Cow genome map

Conread name: rpigcf0_000672.y1

Conread position: 3-141
Cow position: chr26:35369534-35369395 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 3-142
Cow position: chr26:28373631-28373771 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 3-142
Cow position: chr26:33148277-33148417 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 3-143
Cow position: chr26:9561185-9561322 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 3-143
Cow position: chr26:12586956-12587096 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 137

Conread position: 3-143
Cow position: chr26:17325676-17325536 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-119
Cow position: chr26:9843103-9843215 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 211-400
Cow position: chr26:1325702-1325884 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 98, 9

Conread position: 211-413
Cow position: chr26:33253386-33253176 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 212-396
Cow position: chr26:4167422-4167231 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 166

Conread position: 212-397
Cow position: chr26:12155183-12154999 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 28

Conread position: 212-397
Cow position: chr26:14578261-14578444 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 145

Conread position: 212-400
Cow position: chr26:8642879-8643068 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 56, 104

Conread position: 212-400
Cow position: chr26:18877023-18876835 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 97, 59

Conread position: 212-401
Cow position: chr26:16549919-16550116 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 212-402
Cow position: chr26:4371580-4371770 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 96

Conread position: 212-403
Cow position: chr26:13818358-13818554 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 25

Conread position: 212-403
Cow position: chr26:32672502-32672298 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 212-405
Cow position: chr26:25526181-25526381 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 212-409
Cow position: chr26:33567111-33566908 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 96

Conread position: 212-412
Cow position: chr26:6714359-6714163 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 97, 35

Conread position: 212-412
Cow position: chr26:34060268-34060472 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 55, 50

Conread position: 212-413
Cow position: chr26:4807496-4807694 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 176, 99

Conread position: 212-413
Cow position: chr26:9104345-9104142 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 52, 30

Conread position: 212-413
Cow position: chr26:13828007-13828204 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 91

Conread position: 212-413
Cow position: chr26:13979194-13978986 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 41

Conread position: 212-413
Cow position: chr26:22354348-22354554 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 212-413
Cow position: chr26:30254693-30254494 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 57, 30

Conread position: 212-413
Cow position: chr26:32776573-32776372 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 52, 122

Conread position: 212-413
Cow position: chr26:32834639-32834439 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 31

Conread position: 215-405
Cow position: chr26:6864953-6865156 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 216-361
Cow position: chr26:21992041-21992190 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 216-394
Cow position: chr26:25393969-25394160 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 216-398
Cow position: chr26:34106337-34106518 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 113

Conread position: 216-400
Cow position: chr26:26294258-26294069 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 48, 97

Conread position: 216-401
Cow position: chr26:798360-798168 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 90

Conread position: 216-401
Cow position: chr26:21243040-21243223 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 97

Conread position: 216-403
Cow position: chr26:8700109-8699917 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 216-403
Cow position: chr26:34108701-34108888 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 22

Conread position: 216-405
Cow position: chr26:32836179-32836371 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 216-406
Cow position: chr26:829742-829938 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 27

Conread position: 216-406
Cow position: chr26:13021207-13021012 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 216-406
Cow position: chr26:17057621-17057812 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 26

Conread position: 216-409
Cow position: chr26:5246541-5246342 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 216-412
Cow position: chr26:12893487-12893289 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 50, 156

Conread position: 216-412
Cow position: chr26:15211740-15211941 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 27

Conread position: 216-412
Cow position: chr26:23599865-23599661 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 21

Conread position: 216-413
Cow position: chr26:4854477-4854684 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 151

Conread position: 216-413
Cow position: chr26:19774363-19774160 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 194

Conread position: 216-414
Cow position: chr26:31137516-31137325 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 31

Conread position: 217-413
Cow position: chr26:11263581-11263779 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 115

Conread position: 217-413
Cow position: chr26:35448999-35449203 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 220-404
Cow position: chr26:2739516-2739324 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 33

Conread position: 220-411
Cow position: chr26:22249535-22249345 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 156

Conread position: 221-395
Cow position: chr26:15200572-15200394 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 116

Conread position: 221-403
Cow position: chr26:12238081-12237898 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 178, 0

Conread position: 221-411
Cow position: chr26:6794092-6794288 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 21

Conread position: 221-413
Cow position: chr26:22152169-22152367 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 223-375
Cow position: chr26:22603094-22602936 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 223-395
Cow position: chr26:26466784-26466610 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 91

Conread position: 223-406
Cow position: chr26:7315159-7314975 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 87

Conread position: 223-413
Cow position: chr26:9604508-9604700 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 47, 178

Conread position: 223-413
Cow position: chr26:33202124-33201930 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 113

Conread position: 223-413
Cow position: chr26:33392337-33392534 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 224-401
Cow position: chr26:14905865-14905680 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 224-408
Cow position: chr26:32601298-32601486 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 68

Conread position: 224-412
Cow position: chr26:613732-613534 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 127

Conread position: 224-413
Cow position: chr26:16921885-16922078 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 40, 124

Conread position: 226-403
Cow position: chr26:10965645-10965462 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 226-413
Cow position: chr26:4585260-4585073 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 112

Conread position: 226-413
Cow position: chr26:9839591-9839409 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 228-406
Cow position: chr26:24453956-24453777 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 106

Conread position: 230-414
Cow position: chr26:11538483-11538675 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 231-406
Cow position: chr26:33011714-33011537 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 112

Conread position: 232-401
Cow position: chr26:5985854-5985689 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 94

Conread position: 241-406
Cow position: chr26:32830046-32830213 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 120

Conread position: 241-413
Cow position: chr26:25074681-25074858 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 248-392
Cow position: chr26:17187063-17186919 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 46

Conread position: 249-406
Cow position: chr26:9099561-9099399 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 47

Conread position: 249-406
Cow position: chr26:32571267-32571426 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 255-413
Cow position: chr26:8352951-8353109 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 9

Conread position: 262-413
Cow position: chr26:19459681-19459834 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 264-413
Cow position: chr26:677990-677840 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 65

Conread position: 264-413
Cow position: chr26:29664169-29664017 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 267-396
Cow position: chr26:32655616-32655485 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 65

Conread position: 267-404
Cow position: chr26:20769844-20769982 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 267-412
Cow position: chr26:34027042-34026898 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 267-413
Cow position: chr26:16435663-16435516 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 271-406
Cow position: chr26:18381311-18381445 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 29

Conread position: 271-411
Cow position: chr26:28374446-28374305 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 271-413
Cow position: chr26:5168395-5168533 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 55

Conread position: 272-396
Cow position: chr26:178230-178357 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 273-413
Cow position: chr26:19671477-19671614 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 73

Conread position: 279-412
Cow position: chr26:9501714-9501847 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 280-413
Cow position: chr26:16796200-16796070 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 47

Conread position: 282-412
Cow position: chr26:5406987-5407118 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 286-413
Cow position: chr26:6823171-6823298 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 23, 54

Conread position: 288-403
Cow position: chr26:13018375-13018259 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 288-406
Cow position: chr26:7183983-7183864 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 288-406
Cow position: chr26:28446597-28446716 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 313-406
Cow position: chr26:33691448-33691355 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.