Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 51
               

               Conread position:
               5-370
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 69
               

               Conread position:
               5-443
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               317
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               6-527
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 34
               

               Conread position:
               19-438
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               289
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               184, 29
               

               Conread position:
               21-432
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 34
               

               Conread position:
               71-438
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 135
               

               Conread position:
               73-562
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               330
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               41, 79
               

               Conread position:
               160-566
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               41, 208
               

               Conread position:
               167-514
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               49, 155
               

               Conread position:
               170-376
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               58, 47
               

               Conread position:
               172-572
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 5
               

               Conread position:
               176-509
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               33, 87
               

               Conread position:
               179-529
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 105
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 53
               

               Conread position:
               183-568
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               185-443
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               186-523
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 89
               

               Conread position:
               191-572
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               211, 43
               

               Conread position:
               211-566
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 209
               

               Conread position:
               216-545
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               44, 276
               

               Conread position:
               247-458
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               252-572
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               97, 157
               

               Conread position:
               261-543
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               261-572
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               269-507
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               81, 164
               

               Conread position:
               293-571
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               91, 12
               

               Conread position:
               311-572
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 135
               

               Conread position:
               315-567
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               325-572
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 57
               

               Conread position:
               355-572
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               370-572
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               376-570
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               399-572
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               400-543
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               401-572
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               404-572
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               412-568
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.