Cow genome map
| Conread name: | rpigcf0_000672.y1 |
| Conread position: | 1-139 |
| Cow position: | chr28:5766318-5766178 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-143 |
| Cow position: | chr28:5799878-5799735 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 92, 140 |
| Conread position: | 2-143 |
| Cow position: | chr28:14703798-14703941 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 3-132 |
| Cow position: | chr28:5112540-5112670 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 3-138 |
| Cow position: | chr28:1216251-1216383 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 118, 82 |
| Conread position: | 3-138 |
| Cow position: | chr28:7003580-7003446 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 118, 82 |
| Conread position: | 3-138 |
| Cow position: | chr28:15034527-15034663 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 3-139 |
| Cow position: | chr28:1506450-1506314 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-139 |
| Cow position: | chr28:22041701-22041838 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-142 |
| Cow position: | chr28:484010-484149 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 82 |
| Conread position: | 3-142 |
| Cow position: | chr28:6537226-6537366 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-143 |
| Cow position: | chr28:3190668-3190808 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 118, 137 |
| Conread position: | 3-143 |
| Cow position: | chr28:8380621-8380481 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 118, 137 |
| Conread position: | 3-143 |
| Cow position: | chr28:17389985-17389846 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 118, 82 |
| Conread position: | 3-143 |
| Cow position: | chr28:17665723-17665863 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 137 |
| Conread position: | 3-143 |
| Cow position: | chr28:33638128-33637986 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 139 |
| Conread position: | 4-143 |
| Cow position: | chr28:32790811-32790947 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 38 |
| Conread position: | 5-126 |
| Cow position: | chr28:21361075-21360958 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 5-143 |
| Cow position: | chr28:24590439-24590301 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 127 |
| Conread position: | 6-132 |
| Cow position: | chr28:5750122-5750249 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 9-137 |
| Cow position: | chr28:13461549-13461420 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 9-143 |
| Cow position: | chr28:2086043-2085909 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 131 |
| Conread position: | 9-143 |
| Cow position: | chr28:12408647-12408781 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 131 |
| Conread position: | 209-385 |
| Cow position: | chr28:4823525-4823704 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 209-401 |
| Cow position: | chr28:7156761-7156953 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 53, 7 |
| Conread position: | 211-394 |
| Cow position: | chr28:31110082-31109895 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 211-395 |
| Cow position: | chr28:7805502-7805312 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 211-413 |
| Cow position: | chr28:2752573-2752366 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 212-377 |
| Cow position: | chr28:5792629-5792800 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 212-391 |
| Cow position: | chr28:3161031-3160848 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 161 |
| Conread position: | 212-392 |
| Cow position: | chr28:5931275-5931459 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 212-397 |
| Cow position: | chr28:616306-616493 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 161 |
| Conread position: | 212-397 |
| Cow position: | chr28:20313198-20313389 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 212-397 |
| Cow position: | chr28:21380801-21380992 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 51, 163 |
| Conread position: | 212-401 |
| Cow position: | chr28:1632732-1632541 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 212-401 |
| Cow position: | chr28:4282567-4282375 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 212-401 |
| Cow position: | chr28:11346561-11346371 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 212-403 |
| Cow position: | chr28:26685037-26685234 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 212-405 |
| Cow position: | chr28:14933889-14934078 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 97, 52 |
| Conread position: | 212-405 |
| Cow position: | chr28:23296247-23296442 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 212-405 |
| Cow position: | chr28:34230154-34230348 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 212-406 |
| Cow position: | chr28:662031-662229 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 212-406 |
| Cow position: | chr28:5166689-5166888 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 212-406 |
| Cow position: | chr28:8147939-8147743 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 44, 143 |
| Conread position: | 212-406 |
| Cow position: | chr28:12951352-12951538 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 212-406 |
| Cow position: | chr28:22321349-22321540 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 83 |
| Conread position: | 212-406 |
| Cow position: | chr28:24706826-24707018 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 94, 45 |
| Conread position: | 212-411 |
| Cow position: | chr28:17398303-17398108 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 97, 32 |
| Conread position: | 212-411 |
| Cow position: | chr28:17414544-17414349 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 32 |
| Conread position: | 212-411 |
| Cow position: | chr28:23410402-23410197 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 212-411 |
| Cow position: | chr28:27161405-27161201 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 146 |
| Conread position: | 212-412 |
| Cow position: | chr28:5224631-5224826 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 138 |
| Conread position: | 212-413 |
| Cow position: | chr28:2898921-2899117 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 212-413 |
| Cow position: | chr28:4881314-4881112 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 212-413 |
| Cow position: | chr28:5144595-5144393 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 212-413 |
| Cow position: | chr28:21355146-21355359 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 212-413 |
| Cow position: | chr28:25677424-25677213 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 212-413 |
| Cow position: | chr28:32174552-32174757 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 215-413 |
| Cow position: | chr28:4355480-4355674 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 216-359 |
| Cow position: | chr28:5826878-5827024 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 216-390 |
| Cow position: | chr28:21502320-21502501 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 48, 175 |
| Conread position: | 216-395 |
| Cow position: | chr28:26103635-26103811 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 216-401 |
| Cow position: | chr28:13865769-13865955 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 216-401 |
| Cow position: | chr28:14512448-14512650 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 216-401 |
| Cow position: | chr28:16085249-16085441 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 216-401 |
| Cow position: | chr28:23724528-23724343 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 216-403 |
| Cow position: | chr28:1538096-1538279 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 216-405 |
| Cow position: | chr28:5236677-5236484 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 216-406 |
| Cow position: | chr28:5204119-5204316 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 216-406 |
| Cow position: | chr28:23007807-23007609 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 216-406 |
| Cow position: | chr28:26922440-26922247 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 216-407 |
| Cow position: | chr28:13474227-13474421 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 191 |
| Conread position: | 216-407 |
| Cow position: | chr28:21598327-21598129 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 48, 195 |
| Conread position: | 216-410 |
| Cow position: | chr28:7372195-7371997 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 216-410 |
| Cow position: | chr28:8408661-8408849 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 216-412 |
| Cow position: | chr28:4841471-4841263 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 216-413 |
| Cow position: | chr28:7350584-7350782 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 216-413 |
| Cow position: | chr28:7388840-7388644 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 216-413 |
| Cow position: | chr28:11307581-11307389 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 216-413 |
| Cow position: | chr28:19222223-19222024 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 216-413 |
| Cow position: | chr28:21868382-21868586 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 216-413 |
| Cow position: | chr28:25249280-25249482 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 216-413 |
| Cow position: | chr28:25728126-25728323 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 217-401 |
| Cow position: | chr28:18354396-18354211 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 155, 47 |
| Conread position: | 219-412 |
| Cow position: | chr28:20397439-20397244 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 220-354 |
| Cow position: | chr28:17012361-17012225 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 220-390 |
| Cow position: | chr28:32365773-32365949 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 220-411 |
| Cow position: | chr28:7009046-7008852 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 220-412 |
| Cow position: | chr28:24343301-24343491 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 220-413 |
| Cow position: | chr28:3011342-3011142 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 220-413 |
| Cow position: | chr28:26982806-26982610 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 221-397 |
| Cow position: | chr28:13176752-13176577 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 221-401 |
| Cow position: | chr28:22571735-22571552 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 221-413 |
| Cow position: | chr28:11559704-11559504 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 223-377 |
| Cow position: | chr28:3449235-3449395 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 223-400 |
| Cow position: | chr28:5867665-5867836 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 223-401 |
| Cow position: | chr28:23676072-23676254 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 223-403 |
| Cow position: | chr28:26719284-26719462 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 223-406 |
| Cow position: | chr28:3408281-3408098 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 223-413 |
| Cow position: | chr28:4013020-4013212 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 223-413 |
| Cow position: | chr28:7268010-7267818 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 111 |
| Conread position: | 223-413 |
| Cow position: | chr28:25399806-25399995 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 223-413 |
| Cow position: | chr28:29434499-29434300 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 224-407 |
| Cow position: | chr28:17601939-17601753 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 225-401 |
| Cow position: | chr28:4765611-4765792 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 226-377 |
| Cow position: | chr28:25283138-25283286 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 99 |
| Conread position: | 227-390 |
| Cow position: | chr28:11786780-11786612 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 227-403 |
| Cow position: | chr28:14494764-14494941 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 147 |
| Conread position: | 227-405 |
| Cow position: | chr28:30865355-30865537 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 113 |
| Conread position: | 228-406 |
| Cow position: | chr28:20759763-20759581 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 133 |
| Conread position: | 230-401 |
| Cow position: | chr28:13527137-13527311 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 230-413 |
| Cow position: | chr28:751171-751353 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 231-412 |
| Cow position: | chr28:15601217-15601403 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 231-413 |
| Cow position: | chr28:26743566-26743754 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 231-413 |
| Cow position: | chr28:28765963-28765775 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 232-406 |
| Cow position: | chr28:21363688-21363861 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 232-413 |
| Cow position: | chr28:7698037-7697854 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 233-403 |
| Cow position: | chr28:34248080-34247912 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 233-412 |
| Cow position: | chr28:8149682-8149505 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 20 |
| Conread position: | 233-414 |
| Cow position: | chr28:7776560-7776372 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 168 |
| Conread position: | 237-412 |
| Cow position: | chr28:5650790-5650611 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 29, 137 |
| Conread position: | 237-413 |
| Cow position: | chr28:17601605-17601426 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 241-404 |
| Cow position: | chr28:6059519-6059351 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 252-413 |
| Cow position: | chr28:17949147-17948985 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 253-401 |
| Cow position: | chr28:3726243-3726093 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 255-406 |
| Cow position: | chr28:7498178-7498026 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 255-413 |
| Cow position: | chr28:19026036-19025877 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 262-401 |
| Cow position: | chr28:19216798-19216937 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 264-411 |
| Cow position: | chr28:2772691-2772836 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 264-413 |
| Cow position: | chr28:17680600-17680750 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 264-413 |
| Cow position: | chr28:18770062-18770208 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 267-405 |
| Cow position: | chr28:11398816-11398677 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 271-412 |
| Cow position: | chr28:13048298-13048157 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 271-413 |
| Cow position: | chr28:21008680-21008539 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 272-413 |
| Cow position: | chr28:3143889-3143750 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 273-413 |
| Cow position: | chr28:10163787-10163925 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 274-406 |
| Cow position: | chr28:15362567-15362702 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 276-413 |
| Cow position: | chr28:19039029-19038891 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 279-411 |
| Cow position: | chr28:10615953-10615820 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 284-413 |
| Cow position: | chr28:17728101-17727975 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 288-397 |
| Cow position: | chr28:29042052-29041942 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 288-406 |
| Cow position: | chr28:26784239-26784121 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 291-406 |
| Cow position: | chr28:16691928-16692044 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 291-413 |
| Cow position: | chr28:19024440-19024561 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 293-413 |
| Cow position: | chr28:5366116-5365995 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 326-413 |
| Cow position: | chr28:24726396-24726309 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.