Cow genome map
| Conread name: | rpigcf0_000927.y1 |
| Conread position: | 1-484 |
| Cow position: | chr1:89262761-89262300 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 230, 66 |
| Conread position: | 1-556 |
| Cow position: | chr1:86020489-86019960 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 53 |
| Conread position: | 2-283 |
| Cow position: | chr1:7202115-7202387 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 3-314 |
| Cow position: | chr1:86364330-86364645 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 3-327 |
| Cow position: | chr1:1743693-1743387 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 50 |
| Conread position: | 3-450 |
| Cow position: | chr1:51376334-51375890 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 320 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 3-542 |
| Cow position: | chr1:98656113-98655598 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 36 |
| Conread position: | 3-564 |
| Cow position: | chr1:62434207-62433650 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 47 |
| Conread position: | 3-566 |
| Cow position: | chr1:21430438-21429853 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 47 |
| Conread position: | 3-572 |
| Cow position: | chr1:72803651-72803110 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 384 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 52, 61 |
| Conread position: | 5-513 |
| Cow position: | chr1:42554850-42555355 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 352 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 5-514 |
| Cow position: | chr1:21934600-21934086 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 332 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 5-526 |
| Cow position: | chr1:22777984-22777442 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 50 |
| Conread position: | 7-458 |
| Cow position: | chr1:7731311-7731765 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 319 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 103, 42 |
| Conread position: | 12-359 |
| Cow position: | chr1:57969460-57969114 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 12-520 |
| Cow position: | chr1:95765515-95764997 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 12-572 |
| Cow position: | chr1:54163224-54162658 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 12-572 |
| Cow position: | chr1:55203022-55202483 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 13-517 |
| Cow position: | chr1:77118946-77118440 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 341 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 15-371 |
| Cow position: | chr1:25856283-25856628 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 96, 48 |
| Conread position: | 15-538 |
| Cow position: | chr1:15036931-15037439 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 345 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 225, 44 |
| Conread position: | 20-357 |
| Cow position: | chr1:81180366-81180046 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 20-572 |
| Cow position: | chr1:18224263-18223725 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 26-443 |
| Cow position: | chr1:56748191-56748620 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 295 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 30, 38 |
| Conread position: | 29-331 |
| Cow position: | chr1:84226770-84226470 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 71-317 |
| Cow position: | chr1:60086255-60086500 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 45, 68 |
| Conread position: | 71-534 |
| Cow position: | chr1:80764888-80764427 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 72-571 |
| Cow position: | chr1:71331908-71331401 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 106 |
| Conread position: | 73-527 |
| Cow position: | chr1:74947479-74947015 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 168 |
| Conread position: | 76-534 |
| Cow position: | chr1:31390931-31390479 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 116-532 |
| Cow position: | chr1:59910039-59910462 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 144-567 |
| Cow position: | chr1:52774805-52774389 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 180 |
| Conread position: | 146-482 |
| Cow position: | chr1:53039983-53039643 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 34, 151 |
| Conread position: | 160-572 |
| Cow position: | chr1:57646413-57646815 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 165-572 |
| Cow position: | chr1:86614603-86615003 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 166-505 |
| Cow position: | chr1:29975859-29975518 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 166-572 |
| Cow position: | chr1:22516287-22516691 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 167-503 |
| Cow position: | chr1:41093131-41092807 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 38 |
| Conread position: | 168-526 |
| Cow position: | chr1:8243112-8243476 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 168-528 |
| Cow position: | chr1:7233056-7233406 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 81, 62 |
| Conread position: | 168-556 |
| Cow position: | chr1:15307774-15308163 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 67, 160 |
| Conread position: | 170-482 |
| Cow position: | chr1:31378182-31377881 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 103, 36 |
| Conread position: | 172-513 |
| Cow position: | chr1:92048579-92048912 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 59, 97 |
| Conread position: | 173-530 |
| Cow position: | chr1:52206437-52206786 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 174-485 |
| Cow position: | chr1:99807976-99807655 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 174-527 |
| Cow position: | chr1:28678284-28678625 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 174-530 |
| Cow position: | chr1:30041472-30041843 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 174-543 |
| Cow position: | chr1:98790378-98790754 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 174-572 |
| Cow position: | chr1:23623905-23624302 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 149 |
| Conread position: | 174-572 |
| Cow position: | chr1:92551389-92551000 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 207 |
| Conread position: | 175-517 |
| Cow position: | chr1:95467592-95467242 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 56, 38 |
| Conread position: | 175-542 |
| Cow position: | chr1:102313115-102312756 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 176-508 |
| Cow position: | chr1:35844182-35843842 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 93 |
| Conread position: | 176-572 |
| Cow position: | chr1:29771981-29771608 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 176-572 |
| Cow position: | chr1:64099515-64099132 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 177-498 |
| Cow position: | chr1:68811390-68811093 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 180-508 |
| Cow position: | chr1:64973399-64973729 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 181-523 |
| Cow position: | chr1:71938758-71938409 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 181-534 |
| Cow position: | chr1:71135906-71136261 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 181-543 |
| Cow position: | chr1:86325858-86325486 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 145 |
| Conread position: | 181-566 |
| Cow position: | chr1:52819070-52819435 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 181-571 |
| Cow position: | chr1:64480223-64479830 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 10 |
| Conread position: | 181-572 |
| Cow position: | chr1:1825532-1825924 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 279 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 181-572 |
| Cow position: | chr1:28567685-28567294 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 182-477 |
| Cow position: | chr1:8869911-8869606 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 182-562 |
| Cow position: | chr1:72181588-72181940 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 90 |
| Conread position: | 183-572 |
| Cow position: | chr1:19440263-19439878 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 166 |
| Conread position: | 183-572 |
| Cow position: | chr1:81371917-81371547 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 184-543 |
| Cow position: | chr1:69249044-69249422 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 185-565 |
| Cow position: | chr1:82406796-82406411 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 186-505 |
| Cow position: | chr1:58882252-58881942 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 188-500 |
| Cow position: | chr1:28284334-28284652 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 139 |
| Conread position: | 188-508 |
| Cow position: | chr1:62732335-62732657 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 195 |
| Conread position: | 189-513 |
| Cow position: | chr1:70933622-70933308 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 157 |
| Conread position: | 190-508 |
| Cow position: | chr1:76096201-76096523 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 44, 110 |
| Conread position: | 191-458 |
| Cow position: | chr1:60120191-60120456 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 138 |
| Conread position: | 191-513 |
| Cow position: | chr1:92642678-92642360 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 191-572 |
| Cow position: | chr1:25886312-25885932 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 134 |
| Conread position: | 195-529 |
| Cow position: | chr1:29648637-29648301 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 199-526 |
| Cow position: | chr1:18283268-18283583 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 201-572 |
| Cow position: | chr1:34892339-34892705 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 149 |
| Conread position: | 202-565 |
| Cow position: | chr1:45573085-45572733 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 29, 138 |
| Conread position: | 202-570 |
| Cow position: | chr1:22495318-22495689 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 203-534 |
| Cow position: | chr1:69415943-69415602 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 28, 209 |
| Conread position: | 203-566 |
| Cow position: | chr1:25119243-25118907 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 209-517 |
| Cow position: | chr1:15691118-15691428 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 22, 115 |
| Conread position: | 227-511 |
| Cow position: | chr1:17291841-17291551 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 94 |
| Conread position: | 233-572 |
| Cow position: | chr1:82865038-82865376 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 234-571 |
| Cow position: | chr1:42174780-42174442 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 52 |
| Conread position: | 237-519 |
| Cow position: | chr1:20581759-20582038 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 245-500 |
| Cow position: | chr1:59808123-59807874 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 248-527 |
| Cow position: | chr1:79115158-79115448 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 255-458 |
| Cow position: | chr1:59518750-59518956 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 89 |
| Conread position: | 255-566 |
| Cow position: | chr1:33085162-33084859 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 256-458 |
| Cow position: | chr1:57782840-57783042 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 122, 88 |
| Conread position: | 257-443 |
| Cow position: | chr1:38525418-38525611 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 257-565 |
| Cow position: | chr1:37739767-37739462 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 261-534 |
| Cow position: | chr1:75347456-75347733 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 251 |
| Conread position: | 295-568 |
| Cow position: | chr1:34310723-34310998 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 172 |
| Conread position: | 302-566 |
| Cow position: | chr1:79250332-79250586 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 309-572 |
| Cow position: | chr1:86364784-86365036 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 315-531 |
| Cow position: | chr1:9512217-9511995 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 35, 161 |
| Conread position: | 315-572 |
| Cow position: | chr1:77169240-77169492 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 322-536 |
| Cow position: | chr1:85409963-85409756 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 89, 22 |
| Conread position: | 323-543 |
| Cow position: | chr1:87915059-87914841 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 324-572 |
| Cow position: | chr1:70065704-70065949 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 343-572 |
| Cow position: | chr1:84152418-84152645 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 348-542 |
| Cow position: | chr1:88960393-88960589 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 365-572 |
| Cow position: | chr1:74713394-74713604 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 12, 116 |
| Conread position: | 381-526 |
| Cow position: | chr1:58003701-58003846 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 31 |
| Conread position: | 385-529 |
| Cow position: | chr1:72641682-72641539 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 401-572 |
| Cow position: | chr1:40161191-40161363 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 151 |
| Conread position: | 401-572 |
| Cow position: | chr1:40164217-40164389 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 151 |
| Conread position: | 402-572 |
| Cow position: | chr1:40223058-40222890 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 150, 141 |
| Conread position: | 403-572 |
| Cow position: | chr1:39244598-39244432 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 6, 22 |
| Conread position: | 413-535 |
| Cow position: | chr1:26831743-26831865 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 413-572 |
| Cow position: | chr1:63133606-63133771 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 421-571 |
| Cow position: | chr1:76780458-76780308 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 436-570 |
| Cow position: | chr1:61241760-61241889 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 438-572 |
| Cow position: | chr1:11879153-11879026 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.