Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               1-461
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               315
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               113, 18
               

               Conread position:
               3-270
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               108, 15
               

               Conread position:
               3-480
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 47
               

               Conread position:
               3-567
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 59
               

               Conread position:
               5-458
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               312
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               7-500
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 57
               

               Conread position:
               9-527
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               360
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               40, 55
               

               Conread position:
               12-356
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               100, 41
               

               Conread position:
               15-379
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               15-458
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               15-508
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               333
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               40, 46
               

               Conread position:
               20-349
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               31-567
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               60-316
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               61-443
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               264
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               71-331
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               71-345
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               41, 144
               

               Conread position:
               71-422
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 104
               

               Conread position:
               129-572
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               325
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               141-489
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               117, 84
               

               Conread position:
               142-508
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 104
               

               Conread position:
               148-572
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 44
               

               Conread position:
               158-508
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               73, 41
               

               Conread position:
               162-441
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               167-443
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               168-543
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               168-547
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 332
               

               Conread position:
               170-471
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               172-532
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               172-534
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               174-531
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               174-533
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               174-540
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 163
               

               Conread position:
               174-572
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 32
               

               Conread position:
               174-572
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               176-371
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 151
               

               Conread position:
               176-507
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 97
               

               Conread position:
               176-508
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               55, 167
               

               Conread position:
               176-543
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 168
               

               Conread position:
               176-562
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               55, 82
               

               Conread position:
               176-566
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               176-572
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 208
               

               Conread position:
               181-370
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 163
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               181-566
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               166, 48
               

               Conread position:
               182-504
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               26, 149
               

               Conread position:
               182-519
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               49, 93
               

               Conread position:
               182-539
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               182-551
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               265
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               52, 206
               

               Conread position:
               182-566
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               182-568
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               182-572
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 98
               

               Conread position:
               182-572
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               266
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               52, 108
               

               Conread position:
               183-532
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               106, 51
               

               Conread position:
               183-572
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               271
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               187, 32
               

               Conread position:
               183-572
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 6
               

               Conread position:
               184-519
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               184-523
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               49, 225
               

               Conread position:
               184-572
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               184-572
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 59
               

               Conread position:
               185-490
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               45, 24
               

               Conread position:
               185-572
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 142
               

               Conread position:
               187-571
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 19
               

               Conread position:
               188-532
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               43, 91
               

               Conread position:
               189-488
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               18, 272
               

               Conread position:
               189-568
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 243
               

               Conread position:
               191-572
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 156
               

               Conread position:
               199-527
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 189
               

               Conread position:
               199-572
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               215-572
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               19, 128
               

               Conread position:
               225-572
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               227-497
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               88, 65
               

               Conread position:
               228-566
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               44, 109
               

               Conread position:
               244-534
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 142
               

               Conread position:
               261-572
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               116, 77
               

               Conread position:
               269-510
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 80
               

               Conread position:
               272-515
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               292-570
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               308-528
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               70, 12
               

               Conread position:
               315-535
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 90
               

               Conread position:
               379-572
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               384-543
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 114
               

               Conread position:
               393-571
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               400-572
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               403-572
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               6, 141
               

               Conread position:
               407-543
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               407-572
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               411-572
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               421-572
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               427-572
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               125, 37
               

               Conread position:
               454-571
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               93, 0
               
Show alignments to all cow chromosomes.