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Cow genome map

           
Conread name:
           
rpigcf0_000672.y1
        

               
Conread position:
               
1-118
               

               
Cow position:
               
chr17:251562-251446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr17:4061530-4061389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
119, 137
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr17:20080455-20080598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr17:23038989-23038831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
121, 45
               

               
Conread position:
               
2-142
               

               
Cow position:
               
chr17:4083444-4083303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
3-117
               

               
Cow position:
               
chr17:43989926-43989812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-132
               

               
Cow position:
               
chr17:27793359-27793487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
3-141
               

               
Cow position:
               
chr17:24783586-24783447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
3-142
               

               
Cow position:
               
chr17:13967351-13967211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
3-142
               

               
Cow position:
               
chr17:39049639-39049499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:2263563-2263425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
117, 95
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:2581046-2580906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 137
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:6261283-6261145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
118, 43
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:9079996-9080136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 137
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:14215602-14215742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 82
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:14240929-14240789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 137
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:15437208-15437068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 137
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:15852117-15851977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 137
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:23323024-23323164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 137
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:29302180-29302041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
116, 83
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr17:40806231-40806093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
118, 85
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr17:3640484-3640616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 79
               

               
Conread position:
               
9-132
               

               
Cow position:
               
chr17:28027086-28027212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
200-413
               

               
Cow position:
               
chr17:5350176-5349960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
202-403
               

               
Cow position:
               
chr17:38263545-38263336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
203-401
               

               
Cow position:
               
chr17:28468079-28468274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
205-413
               

               
Cow position:
               
chr17:9911707-9911921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
208-412
               

               
Cow position:
               
chr17:949928-950135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
211-397
               

               
Cow position:
               
chr17:25718061-25718251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
211-406
               

               
Cow position:
               
chr17:23702584-23702782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
211-406
               

               
Cow position:
               
chr17:33275793-33275593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
211-412
               

               
Cow position:
               
chr17:9487260-9487456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
211-413
               

               
Cow position:
               
chr17:6936718-6936515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
211-413
               

               
Cow position:
               
chr17:15354893-15355095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr17:923836-924003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
212-387
               

               
Cow position:
               
chr17:21628438-21628615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
57, 160
               

               
Conread position:
               
212-391
               

               
Cow position:
               
chr17:22032732-22032553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
212-392
               

               
Cow position:
               
chr17:22245950-22246138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
212-395
               

               
Cow position:
               
chr17:13244082-13243904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
212-397
               

               
Cow position:
               
chr17:4213704-4213890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
212-399
               

               
Cow position:
               
chr17:17222303-17222490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
212-399
               

               
Cow position:
               
chr17:21743896-21744081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
212-401
               

               
Cow position:
               
chr17:2662382-2662576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
212-401
               

               
Cow position:
               
chr17:16371214-16371409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
212-401
               

               
Cow position:
               
chr17:25342781-25342589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
212-401
               

               
Cow position:
               
chr17:27058597-27058405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
212-401
               

               
Cow position:
               
chr17:30718460-30718266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
212-401
               

               
Cow position:
               
chr17:36814318-36814513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
212-403
               

               
Cow position:
               
chr17:9056742-9056544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
212-404
               

               
Cow position:
               
chr17:40741607-40741806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 173
               

               
Conread position:
               
212-405
               

               
Cow position:
               
chr17:1035639-1035441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 161
               

               
Conread position:
               
212-405
               

               
Cow position:
               
chr17:12108764-12108961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
212-405
               

               
Cow position:
               
chr17:24559252-24559446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
212-406
               

               
Cow position:
               
chr17:2810584-2810789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
212-406
               

               
Cow position:
               
chr17:21293082-21292891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
212-410
               

               
Cow position:
               
chr17:21680723-21680940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
212-410
               

               
Cow position:
               
chr17:39857346-39857546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 165
               

               
Conread position:
               
212-411
               

               
Cow position:
               
chr17:11215273-11215069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
212-411
               

               
Cow position:
               
chr17:34595899-34596100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 160
               

               
Conread position:
               
212-412
               

               
Cow position:
               
chr17:20884481-20884686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
212-412
               

               
Cow position:
               
chr17:21806493-21806289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
212-412
               

               
Cow position:
               
chr17:25189246-25189448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
212-412
               

               
Cow position:
               
chr17:27203085-27202883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 187
               

               
Conread position:
               
212-412
               

               
Cow position:
               
chr17:40771795-40771994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:2275433-2275634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:4786537-4786325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:7142824-7143026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:8079275-8079476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:13940360-13940157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:17410249-17410457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:20335623-20335813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:20874352-20874561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:21738917-21738710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:21755471-21755270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:22057064-22056864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 35
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:24077362-24077565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:24883609-24883407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:25126310-25126513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
57, 188
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:30359432-30359621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:31856629-31856833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
52, 174
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:36864589-36864796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr17:40289037-40288837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
215-406
               

               
Cow position:
               
chr17:26806860-26807053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
215-413
               

               
Cow position:
               
chr17:7698015-7698213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
215-413
               

               
Cow position:
               
chr17:12219975-12219775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 83
               

               
Conread position:
               
215-413
               

               
Cow position:
               
chr17:17193454-17193650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
216-383
               

               
Cow position:
               
chr17:23798241-23798416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr17:20810527-20810342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr17:979193-979015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr17:3353844-3354034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 143
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr17:6848768-6848946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr17:10458975-10458780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr17:15684475-15684662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr17:16158453-16158643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr17:36275300-36275485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
216-402
               

               
Cow position:
               
chr17:20993077-20992889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr17:7803213-7803020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr17:18818530-18818723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr17:28982141-28982335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 132
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr17:1562809-1562630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr17:10432014-10431818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 194
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr17:18720487-18720290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr17:20780473-20780673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr17:20848485-20848679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr17:21489661-21489468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr17:22806575-22806386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr17:24580334-24580139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
216-407
               

               
Cow position:
               
chr17:5224363-5224558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
216-408
               

               
Cow position:
               
chr17:25502072-25502269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 100
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr17:21758176-21757980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 92
               

               
Conread position:
               
216-411
               

               
Cow position:
               
chr17:9770473-9770664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 90
               

               
Conread position:
               
216-411
               

               
Cow position:
               
chr17:14003780-14003987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 169
               

               
Conread position:
               
216-411
               

               
Cow position:
               
chr17:31481073-31480879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
216-412
               

               
Cow position:
               
chr17:21959724-21959525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
216-412
               

               
Cow position:
               
chr17:22127883-22128085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
216-412
               

               
Cow position:
               
chr17:26789382-26789582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
216-412
               

               
Cow position:
               
chr17:38833005-38833206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:1025858-1025661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:1469338-1469539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:1493188-1492985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:9117609-9117808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:9853949-9854139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:11839678-11839886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:20234191-20234375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:21325295-21325496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:24587584-24587788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:25097425-25097618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:30665234-30665433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 171
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:32273724-32273523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:32349035-32349232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:37816228-37816029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 166
               

               
Conread position:
               
216-414
               

               
Cow position:
               
chr17:9746477-9746677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
216-414
               

               
Cow position:
               
chr17:20932292-20932496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
218-400
               

               
Cow position:
               
chr17:7760501-7760322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
218-405
               

               
Cow position:
               
chr17:11215927-11215739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
218-412
               

               
Cow position:
               
chr17:6329078-6329278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
219-405
               

               
Cow position:
               
chr17:28814534-28814337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
219-412
               

               
Cow position:
               
chr17:24862429-24862621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
219-413
               

               
Cow position:
               
chr17:15340788-15340588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
220-400
               

               
Cow position:
               
chr17:8544274-8544455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 163
               

               
Conread position:
               
220-401
               

               
Cow position:
               
chr17:9824635-9824821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
220-410
               

               
Cow position:
               
chr17:10561596-10561794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
220-412
               

               
Cow position:
               
chr17:21335728-21335530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
220-413
               

               
Cow position:
               
chr17:7590493-7590297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
220-413
               

               
Cow position:
               
chr17:27048124-27048319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
220-414
               

               
Cow position:
               
chr17:26448509-26448706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
221-370
               

               
Cow position:
               
chr17:14762154-14762001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
221-395
               

               
Cow position:
               
chr17:11156524-11156348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 114
               

               
Conread position:
               
221-400
               

               
Cow position:
               
chr17:9565275-9565451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
221-401
               

               
Cow position:
               
chr17:16616784-16616965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
43, 157
               

               
Conread position:
               
221-404
               

               
Cow position:
               
chr17:30529574-30529390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
221-413
               

               
Cow position:
               
chr17:11832153-11831949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
222-367
               

               
Cow position:
               
chr17:32265518-32265372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
223-401
               

               
Cow position:
               
chr17:24613190-24613368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
223-405
               

               
Cow position:
               
chr17:14848576-14848392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
223-406
               

               
Cow position:
               
chr17:21495346-21495528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
223-412
               

               
Cow position:
               
chr17:40673349-40673533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 24
               

               
Conread position:
               
223-413
               

               
Cow position:
               
chr17:35149559-35149366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
224-403
               

               
Cow position:
               
chr17:34751435-34751252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 89
               

               
Conread position:
               
224-405
               

               
Cow position:
               
chr17:21922663-21922478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
224-413
               

               
Cow position:
               
chr17:5011819-5012002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
224-413
               

               
Cow position:
               
chr17:25916867-25917059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 166
               

               
Conread position:
               
224-413
               

               
Cow position:
               
chr17:43957635-43957824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
225-413
               

               
Cow position:
               
chr17:27303987-27303805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
226-355
               

               
Cow position:
               
chr17:21604386-21604519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
226-407
               

               
Cow position:
               
chr17:39715130-39715313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 132
               

               
Conread position:
               
226-413
               

               
Cow position:
               
chr17:32138451-32138261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 181
               

               
Conread position:
               
227-404
               

               
Cow position:
               
chr17:5898557-5898372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
227-410
               

               
Cow position:
               
chr17:29356261-29356079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
227-413
               

               
Cow position:
               
chr17:18767020-18766829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
228-412
               

               
Cow position:
               
chr17:40312681-40312869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
229-412
               

               
Cow position:
               
chr17:7571075-7571266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
231-412
               

               
Cow position:
               
chr17:25584216-25584404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
232-413
               

               
Cow position:
               
chr17:14025934-14025746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
233-382
               

               
Cow position:
               
chr17:7851066-7851220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
236-412
               

               
Cow position:
               
chr17:34836152-34836334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
238-413
               

               
Cow position:
               
chr17:5013093-5012911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
241-406
               

               
Cow position:
               
chr17:3067869-3067702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
252-383
               

               
Cow position:
               
chr17:25169079-25169211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
253-400
               

               
Cow position:
               
chr17:1350454-1350602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
253-414
               

               
Cow position:
               
chr17:32554040-32553890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
255-413
               

               
Cow position:
               
chr17:11281097-11280936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
257-401
               

               
Cow position:
               
chr17:4833521-4833377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 137
               

               
Conread position:
               
257-406
               

               
Cow position:
               
chr17:25930532-25930383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
52, 113
               

               
Conread position:
               
259-401
               

               
Cow position:
               
chr17:12342471-12342329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
260-404
               

               
Cow position:
               
chr17:26072752-26072606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
262-403
               

               
Cow position:
               
chr17:12288807-12288948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
48, 132
               

               
Conread position:
               
262-413
               

               
Cow position:
               
chr17:8986594-8986440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
263-413
               

               
Cow position:
               
chr17:25467000-25467146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
264-413
               

               
Cow position:
               
chr17:5900383-5900533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
264-413
               

               
Cow position:
               
chr17:29245457-29245607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr17:10769494-10769363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
267-403
               

               
Cow position:
               
chr17:34836091-34835953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
267-404
               

               
Cow position:
               
chr17:37129216-37129354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
267-406
               

               
Cow position:
               
chr17:20905082-20904945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
267-406
               

               
Cow position:
               
chr17:40355275-40355415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
267-413
               

               
Cow position:
               
chr17:9935790-9935645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
268-411
               

               
Cow position:
               
chr17:11224122-11224261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
271-406
               

               
Cow position:
               
chr17:35334116-35334252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
271-413
               

               
Cow position:
               
chr17:5719892-5720035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
271-413
               

               
Cow position:
               
chr17:22074477-22074334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
271-413
               

               
Cow position:
               
chr17:25193506-25193363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
272-413
               

               
Cow position:
               
chr17:20929263-20929405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
272-413
               

               
Cow position:
               
chr17:35542147-35542006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
272-413
               

               
Cow position:
               
chr17:37430483-37430341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
274-413
               

               
Cow position:
               
chr17:8823336-8823476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
276-413
               

               
Cow position:
               
chr17:33653664-33653522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
279-401
               

               
Cow position:
               
chr17:29292351-29292230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
279-406
               

               
Cow position:
               
chr17:5743262-5743134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
280-413
               

               
Cow position:
               
chr17:5423039-5422905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
282-414
               

               
Cow position:
               
chr17:10508402-10508270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
284-413
               

               
Cow position:
               
chr17:9078187-9078058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
287-410
               

               
Cow position:
               
chr17:25139300-25139425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
288-413
               

               
Cow position:
               
chr17:10802919-10803040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
292-413
               

               
Cow position:
               
chr17:968926-969047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
293-413
               

               
Cow position:
               
chr17:5344660-5344781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
298-413
               

               
Cow position:
               
chr17:18776139-18776022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
308-412
               

               
Cow position:
               
chr17:6318044-6317939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
309-413
               

               
Cow position:
               
chr17:10650173-10650276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
310-412
               

               
Cow position:
               
chr17:10825541-10825643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
313-406
               

               
Cow position:
               
chr17:21363445-21363538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.