-34775654 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 126

Conread position: 346-521
Cow position: chr14:12035331-12035502 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 14

Conread position: 346-521
Cow position: chr14:24981379-24981549 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 84

Conread position: 346-521
Cow position: chr14:26655214-26655039 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 126

Conread position: 346-521
Cow position: chr14:37883996-37883819 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 50, 127

Conread position: 346-522
Cow position: chr14:19951486-19951665 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 128

Conread position: 346-522
Cow position: chr14:20712767-20712594 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 52, 63

Conread position: 346-523
Cow position: chr14:2975163-2974994 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 8

Conread position: 346-523
Cow position: chr14:3943630-3943456 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position: chr14:19129426-19129606 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position: chr14:19394281-19394456 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 65

Conread position: 346-523
Cow position: chr14:19594216-19594033 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 9

Conread position: 346-523
Cow position: chr14:28378279-28378457 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position: chr14:29964940-29965114 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 125

Conread position: 346-523
Cow position: chr14:35381512-35381687 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 49, 44

Conread position: 346-523
Cow position: chr14:35503280-35503461 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 49, 133

Conread position: 346-523
Cow position: chr14:38144187-38144012 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position: chr14:42419353-42419177 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 122

Conread position: 346-523
Cow position: chr14:42436945-42437122 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 49, 107

Conread position: 347-470
Cow position: chr14:18270282-18270406 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 107
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 48, 116

Conread position: 347-496
Cow position: chr14:39618455-39618305 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 48, 125

Conread position: 347-511
Cow position: chr14:45045520-45045687 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 54, 47

Conread position: 347-521
Cow position: chr14:11285501-11285671 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 92

Conread position: 347-523
Cow position: chr14:12244464-12244285 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 126

Conread position: 348-495
Cow position: chr14:27823354-27823502 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 123

Conread position: 348-523
Cow position: chr14:33457120-33456944 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 47, 13

Conread position: 348-523
Cow position: chr14:50362716-50362892 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 46, 124

Conread position: 349-461
Cow position: chr14:4491359-4491473 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 350-478
Cow position: chr14:21406786-21406657 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 122

Conread position: 350-493
Cow position: chr14:45718339-45718197 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 51

Conread position: 350-496
Cow position: chr14:36425483-36425340 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 108

Conread position: 350-521
Cow position: chr14:40754323-40754150 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 122

Conread position: 350-523
Cow position: chr14:45052367-45052537 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 118

Conread position: 351-461
Cow position: chr14:50519254-50519142 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 351-463
Cow position: chr14:7316719-7316833 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 351-492
Cow position: chr14:39037151-39037288 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 351-516
Cow position: chr14:36443093-36442927 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 44, 121

Conread position: 351-523
Cow position: chr14:4282581-4282411 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 44, 82

Conread position: 351-523
Cow position: chr14:35420839-35420666 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 121

Conread position: 352-462
Cow position: chr14:30260694-30260805 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 107

Conread position: 352-489
Cow position: chr14:33328885-33329025 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 352-497
Cow position: chr14:20481914-20481771 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 21

Conread position: 352-522
Cow position: chr14:14187257-14187428 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 87

Conread position: 352-522
Cow position: chr14:22941802-22941626 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 120

Conread position: 352-523
Cow position: chr14:17238287-17238450 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 352-523
Cow position: chr14:27044846-27044676 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 120

Conread position: 353-523
Cow position: chr14:18763506-18763347 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 354-522
Cow position: chr14:16340925-16341089 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 355-475
Cow position: chr14:7127787-7127908 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 117

Conread position: 355-523
Cow position: chr14:28115257-28115089 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 26

Conread position: 357-523
Cow position: chr14:35018822-35018654 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 116

Conread position: 358-523
Cow position: chr14:48412950-48412783 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 115

Conread position: 361-522
Cow position: chr14:18904671-18904514 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 67

Conread position: 367-523
Cow position: chr14:24236765-24236924 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 107

Conread position: 376-523
Cow position: chr14:41180764-41180612 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 99

Show alignments to all cow chromosomes.