Cow genome map

Conread name: rpigcb_9121.y1

Conread position: 277-522
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 19

Conread position: 311-523
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 35

Conread position: 330-516
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 50

Conread position: 335-501
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 137

Conread position: 340-488
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 136

Conread position: 340-493
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 95

Conread position: 340-502
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 11

Conread position: 341-479
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 133

Conread position: 341-487
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 12

Conread position: 341-488
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 54, 131

Conread position: 341-501
Cow position:
Alignm length: 163
Alignm identity: 132
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 131

Conread position: 341-522
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 131

Conread position: 341-523
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 141

Conread position: 341-523
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 127

Conread position: 341-523
Cow position:
Alignm length: 187
Alignm identity: 149
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 53, 131

Conread position: 343-467
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 345-460
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 345-467
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 79

Conread position: 345-484
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 127

Conread position: 345-487
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 127

Conread position: 345-487
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 127

Conread position: 345-495
Cow position:
Alignm length: 153
Alignm identity: 124
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 127

Conread position: 345-495
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 127

Conread position: 345-497
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 127

Conread position: 345-497
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 127

Conread position: 345-505
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 127

Conread position: 345-519
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 27

Conread position: 345-520
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 27

Conread position: 345-521
Cow position:
Alignm length: 180
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 28

Conread position: 345-522
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 121, 0

Conread position: 345-523
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 90

Conread position: 345-523
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 17

Conread position: 345-523
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 49, 129

Conread position: 345-523
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 113

Conread position: 345-523
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 51, 122

Conread position: 345-523
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 133

Conread position: 345-523
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 67

Conread position: 345-523
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 67

Conread position: 346-448
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 346-460
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 346-464
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 346-465
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 75

Conread position: 346-465
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 107

Conread position: 346-467
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 346-470
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 346-472
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 84

Conread position: 346-472
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 346-482
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 346-487
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 69

Conread position: 346-491
Cow position:
Alignm length: 148
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 103

Conread position: 346-495
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 126

Conread position: 346-496
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 121

Conread position: 346-496
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 126

Conread position: 346-496
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 17, 84

Conread position: 346-496
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 14, 121

Conread position: 346-497
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 55

Conread position: 346-501
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 126

Conread position: 346-501
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 126

Conread position: 346-501
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 27

Conread position: 346-505
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 49, 126

Conread position: 346-508
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 55

Conread position: 346-515
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 49, 126

Conread position: 346-519
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 126

Conread position: 346-520
Cow position:
Alignm length: 178
Alignm identity: 142
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 86

Conread position: 346-521
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 14

Conread position: 346-522
Cow position:
Alignm length: 181
Alignm identity: 147
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 73

Conread position: 346-522
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 26

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 140
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position:
Alignm length: 182
Alignm identity: 148
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 47, 128

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 122

Conread position: 346-523
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 133

Conread position: 346-523
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 129

Conread position: 346-523
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 49, 124

Conread position: 346-523
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 346-523
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 14

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 94

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 76

Conread position: 346-523
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 27

Conread position: 346-523
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 9

Conread position: 346-523
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 148
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 128

Conread position: 346-523
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 110

Conread position: 346-523
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 127

Conread position: 347-460
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 347-476
Cow position:
Alignm length: 132
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 68

Conread position: 347-486
Cow position:
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 88

Conread position: 347-508
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 48, 43

Conread position: 347-523
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 48, 127

Conread position: 348-455
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 348-494
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 124

Conread position: 348-495
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 106

Conread position: 349-521
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 12

Conread position: 350-501
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 128

Conread position: 350-509
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 124

Conread position: 350-511
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 10

Conread position: 350-521
Cow position:
Alignm length: 175
Alignm identity: 137
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 124

Conread position: 350-522
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 122

Conread position: 350-523
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 45, 126

Conread position: 350-523
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 121

Conread position: 350-523
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 121

Conread position: 351-486
Cow position:
Alignm length: 138
Alignm identity: 113
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 121

Conread position: 351-496
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 117

Conread position: 351-501
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 65

Conread position: 351-509
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 75

Conread position: 351-521
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 39

Conread position: 351-522
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 150

Conread position: 351-523
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 26

Conread position: 351-523
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 21

Conread position: 351-523
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 121

Conread position: 352-497
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 115

Conread position: 352-501
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 119

Conread position: 352-505
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 120

Conread position: 352-516
Cow position:
Alignm length: 169
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 78

Conread position: 352-521
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 147, 44

Conread position: 352-523
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 116

Conread position: 353-464
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 42, 93

Conread position: 353-509
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 81

Conread position: 353-523
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 119

Conread position: 353-523
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 77

Conread position: 354-464
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 354-493
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 119

Conread position: 354-523
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 118

Conread position: 355-487
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 118

Conread position: 356-523
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 121

Conread position: 357-521
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 115

Conread position: 357-522
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 95

Show alignments to all cow chromosomes.