Cow genome map

Conread name: rpigcf0_000672.y1

Conread position: 1-119
Cow position: chr23:8287477-8287359 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 55

Conread position: 1-135
Cow position: chr23:16055310-16055173 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 2-139
Cow position: chr23:16497708-16497846 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 3-129
Cow position: chr23:4435187-4435060 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 3-132
Cow position: chr23:19491086-19490956 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 3-138
Cow position: chr23:19949051-19949187 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 3-141
Cow position: chr23:32351227-32351366 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 3-142
Cow position: chr23:38692026-38691886 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 3-142
Cow position: chr23:41141692-41141832 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 3-143
Cow position: chr23:4639057-4639196 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 136, 0

Conread position: 3-143
Cow position: chr23:11714331-11714471 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 137

Conread position: 3-143
Cow position: chr23:15527112-15526972 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 137

Conread position: 3-143
Cow position: chr23:28304450-28304310 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 137

Conread position: 4-136
Cow position: chr23:5873038-5873172 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 6-132
Cow position: chr23:4818554-4818428 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 196-405
Cow position: chr23:20388745-20388536 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 10

Conread position: 211-413
Cow position: chr23:18402370-18402163 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 212-362
Cow position: chr23:1921306-1921152 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 212-377
Cow position: chr23:15710153-15709982 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 58

Conread position: 212-391
Cow position: chr23:36309340-36309524 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 95

Conread position: 212-391
Cow position: chr23:37065762-37065953 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 212-393
Cow position: chr23:3262576-3262392 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 118

Conread position: 212-397
Cow position: chr23:4726707-4726901 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 99

Conread position: 212-401
Cow position: chr23:5617497-5617687 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 212-401
Cow position: chr23:29069523-29069327 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 212-401
Cow position: chr23:33711681-33711873 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 52, 175

Conread position: 212-401
Cow position: chr23:40844572-40844763 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 126

Conread position: 212-404
Cow position: chr23:2405823-2406018 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 20

Conread position: 212-405
Cow position: chr23:16582989-16582792 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 212-405
Cow position: chr23:18416127-18415938 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 97, 140

Conread position: 212-405
Cow position: chr23:28945145-28944951 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 41

Conread position: 212-406
Cow position: chr23:9734334-9734527 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 97, 0

Conread position: 212-406
Cow position: chr23:13599264-13599459 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 54, 99

Conread position: 212-406
Cow position: chr23:15743011-15743208 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 31

Conread position: 212-408
Cow position: chr23:10014458-10014645 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 65

Conread position: 212-409
Cow position: chr23:1885252-1885051 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 212-409
Cow position: chr23:26632722-26632926 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 158

Conread position: 212-411
Cow position: chr23:21336567-21336361 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 199

Conread position: 212-411
Cow position: chr23:26949119-26949320 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 212-413
Cow position: chr23:4327770-4327574 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 97, 46

Conread position: 212-413
Cow position: chr23:4968601-4968404 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 158

Conread position: 212-413
Cow position: chr23:5162347-5162555 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 107

Conread position: 212-413
Cow position: chr23:7596412-7596228 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 40

Conread position: 212-413
Cow position: chr23:10554089-10553883 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 40

Conread position: 212-413
Cow position: chr23:12091439-12091231 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 198

Conread position: 212-413
Cow position: chr23:13511654-13511851 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 97, 60

Conread position: 212-413
Cow position: chr23:13520370-13520578 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 41

Conread position: 212-413
Cow position: chr23:13945955-13946163 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 134

Conread position: 212-413
Cow position: chr23:14164481-14164267 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 212-413
Cow position: chr23:16780630-16780436 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 212-413
Cow position: chr23:18296728-18296933 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 101

Conread position: 212-413
Cow position: chr23:21446039-21446242 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 122

Conread position: 212-413
Cow position: chr23:23409659-23409857 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 97, 46

Conread position: 212-413
Cow position: chr23:25864774-25864571 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 84, 50

Conread position: 212-413
Cow position: chr23:33601608-33601413 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 93

Conread position: 212-413
Cow position: chr23:36172441-36172650 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 0

Conread position: 212-413
Cow position: chr23:38455262-38455052 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 212-413
Cow position: chr23:40789897-40790096 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 24

Conread position: 212-414
Cow position: chr23:1337381-1337183 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 145

Conread position: 212-414
Cow position: chr23:22573997-22573782 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 215-411
Cow position: chr23:5881596-5881394 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 215-413
Cow position: chr23:24704204-24704417 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 216-380
Cow position: chr23:18322492-18322334 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 37

Conread position: 216-382
Cow position: chr23:12050284-12050451 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 26

Conread position: 216-391
Cow position: chr23:24984244-24984066 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 121

Conread position: 216-394
Cow position: chr23:27544752-27544934 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 216-399
Cow position: chr23:11224781-11224967 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 21

Conread position: 216-400
Cow position: chr23:14838817-14838632 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 27

Conread position: 216-401
Cow position: chr23:20002178-20002368 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 116

Conread position: 216-406
Cow position: chr23:6035359-6035549 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 116

Conread position: 216-406
Cow position: chr23:16700115-16699923 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 216-406
Cow position: chr23:19774697-19774887 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 94, 56

Conread position: 216-406
Cow position: chr23:22298112-22297920 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 20

Conread position: 216-406
Cow position: chr23:26794989-26794799 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 141

Conread position: 216-406
Cow position: chr23:34356567-34356759 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 143

Conread position: 216-411
Cow position: chr23:1398113-1397915 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 0

Conread position: 216-412
Cow position: chr23:187101-187303 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 30

Conread position: 216-412
Cow position: chr23:4966743-4966943 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 101

Conread position: 216-412
Cow position: chr23:20194993-20194802 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 53, 65

Conread position: 216-412
Cow position: chr23:39753041-39753238 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 11

Conread position: 216-413
Cow position: chr23:1655818-1656020 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 216-413
Cow position: chr23:1767753-1767958 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 216-413
Cow position: chr23:1923913-1923710 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 70

Conread position: 216-413
Cow position: chr23:3967635-3967434 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 105, 46

Conread position: 216-413
Cow position: chr23:6592776-6592582 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 97

Conread position: 216-413
Cow position: chr23:6995059-6994857 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 216-413
Cow position: chr23:11129154-11129358 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 176

Conread position: 216-413
Cow position: chr23:32480110-32479892 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 216-413
Cow position: chr23:38208649-38208852 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 142

Conread position: 216-413
Cow position: chr23:39083373-39083576 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 184

Conread position: 217-413
Cow position: chr23:10416494-10416302 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 25

Conread position: 217-413
Cow position: chr23:38845530-38845724 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 66

Conread position: 220-378
Cow position: chr23:19371143-19370984 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 220-384
Cow position: chr23:25378582-25378743 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 89, 42

Conread position: 220-401
Cow position: chr23:29345833-29345655 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 90

Conread position: 220-401
Cow position: chr23:35247293-35247481 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 220-406
Cow position: chr23:1742284-1742472 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 44, 123

Conread position: 220-406
Cow position: chr23:33622225-33622031 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 220-413
Cow position: chr23:30950884-30951081 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 42, 187

Conread position: 221-400
Cow position: chr23:283467-283280 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 5

Conread position: 221-412
Cow position: chr23:40648805-40648606 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 221-413
Cow position: chr23:1254616-1254813 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 223-401
Cow position: chr23:5603354-5603171 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 223-403
Cow position: chr23:13555507-13555324 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 118

Conread position: 223-403
Cow position: chr23:15287207-15287023 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 40, 160

Conread position: 224-385
Cow position: chr23:4562817-4562983 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 224-401
Cow position: chr23:3247516-3247701 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 168

Conread position: 225-413
Cow position: chr23:10876328-10876526 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 91

Conread position: 226-405
Cow position: chr23:20435123-20434946 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 37

Conread position: 226-406
Cow position: chr23:39775658-39775844 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 153

Conread position: 226-413
Cow position: chr23:37961-38153 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 31

Conread position: 226-413
Cow position: chr23:5436711-5436517 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 39, 163

Conread position: 226-413
Cow position: chr23:14739377-14739574 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 226-413
Cow position: chr23:18822925-18823115 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 228-413
Cow position: chr23:30662697-30662512 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 49

Conread position: 230-403
Cow position: chr23:30311986-30311807 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 7

Conread position: 231-401
Cow position: chr23:35503723-35503886 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 12

Conread position: 232-406
Cow position: chr23:1701110-1701290 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 234-406
Cow position: chr23:35929898-35930069 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 19

Conread position: 234-414
Cow position: chr23:1936694-1936515 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 75, 25

Conread position: 236-413
Cow position: chr23:21309469-21309287 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 147

Conread position: 237-412
Cow position: chr23:3244522-3244344 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 240-401
Cow position: chr23:17484891-17484733 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 63

Conread position: 249-401
Cow position: chr23:28529986-28529841 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 250-406
Cow position: chr23:29479849-29480004 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 78

Conread position: 252-400
Cow position: chr23:30655844-30655701 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 252-401
Cow position: chr23:23904364-23904214 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 252-413
Cow position: chr23:360726-360562 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 93

Conread position: 253-401
Cow position: chr23:25371789-25371939 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 123

Conread position: 253-405
Cow position: chr23:27563740-27563588 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 121

Conread position: 254-411
Cow position: chr23:348984-348824 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 8

Conread position: 255-411
Cow position: chr23:4336035-4336190 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 77

Conread position: 260-405
Cow position: chr23:13137964-13137818 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 115

Conread position: 261-413
Cow position: chr23:26283697-26283848 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 48, 100

Conread position: 262-413
Cow position: chr23:4877334-4877486 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 262-413
Cow position: chr23:16447713-16447563 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 59

Conread position: 263-413
Cow position: chr23:306497-306648 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 263-413
Cow position: chr23:307430-307581 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 264-401
Cow position: chr23:20563672-20563809 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 45, 105

Conread position: 264-406
Cow position: chr23:4972742-4972884 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 72

Conread position: 267-413
Cow position: chr23:22238843-22238696 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 268-413
Cow position: chr23:14895694-14895548 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 270-382
Cow position: chr23:1803926-1803815 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 102

Conread position: 270-412
Cow position: chr23:41348642-41348500 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 134

Conread position: 271-406
Cow position: chr23:57181-57043 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 271-413
Cow position: chr23:3835612-3835470 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 62

Conread position: 271-413
Cow position: chr23:14569518-14569375 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 272-401
Cow position: chr23:27790001-27790130 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 80

Conread position: 275-411
Cow position: chr23:18787297-18787162 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 19

Conread position: 279-401
Cow position: chr23:4054208-4054331 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 279-412
Cow position: chr23:32621274-32621410 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 283-413
Cow position: chr23:12405825-12405695 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 293-412
Cow position: chr23:38993086-38992965 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 71

Conread position: 293-413
Cow position: chr23:5203927-5203807 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 72

Conread position: 308-413
Cow position: chr23:18417113-18417218 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 309-401
Cow position: chr23:22826419-22826327 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 311-413
Cow position: chr23:5387067-5386965 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 314-401
Cow position: chr23:29972413-29972501 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.