Cow genome map
| Conread name: | rpigcb_9121.y1 |
| Conread position: | 341-479 |
| Cow position: | chr24:15263979-15263839 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 134 |
| Conread position: | 341-483 |
| Cow position: | chr24:11836301-11836444 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 341-491 |
| Cow position: | chr24:19187040-19186894 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 54, 100 |
| Conread position: | 341-497 |
| Cow position: | chr24:41980558-41980713 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 341-506 |
| Cow position: | chr24:6742324-6742158 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 341-508 |
| Cow position: | chr24:16994984-16994819 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 113 |
| Conread position: | 341-523 |
| Cow position: | chr24:21606576-21606750 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 74 |
| Conread position: | 341-523 |
| Cow position: | chr24:27040150-27039968 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 83 |
| Conread position: | 345-479 |
| Cow position: | chr24:17309039-17309173 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 345-484 |
| Cow position: | chr24:41412198-41412335 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 111 |
| Conread position: | 345-497 |
| Cow position: | chr24:40404713-40404862 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 79 |
| Conread position: | 345-521 |
| Cow position: | chr24:19800941-19800769 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 345-521 |
| Cow position: | chr24:28721983-28721814 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 345-522 |
| Cow position: | chr24:42862721-42862545 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 345-523 |
| Cow position: | chr24:34742852-34742673 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 50, 128 |
| Conread position: | 346-458 |
| Cow position: | chr24:7113320-7113206 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-460 |
| Cow position: | chr24:22235565-22235449 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 346-462 |
| Cow position: | chr24:162101-161983 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-464 |
| Cow position: | chr24:16641008-16640887 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-467 |
| Cow position: | chr24:27066326-27066205 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 346-469 |
| Cow position: | chr24:18874725-18874848 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 346-469 |
| Cow position: | chr24:21623320-21623198 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 346-480 |
| Cow position: | chr24:32890946-32891081 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-494 |
| Cow position: | chr24:28470582-28470731 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 126 |
| Conread position: | 346-495 |
| Cow position: | chr24:20801250-20801398 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 346-498 |
| Cow position: | chr24:18750805-18750649 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-504 |
| Cow position: | chr24:21519525-21519367 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 346-510 |
| Cow position: | chr24:18313835-18314006 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 135 |
| Conread position: | 346-512 |
| Cow position: | chr24:13626382-13626214 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 346-520 |
| Cow position: | chr24:23556236-23556415 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 132 |
| Conread position: | 346-521 |
| Cow position: | chr24:44987277-44987455 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 346-522 |
| Cow position: | chr24:17955347-17955519 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 346-522 |
| Cow position: | chr24:34008475-34008654 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr24:18331818-18331643 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 346-523 |
| Cow position: | chr24:18741474-18741649 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 346-523 |
| Cow position: | chr24:19535158-19535333 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr24:22079558-22079383 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 346-523 |
| Cow position: | chr24:30483843-30484029 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 133 |
| Conread position: | 346-523 |
| Cow position: | chr24:31159713-31159542 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 89 |
| Conread position: | 347-463 |
| Cow position: | chr24:31383212-31383099 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 347-465 |
| Cow position: | chr24:6008076-6008194 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 347-479 |
| Cow position: | chr24:5143862-5143996 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 347-494 |
| Cow position: | chr24:43219982-43220123 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 347-521 |
| Cow position: | chr24:39910937-39911114 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 348-472 |
| Cow position: | chr24:5152619-5152493 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 348-523 |
| Cow position: | chr24:10300172-10300002 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 350-496 |
| Cow position: | chr24:390197-390051 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 350-499 |
| Cow position: | chr24:22647248-22647399 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 350-502 |
| Cow position: | chr24:7390243-7390391 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 350-520 |
| Cow position: | chr24:19637683-19637508 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 128 |
| Conread position: | 350-523 |
| Cow position: | chr24:27418010-27418180 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 351-475 |
| Cow position: | chr24:256119-255996 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 44, 109 |
| Conread position: | 351-494 |
| Cow position: | chr24:20969572-20969714 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 351-522 |
| Cow position: | chr24:18615093-18614921 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 120 |
| Conread position: | 351-522 |
| Cow position: | chr24:39523356-39523525 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 351-523 |
| Cow position: | chr24:6102920-6102746 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 351-523 |
| Cow position: | chr24:16268036-16268207 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 351-523 |
| Cow position: | chr24:16510070-16509892 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 151 |
| Conread position: | 351-523 |
| Cow position: | chr24:17104477-17104651 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 121 |
| Conread position: | 351-523 |
| Cow position: | chr24:40130222-40130048 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 352-496 |
| Cow position: | chr24:20225828-20225687 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 352-510 |
| Cow position: | chr24:34272902-34272742 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 117 |
| Conread position: | 353-498 |
| Cow position: | chr24:34896610-34896753 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 354-520 |
| Cow position: | chr24:16895348-16895514 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 355-516 |
| Cow position: | chr24:5651910-5652067 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 356-521 |
| Cow position: | chr24:29673609-29673443 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 361-523 |
| Cow position: | chr24:29782244-29782085 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 363-500 |
| Cow position: | chr24:34556115-34555979 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 428-522 |
| Cow position: | chr24:7917347-7917440 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.