Cow genome map

Conread name: rpigcb_9121.y1

Conread position: 275-484
Cow position: chrX:41164831-41164624 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 44

Conread position: 295-523
Cow position: chrX:47514429-47514663 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 28

Conread position: 341-463
Cow position: chrX:4092078-4091954 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 341-466
Cow position: chrX:1960271-1960398 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 341-474
Cow position: chrX:45950736-45950869 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 93

Conread position: 341-479
Cow position: chrX:753310-753167 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 135

Conread position: 341-515
Cow position: chrX:42836334-42836164 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 54, 19

Conread position: 341-521
Cow position: chrX:25037141-25036961 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 131

Conread position: 341-522
Cow position: chrX:23188630-23188804 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 94

Conread position: 341-523
Cow position: chrX:6278344-6278528 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 131

Conread position: 341-523
Cow position: chrX:33640129-33639945 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 54, 133

Conread position: 343-486
Cow position: chrX:25459577-25459726 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 93

Conread position: 345-464
Cow position: chrX:2314469-2314590 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 345-465
Cow position: chrX:31373686-31373564 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 345-465
Cow position: chrX:46909965-46909843 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 345-466
Cow position: chrX:11582371-11582248 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 113

Conread position: 345-488
Cow position: chrX:1719265-1719121 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 127

Conread position: 345-495
Cow position: chrX:34420884-34420733 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 123

Conread position: 345-497
Cow position: chrX:30672240-30672399 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 135

Conread position: 345-498
Cow position: chrX:23335826-23335976 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 85

Conread position: 345-500
Cow position: chrX:32330320-32330162 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 98

Conread position: 345-516
Cow position: chrX:6407693-6407523 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 76

Conread position: 345-516
Cow position: chrX:35885577-35885750 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 129

Conread position: 345-521
Cow position: chrX:6260000-6260174 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 10

Conread position: 345-522
Cow position: chrX:27261342-27261161 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 130

Conread position: 345-522
Cow position: chrX:36356255-36356086 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 73

Conread position: 345-522
Cow position: chrX:41027309-41027129 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 50, 127

Conread position: 345-522
Cow position: chrX:44339175-44339351 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 92

Conread position: 345-523
Cow position: chrX:8731243-8731059 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 90

Conread position: 345-523
Cow position: chrX:10516403-10516222 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 127

Conread position: 345-523
Cow position: chrX:36976101-36975922 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 112

Conread position: 345-523
Cow position: chrX:43116875-43116696 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 127

Conread position: 346-458
Cow position: chrX:27270525-27270410 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 346-460
Cow position: chrX:17498471-17498355 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 346-461
Cow position: chrX:48822194-48822310 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 9

Conread position: 346-463
Cow position: chrX:37749835-37749953 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 84

Conread position: 346-464
Cow position: chrX:34270710-34270592 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 108

Conread position: 346-465
Cow position: chrX:44995648-44995526 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 346-466
Cow position: chrX:11454330-11454213 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 346-467
Cow position: chrX:35681715-35681592 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 9

Conread position: 346-470
Cow position: chrX:16763776-16763904 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 346-479
Cow position: chrX:36313857-36313991 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 126

Conread position: 346-480
Cow position: chrX:41810019-41810154 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 126

Conread position: 346-483
Cow position: chrX:19356612-19356480 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 70

Conread position: 346-484
Cow position: chrX:19761903-19761764 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 126

Conread position: 346-488
Cow position: chrX:44054951-44054808 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 126

Conread position: 346-489
Cow position: chrX:35285322-35285178 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 49, 126

Conread position: 346-489
Cow position: chrX:38301958-38301814 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 126

Conread position: 346-491
Cow position: chrX:17524235-17524381 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 128

Conread position: 346-491
Cow position: chrX:28878025-28878171 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 49, 126

Conread position: 346-496
Cow position: chrX:40337059-40336909 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 88

Conread position: 346-497
Cow position: chrX:26205300-26205451 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 9

Conread position: 346-498
Cow position: chrX:33204822-33204973 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 14

Conread position: 346-500
Cow position: chrX:18204314-18204472 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 130

Conread position: 346-500
Cow position: chrX:27668809-27668963 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 126

Conread position: 346-500
Cow position: chrX:39180085-39180239 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 129
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 125

Conread position: 346-503
Cow position: chrX:7179043-7178889 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 49

Conread position: 346-504
Cow position: chrX:35276134-35275976 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 120

Conread position: 346-506
Cow position: chrX:11653919-11653750 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 49, 132

Conread position: 346-508
Cow position: chrX:3806830-3806670 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 9

Conread position: 346-508
Cow position: chrX:10831339-10831505 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 57, 129

Conread position: 346-508
Cow position: chrX:27175147-27174988 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 97

Conread position: 346-509
Cow position: chrX:32574466-32574300 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 126

Conread position: 346-512
Cow position: chrX:32910248-32910085 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 149, 50

Conread position: 346-516
Cow position: chrX:25412054-25411886 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 49, 27

Conread position: 346-516
Cow position: chrX:40680763-40680590 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 145
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 49, 126

Conread position: 346-516
Cow position: chrX:42873534-42873369 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 82

Conread position: 346-519
Cow position: chrX:38964257-38964082 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 145
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 49, 126

Conread position: 346-520
Cow position: chrX:20339745-20339916 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 49, 55

Conread position: 346-520
Cow position: chrX:27771819-27771988 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 72

Conread position: 346-520
Cow position: chrX:31489669-31489493 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 127

Conread position: 346-521
Cow position: chrX:30840695-30840513 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 133

Conread position: 346-521
Cow position: chrX:35269010-35268839 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 147
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 51, 89

Conread position: 346-521
Cow position: chrX:38728883-38728712 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 126

Conread position: 346-522
Cow position: chrX:32318455-32318276 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 127

Conread position: 346-522
Cow position: chrX:41878785-41878959 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 49, 84

Conread position: 346-522
Cow position: chrX:48558895-48558720 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position: chrX:4109333-4109162 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 127

Conread position: 346-523
Cow position: chrX:5872466-5872291 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 149
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 128

Conread position: 346-523
Cow position: chrX:6559308-6559473 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 346-523
Cow position: chrX:8797398-8797225 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 50, 94

Conread position: 346-523
Cow position: chrX:12290868-12290694 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 126

Conread position: 346-523
Cow position: chrX:16762922-16762741 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 15

Conread position: 346-523
Cow position: chrX:17888274-17888447 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 82

Conread position: 346-523
Cow position: chrX:23562781-23562605 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 126

Conread position: 346-523
Cow position: chrX:24331925-24331751 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position: chrX:25035233-25035407 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position: chrX:27393877-27394050 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position: chrX:31250537-31250359 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 127

Conread position: 346-523
Cow position: chrX:32821177-32821002 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 103

Conread position: 346-523
Cow position: chrX:33466772-33466582 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 15

Conread position: 346-523
Cow position: chrX:34554872-34554698 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 126

Conread position: 346-523
Cow position: chrX:36866321-36866143 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 44

Conread position: 346-523
Cow position: chrX:37129418-37129239 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 149
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 49, 128

Conread position: 346-523
Cow position: chrX:38549596-38549419 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 128

Conread position: 346-523
Cow position: chrX:40531894-40532072 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 126

Conread position: 346-523
Cow position: chrX:41941772-41941598 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 49, 128

Conread position: 346-523
Cow position: chrX:44702917-44703100 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 132

Conread position: 346-523
Cow position: chrX:46587971-46587792 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 146
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 49, 126

Conread position: 347-479
Cow position: chrX:35392150-35392279 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 83

Conread position: 347-479
Cow position: chrX:47342263-47342131 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 95

Conread position: 347-493
Cow position: chrX:37955995-37955848 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 125

Conread position: 347-496
Cow position: chrX:11656229-11656079 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 125

Conread position: 347-497
Cow position: chrX:29478871-29478721 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 127
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 88

Conread position: 347-512
Cow position: chrX:42449866-42450033 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 48, 125

Conread position: 347-523
Cow position: chrX:27705734-27705559 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 129

Conread position: 348-496
Cow position: chrX:16575259-16575110 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 124

Conread position: 348-502
Cow position: chrX:13924011-13923856 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 120

Conread position: 348-522
Cow position: chrX:27511575-27511402 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 124

Conread position: 349-503
Cow position: chrX:1175844-1175990 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 349-522
Cow position: chrX:44192298-44192476 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 46, 126

Conread position: 349-523
Cow position: chrX:45883825-45884002 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 120

Conread position: 350-498
Cow position: chrX:27446831-27446682 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 122

Conread position: 350-521
Cow position: chrX:21328058-21327880 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 125

Conread position: 350-523
Cow position: chrX:878235-878411 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 122

Conread position: 350-523
Cow position: chrX:4515836-4515656 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 129

Conread position: 350-523
Cow position: chrX:42247037-42247214 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 149
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 45, 122

Conread position: 350-523
Cow position: chrX:46433636-46433464 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 45, 122

Conread position: 351-461
Cow position: chrX:27667569-27667457 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 351-463
Cow position: chrX:2551236-2551121 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 351-487
Cow position: chrX:10076115-10075980 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 109

Conread position: 351-488
Cow position: chrX:1122403-1122537 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 84

Conread position: 351-489
Cow position: chrX:19018687-19018826 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 123

Conread position: 351-495
Cow position: chrX:9416540-9416684 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 116

Conread position: 351-496
Cow position: chrX:31829317-31829463 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 123

Conread position: 351-520
Cow position: chrX:161555-161386 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 21

Conread position: 351-522
Cow position: chrX:29601684-29601857 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 21

Conread position: 351-523
Cow position: chrX:5900606-5900441 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 84

Conread position: 351-523
Cow position: chrX:7351441-7351273 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 77

Conread position: 351-523
Cow position: chrX:22914898-22915065 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 145
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 45

Conread position: 351-523
Cow position: chrX:23498536-23498706 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 74

Conread position: 352-459
Cow position: chrX:5876250-5876141 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 352-469
Cow position: chrX:32877232-32877351 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 352-501
Cow position: chrX:42894069-42893917 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 352-512
Cow position: chrX:42432366-42432529 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 67

Conread position: 352-521
Cow position: chrX:31442686-31442857 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 44, 124

Conread position: 352-522
Cow position: chrX:22387107-22387269 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 83

Conread position: 352-522
Cow position: chrX:31626835-31627008 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 79

Conread position: 352-523
Cow position: chrX:41238212-41238381 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 21

Conread position: 352-523
Cow position: chrX:42855601-42855425 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 120

Conread position: 353-516
Cow position: chrX:17966483-17966322 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 114

Conread position: 353-522
Cow position: chrX:20743746-20743575 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 144
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 42, 117

Conread position: 353-522
Cow position: chrX:23513879-23514042 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 20

Conread position: 354-523
Cow position: chrX:10305210-10305376 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 70

Conread position: 355-491
Cow position: chrX:38968028-38967891 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 64

Conread position: 355-521
Cow position: chrX:34222854-34222688 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 46

Conread position: 355-523
Cow position: chrX:34503060-34502894 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 117

Conread position: 356-505
Cow position: chrX:15147058-15147204 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 68

Conread position: 356-523
Cow position: chrX:29680122-29680288 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 141
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 39, 116

Conread position: 357-461
Cow position: chrX:36722667-36722773 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 357-498
Cow position: chrX:16532334-16532193 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 94

Conread position: 359-522
Cow position: chrX:11082486-11082651 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 114

Conread position: 376-523
Cow position: chrX:11856549-11856400 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 97

Conread position: 402-523
Cow position: chrX:27680489-27680367 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 96, 69

Show alignments to all cow chromosomes.