Cow genome map
| Conread name: | rpigcb_9121.y1 |
| Conread position: | 318-485 |
| Cow position: | chr26:32403328-32403160 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 341-523 |
| Cow position: | chr26:16550132-16549947 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 341-523 |
| Cow position: | chr26:32830224-32830045 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 55, 125 |
| Conread position: | 342-472 |
| Cow position: | chr26:35397262-35397130 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 345-475 |
| Cow position: | chr26:3071838-3071966 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 345-476 |
| Cow position: | chr26:5407119-5406987 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-479 |
| Cow position: | chr26:9501848-9501714 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 95 |
| Conread position: | 345-509 |
| Cow position: | chr26:6714162-6714324 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 43, 112 |
| Conread position: | 345-509 |
| Cow position: | chr26:20769991-20769827 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-523 |
| Cow position: | chr26:8811267-8811092 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-523 |
| Cow position: | chr26:31903306-31903128 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 346-461 |
| Cow position: | chr26:17423261-17423377 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 346-466 |
| Cow position: | chr26:28202620-28202742 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-468 |
| Cow position: | chr26:21822906-21823031 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-469 |
| Cow position: | chr26:28446722-28446597 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-471 |
| Cow position: | chr26:6823297-6823171 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 346-486 |
| Cow position: | chr26:19146039-19145900 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 90 |
| Conread position: | 346-488 |
| Cow position: | chr26:9839410-9839547 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 346-492 |
| Cow position: | chr26:16435517-16435664 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 126 |
| Conread position: | 346-494 |
| Cow position: | chr26:14951004-14951152 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-495 |
| Cow position: | chr26:29664018-29664170 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 128 |
| Conread position: | 346-498 |
| Cow position: | chr26:11672436-11672283 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-499 |
| Cow position: | chr26:8478733-8478886 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 346-516 |
| Cow position: | chr26:25526388-25526216 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-520 |
| Cow position: | chr26:22348873-22349048 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 346-521 |
| Cow position: | chr26:9104143-9104317 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 346-521 |
| Cow position: | chr26:30254495-30254665 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 346-523 |
| Cow position: | chr26:4807693-4807524 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 89 |
| Conread position: | 346-523 |
| Cow position: | chr26:4854683-4854501 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 125 |
| Conread position: | 346-523 |
| Cow position: | chr26:12893289-12893463 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 346-523 |
| Cow position: | chr26:19774161-19774339 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 346-523 |
| Cow position: | chr26:32776373-32776545 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 346-523 |
| Cow position: | chr26:33253177-33253357 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr26:33475835-33475651 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 49, 131 |
| Conread position: | 346-523 |
| Cow position: | chr26:35449202-35449022 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 347-468 |
| Cow position: | chr26:34114400-34114277 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 347-520 |
| Cow position: | chr26:6794288-6794112 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 132 |
| Conread position: | 347-521 |
| Cow position: | chr26:829943-829767 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 348-475 |
| Cow position: | chr26:13100219-13100347 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 348-494 |
| Cow position: | chr26:7157468-7157616 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 125 |
| Conread position: | 350-474 |
| Cow position: | chr26:7183862-7183988 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 351-487 |
| Cow position: | chr26:28374309-28374446 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 351-488 |
| Cow position: | chr26:18381446-18381310 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 351-520 |
| Cow position: | chr26:17057813-17057646 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 351-520 |
| Cow position: | chr26:33011536-33011702 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 351-523 |
| Cow position: | chr26:3706925-3706757 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 50, 120 |
| Conread position: | 351-523 |
| Cow position: | chr26:8353103-8352924 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 22 |
| Conread position: | 351-523 |
| Cow position: | chr26:24453776-24453944 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 353-504 |
| Cow position: | chr26:30026356-30026209 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 353-522 |
| Cow position: | chr26:32836371-32836204 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 353-523 |
| Cow position: | chr26:25074849-25074680 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 355-492 |
| Cow position: | chr26:11884429-11884291 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 356-508 |
| Cow position: | chr26:7224212-7224366 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 358-505 |
| Cow position: | chr26:18876835-18876982 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 114 |
| Conread position: | 360-523 |
| Cow position: | chr26:15200391-15200553 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 361-522 |
| Cow position: | chr26:4371765-4371609 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 365-522 |
| Cow position: | chr26:30568543-30568694 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 383-521 |
| Cow position: | chr26:32670394-32670532 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 13, 48 |
Show alignments to all cow chromosomes.