Cow genome map
| Conread name: | rpigcb_9121.y1 |
| Conread position: | 275-463 |
| Cow position: | chr9:2951675-2951479 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 341-496 |
| Cow position: | chr9:22434026-22433871 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 54, 111 |
| Conread position: | 341-523 |
| Cow position: | chr9:26102637-26102807 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 343-523 |
| Cow position: | chr9:8834223-8834046 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 52, 108 |
| Conread position: | 344-523 |
| Cow position: | chr9:26435153-26434973 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 6, 77 |
| Conread position: | 344-523 |
| Cow position: | chr9:45171320-45171135 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 132 |
| Conread position: | 345-459 |
| Cow position: | chr9:20828812-20828924 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 345-468 |
| Cow position: | chr9:57117065-57116942 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 111 |
| Conread position: | 345-471 |
| Cow position: | chr9:9316361-9316488 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 345-485 |
| Cow position: | chr9:39148985-39149126 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 345-487 |
| Cow position: | chr9:41644844-41644700 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 345-496 |
| Cow position: | chr9:10010721-10010868 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 345-507 |
| Cow position: | chr9:45756270-45756433 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 345-508 |
| Cow position: | chr9:52130921-52131080 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 345-510 |
| Cow position: | chr9:41394741-41394576 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-512 |
| Cow position: | chr9:32348908-32348738 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 127 |
| Conread position: | 345-520 |
| Cow position: | chr9:60110156-60110332 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 345-522 |
| Cow position: | chr9:38624718-38624542 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 121 |
| Conread position: | 345-523 |
| Cow position: | chr9:15806017-15805837 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 345-523 |
| Cow position: | chr9:28378874-28379052 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 345-523 |
| Cow position: | chr9:33541961-33542140 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 345-523 |
| Cow position: | chr9:35105884-35105706 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 345-523 |
| Cow position: | chr9:52754943-52754773 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 346-455 |
| Cow position: | chr9:8645173-8645285 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-461 |
| Cow position: | chr9:28718619-28718736 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-461 |
| Cow position: | chr9:46344843-46344960 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-464 |
| Cow position: | chr9:1884223-1884103 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-465 |
| Cow position: | chr9:31344700-31344579 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 346-467 |
| Cow position: | chr9:50118065-50117944 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 54 |
| Conread position: | 346-472 |
| Cow position: | chr9:43680027-43680155 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 346-479 |
| Cow position: | chr9:53123996-53124130 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 346-481 |
| Cow position: | chr9:3847309-3847446 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-484 |
| Cow position: | chr9:34423528-34423668 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 346-487 |
| Cow position: | chr9:44822417-44822275 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-489 |
| Cow position: | chr9:21292501-21292356 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 346-495 |
| Cow position: | chr9:35049386-35049530 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 346-495 |
| Cow position: | chr9:46981320-46981168 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-497 |
| Cow position: | chr9:12786566-12786414 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-498 |
| Cow position: | chr9:31514025-31513879 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 346-500 |
| Cow position: | chr9:37677801-37677951 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 346-501 |
| Cow position: | chr9:55529707-55529858 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 346-502 |
| Cow position: | chr9:39315760-39315911 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 346-510 |
| Cow position: | chr9:18828147-18827982 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 346-516 |
| Cow position: | chr9:43342238-43342407 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 346-516 |
| Cow position: | chr9:50977346-50977165 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 346-519 |
| Cow position: | chr9:64050654-64050480 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-520 |
| Cow position: | chr9:1729767-1729589 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-520 |
| Cow position: | chr9:31359511-31359681 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 346-520 |
| Cow position: | chr9:42062005-42062184 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 346-520 |
| Cow position: | chr9:61997696-61997516 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 132 |
| Conread position: | 346-521 |
| Cow position: | chr9:5110766-5110942 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 346-521 |
| Cow position: | chr9:5650065-5649891 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 88 |
| Conread position: | 346-521 |
| Cow position: | chr9:9815320-9815497 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 346-521 |
| Cow position: | chr9:52598814-52598642 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 346-522 |
| Cow position: | chr9:6839901-6840084 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 346-522 |
| Cow position: | chr9:6954343-6954164 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 346-522 |
| Cow position: | chr9:17411286-17411109 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-522 |
| Cow position: | chr9:26403693-26403867 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 346-523 |
| Cow position: | chr9:6934166-6933990 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 346-523 |
| Cow position: | chr9:8998256-8998440 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 48, 128 |
| Conread position: | 346-523 |
| Cow position: | chr9:9311765-9311944 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr9:15215780-15215602 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr9:18425819-18426001 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 80 |
| Conread position: | 346-523 |
| Cow position: | chr9:20755849-20755672 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 346-523 |
| Cow position: | chr9:22443719-22443544 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 346-523 |
| Cow position: | chr9:27279216-27279392 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr9:32670040-32669864 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 128 |
| Conread position: | 346-523 |
| Cow position: | chr9:33237302-33237474 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 346-523 |
| Cow position: | chr9:38645437-38645259 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 346-523 |
| Cow position: | chr9:38941525-38941348 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr9:41282922-41283097 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 346-523 |
| Cow position: | chr9:44396569-44396742 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 116 |
| Conread position: | 346-523 |
| Cow position: | chr9:64064456-64064273 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 347-453 |
| Cow position: | chr9:34917276-34917168 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 347-459 |
| Cow position: | chr9:18003282-18003169 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 347-471 |
| Cow position: | chr9:63134303-63134425 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 347-478 |
| Cow position: | chr9:53413330-53413198 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 347-493 |
| Cow position: | chr9:14738157-14738304 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 125 |
| Conread position: | 347-494 |
| Cow position: | chr9:16811746-16811598 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 347-497 |
| Cow position: | chr9:33347582-33347431 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 126 |
| Conread position: | 347-498 |
| Cow position: | chr9:48118773-48118630 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 347-501 |
| Cow position: | chr9:14796862-14796708 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 133 |
| Conread position: | 347-503 |
| Cow position: | chr9:8992272-8992115 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 126 |
| Conread position: | 347-506 |
| Cow position: | chr9:32307323-32307165 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 347-515 |
| Cow position: | chr9:22152177-22152007 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 347-520 |
| Cow position: | chr9:51566587-51566412 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 347-522 |
| Cow position: | chr9:29185229-29185050 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 347-523 |
| Cow position: | chr9:3774073-3774244 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 347-523 |
| Cow position: | chr9:20901213-20901041 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 48 |
| Conread position: | 347-523 |
| Cow position: | chr9:28354425-28354604 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 348-512 |
| Cow position: | chr9:48017855-48017701 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 348-516 |
| Cow position: | chr9:22696132-22696298 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 348-523 |
| Cow position: | chr9:31638748-31638558 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 349-513 |
| Cow position: | chr9:19713990-19714155 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 350-479 |
| Cow position: | chr9:36457910-36458042 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 350-523 |
| Cow position: | chr9:1972859-1973025 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 350-523 |
| Cow position: | chr9:9443690-9443520 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 350-523 |
| Cow position: | chr9:11123572-11123399 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 350-523 |
| Cow position: | chr9:23788350-23788521 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 45, 103 |
| Conread position: | 351-474 |
| Cow position: | chr9:11427571-11427701 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 351-487 |
| Cow position: | chr9:54051689-54051823 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 351-493 |
| Cow position: | chr9:13846215-13846072 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 117 |
| Conread position: | 351-500 |
| Cow position: | chr9:41964822-41964673 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 351-516 |
| Cow position: | chr9:51720985-51720826 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 105 |
| Conread position: | 351-516 |
| Cow position: | chr9:52513536-52513370 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 351-519 |
| Cow position: | chr9:28686300-28686468 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 120 |
| Conread position: | 351-520 |
| Cow position: | chr9:17518577-17518408 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 21 |
| Conread position: | 351-520 |
| Cow position: | chr9:63745727-63745891 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 351-521 |
| Cow position: | chr9:43870887-43871060 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 351-522 |
| Cow position: | chr9:24652316-24652494 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 351-523 |
| Cow position: | chr9:3343661-3343832 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 47, 57 |
| Conread position: | 351-523 |
| Cow position: | chr9:8337939-8338112 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 351-523 |
| Cow position: | chr9:55084389-55084214 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 61 |
| Conread position: | 351-523 |
| Cow position: | chr9:62459279-62459452 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 351-523 |
| Cow position: | chr9:64559970-64559801 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 88 |
| Conread position: | 352-469 |
| Cow position: | chr9:7101358-7101474 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 352-501 |
| Cow position: | chr9:5219259-5219107 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 122 |
| Conread position: | 352-522 |
| Cow position: | chr9:823875-824045 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 352-522 |
| Cow position: | chr9:63153901-63153735 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 352-523 |
| Cow position: | chr9:4630017-4630188 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 83 |
| Conread position: | 352-523 |
| Cow position: | chr9:33696949-33697113 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 353-497 |
| Cow position: | chr9:58369082-58368938 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 353-498 |
| Cow position: | chr9:63785000-63784854 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 117 |
| Conread position: | 353-521 |
| Cow position: | chr9:1878088-1877926 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 353-523 |
| Cow position: | chr9:10650385-10650218 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 114 |
| Conread position: | 354-522 |
| Cow position: | chr9:8288533-8288700 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 354-522 |
| Cow position: | chr9:9358725-9358894 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 104 |
| Conread position: | 354-523 |
| Cow position: | chr9:39681254-39681423 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 355-479 |
| Cow position: | chr9:20637290-20637414 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 355-493 |
| Cow position: | chr9:50075980-50076116 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 356-509 |
| Cow position: | chr9:623272-623424 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 359-523 |
| Cow position: | chr9:15225376-15225215 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 361-478 |
| Cow position: | chr9:29792305-29792186 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 361-523 |
| Cow position: | chr9:5900039-5899878 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 363-521 |
| Cow position: | chr9:55532738-55532897 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 363-523 |
| Cow position: | chr9:59386845-59386685 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 365-522 |
| Cow position: | chr9:47500288-47500127 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 376-523 |
| Cow position: | chr9:8534753-8534605 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 97 |
Show alignments to all cow chromosomes.