Cow genome map
| Conread name: | rpigcb_9121.y1 |
| Conread position: | 275-522 |
| Cow position: | chr16:48546022-48545767 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 75, 21 |
| Conread position: | 276-516 |
| Cow position: | chr16:46452553-46452793 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 295-521 |
| Cow position: | chr16:10773295-10773080 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 55 |
| Conread position: | 307-488 |
| Cow position: | chr16:14338707-14338525 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 42, 89 |
| Conread position: | 325-498 |
| Cow position: | chr16:30358920-30359093 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 341-460 |
| Cow position: | chr16:8469805-8469684 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 341-461 |
| Cow position: | chr16:15203241-15203363 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 341-515 |
| Cow position: | chr16:22323683-22323863 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 341-523 |
| Cow position: | chr16:4192306-4192479 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 54, 100 |
| Conread position: | 341-523 |
| Cow position: | chr16:9497139-9497321 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 54, 132 |
| Conread position: | 341-523 |
| Cow position: | chr16:32301878-32302059 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 54, 132 |
| Conread position: | 343-523 |
| Cow position: | chr16:35623124-35623297 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 344-523 |
| Cow position: | chr16:46548144-46548331 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 128 |
| Conread position: | 345-463 |
| Cow position: | chr16:22776298-22776418 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 345-479 |
| Cow position: | chr16:13996072-13996206 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 50, 123 |
| Conread position: | 345-485 |
| Cow position: | chr16:50286636-50286496 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 345-495 |
| Cow position: | chr16:4736463-4736611 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 345-495 |
| Cow position: | chr16:18243858-18243715 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 51 |
| Conread position: | 345-496 |
| Cow position: | chr16:7812814-7812663 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-497 |
| Cow position: | chr16:9560371-9560524 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-520 |
| Cow position: | chr16:48086746-48086921 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 49 |
| Conread position: | 345-522 |
| Cow position: | chr16:10039723-10039898 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 345-522 |
| Cow position: | chr16:18206082-18205907 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 345-523 |
| Cow position: | chr16:4910401-4910581 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 123 |
| Conread position: | 345-523 |
| Cow position: | chr16:8065764-8065941 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 345-523 |
| Cow position: | chr16:12274192-12274014 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 345-523 |
| Cow position: | chr16:26676562-26676741 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-523 |
| Cow position: | chr16:29677510-29677686 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-523 |
| Cow position: | chr16:49336347-49336174 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 80 |
| Conread position: | 346-449 |
| Cow position: | chr16:9950816-9950919 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 346-449 |
| Cow position: | chr16:27032699-27032594 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-450 |
| Cow position: | chr16:25419131-25419237 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-455 |
| Cow position: | chr16:4102708-4102819 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-455 |
| Cow position: | chr16:7611986-7611875 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 346-463 |
| Cow position: | chr16:10011730-10011845 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 346-464 |
| Cow position: | chr16:28199151-28199032 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 346-466 |
| Cow position: | chr16:43758523-43758645 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-469 |
| Cow position: | chr16:7928262-7928387 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-469 |
| Cow position: | chr16:15714232-15714107 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 346-469 |
| Cow position: | chr16:43866726-43866856 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 346-472 |
| Cow position: | chr16:27051168-27051040 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-474 |
| Cow position: | chr16:16945174-16945305 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 110 |
| Conread position: | 346-478 |
| Cow position: | chr16:12220804-12220671 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-485 |
| Cow position: | chr16:35074685-35074545 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-487 |
| Cow position: | chr16:9596493-9596351 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-487 |
| Cow position: | chr16:14046408-14046542 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 346-488 |
| Cow position: | chr16:35297524-35297386 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 117, 41 |
| Conread position: | 346-492 |
| Cow position: | chr16:6232379-6232230 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 346-492 |
| Cow position: | chr16:22329284-22329137 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-493 |
| Cow position: | chr16:1415180-1415323 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 89 |
| Conread position: | 346-495 |
| Cow position: | chr16:12097764-12097615 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 128 |
| Conread position: | 346-495 |
| Cow position: | chr16:12939743-12939591 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 346-495 |
| Cow position: | chr16:15254634-15254780 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 346-496 |
| Cow position: | chr16:29159243-29159097 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 84 |
| Conread position: | 346-496 |
| Cow position: | chr16:53629295-53629146 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 346-497 |
| Cow position: | chr16:34998502-34998650 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 346-497 |
| Cow position: | chr16:49860358-49860203 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 346-498 |
| Cow position: | chr16:14568365-14568519 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 120 |
| Conread position: | 346-498 |
| Cow position: | chr16:33530532-33530379 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-501 |
| Cow position: | chr16:56595267-56595421 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 104 |
| Conread position: | 346-502 |
| Cow position: | chr16:31241172-31241324 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 346-502 |
| Cow position: | chr16:42633621-42633776 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 112 |
| Conread position: | 346-502 |
| Cow position: | chr16:44138370-44138526 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 346-506 |
| Cow position: | chr16:258163-258316 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 346-515 |
| Cow position: | chr16:18048032-18048200 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 346-516 |
| Cow position: | chr16:8273715-8273885 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-516 |
| Cow position: | chr16:30662147-30662317 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 346-516 |
| Cow position: | chr16:34291167-34291340 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 346-520 |
| Cow position: | chr16:7665760-7665585 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-520 |
| Cow position: | chr16:25154620-25154799 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 346-520 |
| Cow position: | chr16:51697208-51697026 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 43, 128 |
| Conread position: | 346-522 |
| Cow position: | chr16:7441980-7442153 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 346-522 |
| Cow position: | chr16:22984876-22984704 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 346-522 |
| Cow position: | chr16:49169258-49169438 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 149 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-522 |
| Cow position: | chr16:54664676-54664854 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 346-523 |
| Cow position: | chr16:1548755-1548929 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr16:2223274-2223456 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr16:7550089-7549912 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 346-523 |
| Cow position: | chr16:8522267-8522447 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 346-523 |
| Cow position: | chr16:9830567-9830392 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 125 |
| Conread position: | 346-523 |
| Cow position: | chr16:13698638-13698458 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr16:14754200-14754377 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 130 |
| Conread position: | 346-523 |
| Cow position: | chr16:15960167-15960346 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr16:17135847-17135673 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 346-523 |
| Cow position: | chr16:17745959-17745779 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 346-523 |
| Cow position: | chr16:18052455-18052276 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 346-523 |
| Cow position: | chr16:20205584-20205403 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 346-523 |
| Cow position: | chr16:28444367-28444543 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr16:28833966-28833782 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr16:29712542-29712367 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 48, 127 |
| Conread position: | 346-523 |
| Cow position: | chr16:33405371-33405550 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 346-523 |
| Cow position: | chr16:34153448-34153622 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 346-523 |
| Cow position: | chr16:37452491-37452670 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 346-523 |
| Cow position: | chr16:38663588-38663764 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 346-523 |
| Cow position: | chr16:43308440-43308616 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 346-523 |
| Cow position: | chr16:45785860-45785680 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr16:51112757-51112931 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 112 |
| Conread position: | 346-523 |
| Cow position: | chr16:55683421-55683247 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 346-523 |
| Cow position: | chr16:56082242-56082417 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr16:56796543-56796720 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 347-472 |
| Cow position: | chr16:34412930-34412804 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 347-495 |
| Cow position: | chr16:15407437-15407584 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 87 |
| Conread position: | 347-501 |
| Cow position: | chr16:50409367-50409211 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 46 |
| Conread position: | 347-504 |
| Cow position: | chr16:15023509-15023667 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 46, 127 |
| Conread position: | 347-509 |
| Cow position: | chr16:20648034-20647880 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 347-522 |
| Cow position: | chr16:6213716-6213538 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 347-522 |
| Cow position: | chr16:10366046-10365865 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 347-523 |
| Cow position: | chr16:8933306-8933478 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 347-523 |
| Cow position: | chr16:12501039-12501215 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 347-523 |
| Cow position: | chr16:22773102-22772923 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 7, 126 |
| Conread position: | 348-472 |
| Cow position: | chr16:23811241-23811119 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 348-521 |
| Cow position: | chr16:30186763-30186591 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 348-523 |
| Cow position: | chr16:15370807-15370628 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 47, 124 |
| Conread position: | 349-494 |
| Cow position: | chr16:16232176-16232027 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 125 |
| Conread position: | 349-520 |
| Cow position: | chr16:12523176-12523004 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 350-450 |
| Cow position: | chr16:9097142-9097040 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 350-495 |
| Cow position: | chr16:56265619-56265475 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 96 |
| Conread position: | 350-496 |
| Cow position: | chr16:30027992-30027845 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 137 |
| Conread position: | 350-522 |
| Cow position: | chr16:3246086-3246260 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 350-523 |
| Cow position: | chr16:48145284-48145457 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 108 |
| Conread position: | 351-467 |
| Cow position: | chr16:38355311-38355427 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 351-487 |
| Cow position: | chr16:48448841-48448704 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 121 |
| Conread position: | 351-495 |
| Cow position: | chr16:8025737-8025882 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 351-501 |
| Cow position: | chr16:9578374-9578523 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 351-504 |
| Cow position: | chr16:29655443-29655286 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 351-520 |
| Cow position: | chr16:53086223-53086388 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 351-521 |
| Cow position: | chr16:54226482-54226651 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 351-522 |
| Cow position: | chr16:7619067-7619231 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 351-523 |
| Cow position: | chr16:589598-589764 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 73 |
| Conread position: | 351-523 |
| Cow position: | chr16:6319321-6319146 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 351-523 |
| Cow position: | chr16:8018086-8017913 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 351-523 |
| Cow position: | chr16:13578743-13578916 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 351-523 |
| Cow position: | chr16:42340314-42340141 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 47, 122 |
| Conread position: | 351-523 |
| Cow position: | chr16:44429001-44428825 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 352-476 |
| Cow position: | chr16:9280000-9280126 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 352-516 |
| Cow position: | chr16:45457079-45456908 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 352-516 |
| Cow position: | chr16:56670802-56670969 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 352-523 |
| Cow position: | chr16:11008451-11008289 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 146, 31 |
| Conread position: | 352-523 |
| Cow position: | chr16:42201019-42200844 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 352-523 |
| Cow position: | chr16:42539472-42539644 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 353-450 |
| Cow position: | chr16:44568997-44568898 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 353-497 |
| Cow position: | chr16:41530184-41530329 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 353-514 |
| Cow position: | chr16:53508869-53509028 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 353-520 |
| Cow position: | chr16:8441692-8441857 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 353-522 |
| Cow position: | chr16:43674990-43674821 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 353-523 |
| Cow position: | chr16:39165355-39165187 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 110 |
| Conread position: | 354-516 |
| Cow position: | chr16:28395966-28396131 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 355-458 |
| Cow position: | chr16:44144502-44144397 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 355-471 |
| Cow position: | chr16:52705962-52706079 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 107 |
| Conread position: | 355-510 |
| Cow position: | chr16:45299814-45299968 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 40, 111 |
| Conread position: | 355-520 |
| Cow position: | chr16:36286570-36286733 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 91 |
| Conread position: | 355-522 |
| Cow position: | chr16:23564246-23564084 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 102 |
| Conread position: | 355-523 |
| Cow position: | chr16:23955718-23955885 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 356-487 |
| Cow position: | chr16:7496368-7496238 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 358-496 |
| Cow position: | chr16:45702861-45702998 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 114 |
| Conread position: | 358-522 |
| Cow position: | chr16:27160753-27160919 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 358-523 |
| Cow position: | chr16:10148393-10148226 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 366-523 |
| Cow position: | chr16:52889308-52889465 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 383-523 |
| Cow position: | chr16:39646630-39646490 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 89 |
Show alignments to all cow chromosomes.