Cow genome map
| Conread name: | rpigcf0_000672.y1 |
| Conread position: | 1-132 |
| Cow position: | chr24:6338009-6337879 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 3-135 |
| Cow position: | chr24:14383004-14383136 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 72 |
| Conread position: | 3-138 |
| Cow position: | chr24:23504235-23504371 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-138 |
| Cow position: | chr24:36723444-36723312 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 124, 87 |
| Conread position: | 3-139 |
| Cow position: | chr24:5991601-5991738 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-141 |
| Cow position: | chr24:9187117-9187256 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-141 |
| Cow position: | chr24:12699199-12699338 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-141 |
| Cow position: | chr24:13044003-13044142 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-142 |
| Cow position: | chr24:310492-310352 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-142 |
| Cow position: | chr24:44019133-44018993 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-143 |
| Cow position: | chr24:6407657-6407520 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 3-143 |
| Cow position: | chr24:6436108-6435968 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 137 |
| Conread position: | 3-143 |
| Cow position: | chr24:12087824-12087684 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 137 |
| Conread position: | 3-143 |
| Cow position: | chr24:12334106-12334246 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 137 |
| Conread position: | 3-143 |
| Cow position: | chr24:14755623-14755483 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 137 |
| Conread position: | 3-143 |
| Cow position: | chr24:16083156-16083296 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 137 |
| Conread position: | 3-145 |
| Cow position: | chr24:11151612-11151754 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 117, 129 |
| Conread position: | 4-141 |
| Cow position: | chr24:7063166-7063028 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 6-143 |
| Cow position: | chr24:9545676-9545538 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 9-136 |
| Cow position: | chr24:8606435-8606306 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 9-143 |
| Cow position: | chr24:146993-147127 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 131 |
| Conread position: | 195-413 |
| Cow position: | chr24:28699929-28700150 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 200-403 |
| Cow position: | chr24:28553670-28553475 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 200-406 |
| Cow position: | chr24:29063771-29063567 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 212-370 |
| Cow position: | chr24:18999943-19000104 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 212-370 |
| Cow position: | chr24:40837670-40837828 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 49, 91 |
| Conread position: | 212-395 |
| Cow position: | chr24:17752220-17752032 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 55, 180 |
| Conread position: | 212-398 |
| Cow position: | chr24:43432686-43432872 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 95 |
| Conread position: | 212-402 |
| Cow position: | chr24:43364253-43364446 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 212-403 |
| Cow position: | chr24:12851609-12851795 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 56, 82 |
| Conread position: | 212-405 |
| Cow position: | chr24:4724868-4725060 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 212-405 |
| Cow position: | chr24:18017121-18017318 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 41 |
| Conread position: | 212-405 |
| Cow position: | chr24:40850057-40850243 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 212-406 |
| Cow position: | chr24:352712-352515 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 135 |
| Conread position: | 212-406 |
| Cow position: | chr24:16895237-16895047 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 212-406 |
| Cow position: | chr24:18970614-18970416 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 212-406 |
| Cow position: | chr24:22647444-22647250 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 25 |
| Conread position: | 212-410 |
| Cow position: | chr24:34496012-34496220 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 212-411 |
| Cow position: | chr24:3493779-3493981 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 212-411 |
| Cow position: | chr24:29595917-29595714 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 178 |
| Conread position: | 212-411 |
| Cow position: | chr24:35150415-35150615 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 53, 119 |
| Conread position: | 212-412 |
| Cow position: | chr24:2095997-2095785 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 207 |
| Conread position: | 212-412 |
| Cow position: | chr24:39905557-39905349 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 80 |
| Conread position: | 212-413 |
| Cow position: | chr24:17832920-17832722 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 99 |
| Conread position: | 212-413 |
| Cow position: | chr24:18741677-18741473 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 212-413 |
| Cow position: | chr24:19769381-19769594 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 212-413 |
| Cow position: | chr24:29606150-29605933 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 212-413 |
| Cow position: | chr24:33944296-33944500 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 212-413 |
| Cow position: | chr24:34008683-34008474 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 212-413 |
| Cow position: | chr24:35576641-35576441 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 212-413 |
| Cow position: | chr24:42825601-42825406 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 215-385 |
| Cow position: | chr24:21894944-21895120 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 136 |
| Conread position: | 215-413 |
| Cow position: | chr24:18614895-18615099 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 164 |
| Conread position: | 215-413 |
| Cow position: | chr24:20801449-20801247 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 215-413 |
| Cow position: | chr24:37395313-37395113 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 216-391 |
| Cow position: | chr24:19736438-19736257 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 216-398 |
| Cow position: | chr24:32054557-32054744 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 153 |
| Conread position: | 216-401 |
| Cow position: | chr24:27418204-27418017 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 48, 100 |
| Conread position: | 216-403 |
| Cow position: | chr24:38841512-38841332 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 182, 58 |
| Conread position: | 216-406 |
| Cow position: | chr24:17104675-17104478 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 216-406 |
| Cow position: | chr24:18485100-18484905 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 138 |
| Conread position: | 216-407 |
| Cow position: | chr24:29389138-29389328 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 93, 48 |
| Conread position: | 216-410 |
| Cow position: | chr24:28690584-28690780 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 216-411 |
| Cow position: | chr24:39523550-39523352 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-412 |
| Cow position: | chr24:28721788-28721982 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 115 |
| Conread position: | 216-412 |
| Cow position: | chr24:32070864-32071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 216-413 |
| Cow position: | chr24:11119182-11119376 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 42 |
| Conread position: | 216-413 |
| Cow position: | chr24:11840086-11840284 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 173 |
| Conread position: | 216-413 |
| Cow position: | chr24:16089127-16089326 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 216-413 |
| Cow position: | chr24:16509868-16510076 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-413 |
| Cow position: | chr24:17955544-17955346 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 216-413 |
| Cow position: | chr24:18390391-18390202 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 42 |
| Conread position: | 216-413 |
| Cow position: | chr24:19186853-19187036 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 216-413 |
| Cow position: | chr24:29673417-29673619 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 168 |
| Conread position: | 216-413 |
| Cow position: | chr24:31159514-31159714 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 99 |
| Conread position: | 216-413 |
| Cow position: | chr24:32204897-32204696 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 216-413 |
| Cow position: | chr24:33465715-33465523 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 93, 46 |
| Conread position: | 216-413 |
| Cow position: | chr24:41405794-41405993 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 95, 45 |
| Conread position: | 219-397 |
| Cow position: | chr24:12452682-12452866 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 146 |
| Conread position: | 220-395 |
| Cow position: | chr24:33723945-33723764 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 220-410 |
| Cow position: | chr24:24662229-24662035 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 50, 112 |
| Conread position: | 220-410 |
| Cow position: | chr24:29170870-29171057 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 89, 33 |
| Conread position: | 220-411 |
| Cow position: | chr24:15861699-15861497 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 220-412 |
| Cow position: | chr24:19466020-19465820 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 172 |
| Conread position: | 220-412 |
| Cow position: | chr24:29679408-29679213 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 115 |
| Conread position: | 220-412 |
| Cow position: | chr24:34742653-34742851 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 220-413 |
| Cow position: | chr24:15373308-15373504 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 220-413 |
| Cow position: | chr24:18331623-18331819 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 221-413 |
| Cow position: | chr24:28327184-28326981 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 104 |
| Conread position: | 223-393 |
| Cow position: | chr24:28045655-28045838 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 223-394 |
| Cow position: | chr24:8886814-8886990 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 223-394 |
| Cow position: | chr24:24061905-24061724 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 223-401 |
| Cow position: | chr24:28600535-28600345 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 223-406 |
| Cow position: | chr24:19535350-19535164 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 223-406 |
| Cow position: | chr24:42876982-42876799 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 86, 113 |
| Conread position: | 223-406 |
| Cow position: | chr24:43832427-43832622 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 223-410 |
| Cow position: | chr24:27290773-27290969 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 223-411 |
| Cow position: | chr24:24755347-24755546 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 223-411 |
| Cow position: | chr24:39911133-39910937 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 163 |
| Conread position: | 223-413 |
| Cow position: | chr24:28289345-28289155 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 45, 35 |
| Conread position: | 223-413 |
| Cow position: | chr24:44987474-44987276 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 224-395 |
| Cow position: | chr24:7046843-7046669 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 224-401 |
| Cow position: | chr24:32370013-32369828 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 224-406 |
| Cow position: | chr24:41068170-41068352 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 85, 47 |
| Conread position: | 224-413 |
| Cow position: | chr24:30484045-30483842 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 226-401 |
| Cow position: | chr24:24457342-24457164 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 167 |
| Conread position: | 226-411 |
| Cow position: | chr24:6102732-6102924 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 227-406 |
| Cow position: | chr24:34390195-34390368 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 227-413 |
| Cow position: | chr24:21519342-21519526 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 230-405 |
| Cow position: | chr24:7476441-7476262 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 230-413 |
| Cow position: | chr24:6151705-6151887 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 232-406 |
| Cow position: | chr24:2992965-2992790 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 232-406 |
| Cow position: | chr24:19623771-19623947 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 233-413 |
| Cow position: | chr24:7777705-7777530 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 235-409 |
| Cow position: | chr24:16268212-16268034 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 235-413 |
| Cow position: | chr24:16118281-16118459 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 258-412 |
| Cow position: | chr24:40404866-40404714 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 261-406 |
| Cow position: | chr24:390050-390195 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 261-412 |
| Cow position: | chr24:29586942-29587098 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 261-414 |
| Cow position: | chr24:11007406-11007557 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 132, 48 |
| Conread position: | 262-398 |
| Cow position: | chr24:34555983-34556118 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 262-412 |
| Cow position: | chr24:22999964-23000112 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 127, 39 |
| Conread position: | 262-413 |
| Cow position: | chr24:20969716-20969566 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 8, 48 |
| Conread position: | 263-413 |
| Cow position: | chr24:28470732-28470581 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 264-413 |
| Cow position: | chr24:18750653-18750806 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 267-412 |
| Cow position: | chr24:27202041-27202186 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 48, 42 |
| Conread position: | 271-397 |
| Cow position: | chr24:15347545-15347672 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 38, 118 |
| Conread position: | 271-412 |
| Cow position: | chr24:42726406-42726550 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 271-413 |
| Cow position: | chr24:18313984-18313834 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 271-413 |
| Cow position: | chr24:34465550-34465408 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 138 |
| Conread position: | 274-411 |
| Cow position: | chr24:22133130-22133268 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 277-413 |
| Cow position: | chr24:255991-256125 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 279-413 |
| Cow position: | chr24:32891080-32890945 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 284-406 |
| Cow position: | chr24:14786348-14786472 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 285-406 |
| Cow position: | chr24:5152493-5152615 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 292-412 |
| Cow position: | chr24:30202801-30202921 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 297-413 |
| Cow position: | chr24:22235449-22235566 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 302-413 |
| Cow position: | chr24:28024266-28024378 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 305-413 |
| Cow position: | chr24:18810822-18810930 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-410 |
| Cow position: | chr24:39218558-39218456 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-411 |
| Cow position: | chr24:27553089-27553191 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 308-413 |
| Cow position: | chr24:32818306-32818205 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.