Cow genome map
| Conread name: | rpigcf0_000672.y1 |
| Conread position: | 1-136 |
| Cow position: | chr29:14084580-14084712 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-137 |
| Cow position: | chr29:32287799-32287665 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1-138 |
| Cow position: | chr29:13851321-13851461 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-142 |
| Cow position: | chr29:27262162-27262308 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-143 |
| Cow position: | chr29:9641235-9641378 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 101, 140 |
| Conread position: | 3-116 |
| Cow position: | chr29:16172554-16172664 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 3-135 |
| Cow position: | chr29:13583629-13583496 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 3-136 |
| Cow position: | chr29:14587467-14587332 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 3-138 |
| Cow position: | chr29:35298458-35298322 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-141 |
| Cow position: | chr29:18855397-18855536 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-142 |
| Cow position: | chr29:10022784-10022924 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-142 |
| Cow position: | chr29:21431304-21431443 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-142 |
| Cow position: | chr29:27180205-27180345 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-142 |
| Cow position: | chr29:29502711-29502851 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-142 |
| Cow position: | chr29:32558203-32558343 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-142 |
| Cow position: | chr29:38207116-38207256 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-142 |
| Cow position: | chr29:42093313-42093173 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 3-143 |
| Cow position: | chr29:2101387-2101247 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 137 |
| Conread position: | 3-143 |
| Cow position: | chr29:5236569-5236429 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 137 |
| Conread position: | 3-143 |
| Cow position: | chr29:19526738-19526878 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 137 |
| Conread position: | 3-143 |
| Cow position: | chr29:34798263-34798403 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 137 |
| Conread position: | 6-138 |
| Cow position: | chr29:6264455-6264588 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 6-143 |
| Cow position: | chr29:23977668-23977531 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 115, 134 |
| Conread position: | 6-143 |
| Cow position: | chr29:26163288-26163426 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 135 |
| Conread position: | 9-143 |
| Cow position: | chr29:39078169-39078303 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 131 |
| Conread position: | 10-142 |
| Cow position: | chr29:3328880-3328747 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 201-413 |
| Cow position: | chr29:12784051-12783842 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 108, 62 |
| Conread position: | 211-405 |
| Cow position: | chr29:30227358-30227169 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 212-393 |
| Cow position: | chr29:24952604-24952786 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 58, 149 |
| Conread position: | 212-394 |
| Cow position: | chr29:19821203-19821385 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 97, 116 |
| Conread position: | 212-397 |
| Cow position: | chr29:41530763-41530954 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 212-399 |
| Cow position: | chr29:24292786-24292976 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 41 |
| Conread position: | 212-400 |
| Cow position: | chr29:27668747-27668553 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 181 |
| Conread position: | 212-400 |
| Cow position: | chr29:27873520-27873709 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 212-401 |
| Cow position: | chr29:6293558-6293371 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 97, 51 |
| Conread position: | 212-401 |
| Cow position: | chr29:9912088-9912284 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 177 |
| Conread position: | 212-404 |
| Cow position: | chr29:35084306-35084110 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 212-405 |
| Cow position: | chr29:13372581-13372776 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 57, 174 |
| Conread position: | 212-405 |
| Cow position: | chr29:17222329-17222528 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 212-406 |
| Cow position: | chr29:4085235-4085422 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 212-406 |
| Cow position: | chr29:11053943-11053745 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 212-406 |
| Cow position: | chr29:13373215-13373415 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 212-406 |
| Cow position: | chr29:31813864-31814053 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 212-410 |
| Cow position: | chr29:19428575-19428778 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 165 |
| Conread position: | 212-410 |
| Cow position: | chr29:22936186-22936389 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 53, 102 |
| Conread position: | 212-410 |
| Cow position: | chr29:28993776-28993982 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 212-412 |
| Cow position: | chr29:39567603-39567802 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 99 |
| Conread position: | 212-413 |
| Cow position: | chr29:2263081-2262874 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 212-413 |
| Cow position: | chr29:6286242-6286040 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 60, 46 |
| Conread position: | 212-413 |
| Cow position: | chr29:6844712-6844511 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 98, 31 |
| Conread position: | 212-413 |
| Cow position: | chr29:11705039-11705234 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 212-413 |
| Cow position: | chr29:13028353-13028561 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 52, 105 |
| Conread position: | 212-413 |
| Cow position: | chr29:13639454-13639245 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 212-413 |
| Cow position: | chr29:16657606-16657814 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 34 |
| Conread position: | 212-413 |
| Cow position: | chr29:17297050-17297257 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 41 |
| Conread position: | 212-413 |
| Cow position: | chr29:22175603-22175802 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 97, 67 |
| Conread position: | 212-413 |
| Cow position: | chr29:28775541-28775342 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 212-413 |
| Cow position: | chr29:32799792-32799590 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 212-414 |
| Cow position: | chr29:42771565-42771757 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 213-401 |
| Cow position: | chr29:20167339-20167533 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 215-404 |
| Cow position: | chr29:8005004-8004815 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 215-406 |
| Cow position: | chr29:22519211-22519013 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 162 |
| Conread position: | 215-413 |
| Cow position: | chr29:12025551-12025355 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 100 |
| Conread position: | 215-414 |
| Cow position: | chr29:2055977-2056183 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 216-382 |
| Cow position: | chr29:41365032-41365199 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 53, 113 |
| Conread position: | 216-394 |
| Cow position: | chr29:18012474-18012660 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 216-394 |
| Cow position: | chr29:32290528-32290711 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 216-397 |
| Cow position: | chr29:356239-356426 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 216-398 |
| Cow position: | chr29:12626059-12625870 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 216-401 |
| Cow position: | chr29:694081-693900 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 56 |
| Conread position: | 216-403 |
| Cow position: | chr29:12680078-12680266 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 179 |
| Conread position: | 216-405 |
| Cow position: | chr29:4120768-4120967 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 216-405 |
| Cow position: | chr29:42886470-42886656 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 216-406 |
| Cow position: | chr29:26017582-26017388 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 216-406 |
| Cow position: | chr29:36217037-36217226 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 216-410 |
| Cow position: | chr29:4520255-4520454 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 216-412 |
| Cow position: | chr29:29512221-29512021 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 185 |
| Conread position: | 216-413 |
| Cow position: | chr29:707031-706836 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 216-413 |
| Cow position: | chr29:11398004-11397804 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 216-413 |
| Cow position: | chr29:11647009-11647215 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 216-413 |
| Cow position: | chr29:11915740-11915941 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 216-413 |
| Cow position: | chr29:29057099-29057297 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 216-413 |
| Cow position: | chr29:30440851-30441058 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 162 |
| Conread position: | 216-413 |
| Cow position: | chr29:40096883-40097083 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 217-406 |
| Cow position: | chr29:13867291-13867096 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 218-404 |
| Cow position: | chr29:34745739-34745547 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 86 |
| Conread position: | 218-406 |
| Cow position: | chr29:40299092-40298906 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 220-400 |
| Cow position: | chr29:1229532-1229715 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 220-401 |
| Cow position: | chr29:29769427-29769242 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 116 |
| Conread position: | 220-412 |
| Cow position: | chr29:1022219-1022415 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 178 |
| Conread position: | 220-413 |
| Cow position: | chr29:87092-86891 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 172 |
| Conread position: | 220-413 |
| Cow position: | chr29:847717-847521 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 220-413 |
| Cow position: | chr29:35292012-35292213 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 197 |
| Conread position: | 221-401 |
| Cow position: | chr29:10653266-10653441 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 91 |
| Conread position: | 221-411 |
| Cow position: | chr29:28166290-28166103 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 221-413 |
| Cow position: | chr29:23874382-23874581 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 221-413 |
| Cow position: | chr29:24252161-24252352 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 222-401 |
| Cow position: | chr29:27858718-27858896 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 222-413 |
| Cow position: | chr29:5210412-5210612 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 122 |
| Conread position: | 223-401 |
| Cow position: | chr29:17409262-17409444 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 223-405 |
| Cow position: | chr29:34297644-34297455 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 223-406 |
| Cow position: | chr29:9709622-9709809 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 223-410 |
| Cow position: | chr29:16195769-16195958 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 223-413 |
| Cow position: | chr29:11434049-11434238 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 86, 177 |
| Conread position: | 224-406 |
| Cow position: | chr29:23825596-23825787 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 225-401 |
| Cow position: | chr29:28195584-28195412 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 226-385 |
| Cow position: | chr29:40633576-40633735 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 85, 156 |
| Conread position: | 226-413 |
| Cow position: | chr29:26654110-26653922 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 226-414 |
| Cow position: | chr29:32926026-32926226 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 227-411 |
| Cow position: | chr29:109628-109803 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 230-403 |
| Cow position: | chr29:38580911-38581090 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 106 |
| Conread position: | 230-412 |
| Cow position: | chr29:24624180-24624369 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 232-406 |
| Cow position: | chr29:27911527-27911704 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 232-406 |
| Cow position: | chr29:27926710-27926887 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 232-414 |
| Cow position: | chr29:31928921-31929109 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 126 |
| Conread position: | 233-387 |
| Cow position: | chr29:23697916-23698073 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 233-406 |
| Cow position: | chr29:42630058-42630233 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 145 |
| Conread position: | 237-401 |
| Cow position: | chr29:25088691-25088852 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 237-412 |
| Cow position: | chr29:43544661-43544483 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 252-413 |
| Cow position: | chr29:4070586-4070745 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 253-413 |
| Cow position: | chr29:7310635-7310794 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 254-412 |
| Cow position: | chr29:27819178-27819339 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 138 |
| Conread position: | 255-413 |
| Cow position: | chr29:11042395-11042549 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 259-413 |
| Cow position: | chr29:28979531-28979382 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 260-394 |
| Cow position: | chr29:8686297-8686432 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 261-398 |
| Cow position: | chr29:17154745-17154884 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 7, 66 |
| Conread position: | 261-400 |
| Cow position: | chr29:31981799-31981939 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 261-413 |
| Cow position: | chr29:44684071-44684220 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 138, 42 |
| Conread position: | 262-398 |
| Cow position: | chr29:30918518-30918655 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 262-401 |
| Cow position: | chr29:4423470-4423330 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 262-406 |
| Cow position: | chr29:5520517-5520371 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 262-406 |
| Cow position: | chr29:25333488-25333347 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 262-412 |
| Cow position: | chr29:396382-396526 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 262-412 |
| Cow position: | chr29:5788997-5789149 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 264-391 |
| Cow position: | chr29:35501683-35501555 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 264-401 |
| Cow position: | chr29:19559048-19558910 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 264-412 |
| Cow position: | chr29:31934350-31934499 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 265-401 |
| Cow position: | chr29:9310572-9310709 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 265-412 |
| Cow position: | chr29:15947139-15947287 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 266-413 |
| Cow position: | chr29:39329630-39329482 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 267-413 |
| Cow position: | chr29:24188091-24187944 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 271-408 |
| Cow position: | chr29:501177-501313 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 272-411 |
| Cow position: | chr29:1220152-1220012 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 272-413 |
| Cow position: | chr29:16365910-16365764 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 273-413 |
| Cow position: | chr29:3292928-3293068 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 112 |
| Conread position: | 276-413 |
| Cow position: | chr29:24051398-24051261 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 277-410 |
| Cow position: | chr29:12452780-12452915 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 279-412 |
| Cow position: | chr29:16200492-16200358 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 279-412 |
| Cow position: | chr29:34359834-34359701 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 280-397 |
| Cow position: | chr29:37046714-37046596 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 280-413 |
| Cow position: | chr29:36781317-36781183 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 284-413 |
| Cow position: | chr29:16672482-16672612 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 284-413 |
| Cow position: | chr29:19176922-19176786 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 292-411 |
| Cow position: | chr29:14576858-14576978 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 294-411 |
| Cow position: | chr29:19187027-19187145 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 302-413 |
| Cow position: | chr29:26631050-26631164 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 307-409 |
| Cow position: | chr29:19060067-19059966 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 310-414 |
| Cow position: | chr29:8798997-8798893 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.