Cow genome map


           Conread name:
           rpigcf0_000672.y1
        

               Conread position:
               3-141
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               3-142
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               3-142
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               3-143
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-143
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               3-143
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-119
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               211-400
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               98, 9
               

               Conread position:
               211-413
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               212-396
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 166
               

               Conread position:
               212-397
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 28
               

               Conread position:
               212-397
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 145
               

               Conread position:
               212-400
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               212-400
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               97, 59
               

               Conread position:
               212-401
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               212-402
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               60, 96
               

               Conread position:
               212-403
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               212-403
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               212-405
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               212-409
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 96
               

               Conread position:
               212-412
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               97, 35
               

               Conread position:
               212-412
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               55, 50
               

               Conread position:
               212-413
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               176, 99
               

               Conread position:
               212-413
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               212-413
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               212-413
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               212-413
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               212-413
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               57, 30
               

               Conread position:
               212-413
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               52, 122
               

               Conread position:
               212-413
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               59, 31
               

               Conread position:
               215-405
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               216-361
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               216-394
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               216-398
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 113
               

               Conread position:
               216-400
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               48, 97
               

               Conread position:
               216-401
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 90
               

               Conread position:
               216-401
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               216-403
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               216-403
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 22
               

               Conread position:
               216-405
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               216-406
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               216-406
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               216-406
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               216-409
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               216-412
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               50, 156
               

               Conread position:
               216-412
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 27
               

               Conread position:
               216-412
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               216-413
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 151
               

               Conread position:
               216-413
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 194
               

               Conread position:
               216-414
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               93, 31
               

               Conread position:
               217-413
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 115
               

               Conread position:
               217-413
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               220-404
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 33
               

               Conread position:
               220-411
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 156
               

               Conread position:
               221-395
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 116
               

               Conread position:
               221-403
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               221-411
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               221-413
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               223-375
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               223-395
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               223-406
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               45, 87
               

               Conread position:
               223-413
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               47, 178
               

               Conread position:
               223-413
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 113
               

               Conread position:
               223-413
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               224-401
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               224-408
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               224-412
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               7, 127
               

               Conread position:
               224-413
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               40, 124
               

               Conread position:
               226-403
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               226-413
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               226-413
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               228-406
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               34, 106
               

               Conread position:
               230-414
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               231-406
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               232-401
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               77, 94
               

               Conread position:
               241-406
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               24, 120
               

               Conread position:
               241-413
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               248-392
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               249-406
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               249-406
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               255-413
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               262-413
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               264-413
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 65
               

               Conread position:
               264-413
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               267-396
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 65
               

               Conread position:
               267-404
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               267-412
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               267-413
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               271-406
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               271-411
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               271-413
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 55
               

               Conread position:
               272-396
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               273-413
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 73
               

               Conread position:
               279-412
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-413
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               282-412
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               286-413
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               288-403
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               288-406
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               288-406
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               313-406
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.