Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               3-270
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               105, 49
               

               Conread position:
               3-377
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               110, 50
               

               Conread position:
               3-502
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 121
               

               Conread position:
               3-566
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 51
               

               Conread position:
               3-570
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               4-440
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               51, 60
               

               Conread position:
               5-212
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               132, 49
               

               Conread position:
               5-360
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               5-375
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               5-441
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               310
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               5-508
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               5-572
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 36
               

               Conread position:
               6-519
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               12-530
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 236
               

               Conread position:
               14-170
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               19-174
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               19-376
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               20-318
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               35, 44
               

               Conread position:
               20-376
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               206, 39
               

               Conread position:
               20-442
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               277
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               35, 42
               

               Conread position:
               20-443
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               93, 35
               

               Conread position:
               70-379
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 43
               

               Conread position:
               71-377
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 295
               

               Conread position:
               72-341
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               37, 67
               

               Conread position:
               75-379
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               149, 38
               

               Conread position:
               108-572
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               141-376
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               160-571
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 46
               

               Conread position:
               164-519
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 146
               

               Conread position:
               165-527
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               66, 101
               

               Conread position:
               167-526
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               40, 225
               

               Conread position:
               168-516
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               169-460
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 180
               

               Conread position:
               171-552
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               273
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               58, 86
               

               Conread position:
               171-571
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               171-572
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 130
               

               Conread position:
               175-477
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               56, 174
               

               Conread position:
               180-571
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 29
               

               Conread position:
               181-508
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 149
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               50, 141
               

               Conread position:
               181-534
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               50, 88
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               182-488
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               52, 93
               

               Conread position:
               183-572
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 178
               

               Conread position:
               189-566
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               11, 154
               

               Conread position:
               191-505
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               145, 35
               

               Conread position:
               191-548
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 55
               

               Conread position:
               192-572
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               281
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               193-509
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               38, 217
               

               Conread position:
               193-527
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 247
               

               Conread position:
               196-542
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               199-517
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 131
               

               Conread position:
               200-539
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               227-522
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               40, 93
               

               Conread position:
               252-532
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               253-566
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 162
               

               Conread position:
               255-566
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               259-506
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               292-505
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 175
               

               Conread position:
               308-567
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 101
               

               Conread position:
               315-540
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               334-572
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               344-570
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               348-572
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               398-570
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               401-572
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               145
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               412-556
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               412-556
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               412-572
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               422-571
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               427-571
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               435-572
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               443-572
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 0
               
Show alignments to all cow chromosomes.