Cow genome map

Conread name: rpigcf0_000927.y1

Conread position: 3-272
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 75, 51

Conread position: 3-565
Cow position:
Alignm length: 576
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 63

Conread position: 5-136
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 59

Conread position: 5-369
Cow position:
Alignm length: 371
Alignm identity: 251
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 59

Conread position: 5-375
Cow position:
Alignm length: 384
Alignm identity: 255
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 9

Conread position: 12-504
Cow position:
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 14-441
Cow position:
Alignm length: 446
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 19-545
Cow position:
Alignm length: 542
Alignm identity: 358
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 45

Conread position: 21-372
Cow position:
Alignm length: 360
Alignm identity: 236
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 43

Conread position: 61-543
Cow position:
Alignm length: 497
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 86

Conread position: 64-351
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 76

Conread position: 71-405
Cow position:
Alignm length: 343
Alignm identity: 231
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 56

Conread position: 71-516
Cow position:
Alignm length: 460
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 52

Conread position: 72-527
Cow position:
Alignm length: 484
Alignm identity: 324
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 106

Conread position: 94-376
Cow position:
Alignm length: 288
Alignm identity: 189
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 45

Conread position: 137-534
Cow position:
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 190

Conread position: 137-567
Cow position:
Alignm length: 438
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 98

Conread position: 146-543
Cow position:
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 33

Conread position: 158-520
Cow position:
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 67

Conread position: 160-556
Cow position:
Alignm length: 410
Alignm identity: 264
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 67, 112

Conread position: 163-571
Cow position:
Alignm length: 411
Alignm identity: 270
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 184, 43

Conread position: 165-508
Cow position:
Alignm length: 351
Alignm identity: 229
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 66, 41

Conread position: 171-391
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 176

Conread position: 171-529
Cow position:
Alignm length: 369
Alignm identity: 240
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 157

Conread position: 172-508
Cow position:
Alignm length: 349
Alignm identity: 237
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 156

Conread position: 172-543
Cow position:
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 37

Conread position: 172-572
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 34

Conread position: 172-572
Cow position:
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 122

Conread position: 172-572
Cow position:
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 34

Conread position: 174-572
Cow position:
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 157

Conread position: 176-508
Cow position:
Alignm length: 351
Alignm identity: 244
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 40

Conread position: 176-572
Cow position:
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 30

Conread position: 176-572
Cow position:
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 377

Conread position: 181-508
Cow position:
Alignm length: 336
Alignm identity: 229
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 49

Conread position: 181-511
Cow position:
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 25

Conread position: 181-571
Cow position:
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 97

Conread position: 181-572
Cow position:
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 25

Conread position: 182-507
Cow position:
Alignm length: 337
Alignm identity: 226
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 9

Conread position: 182-532
Cow position:
Alignm length: 360
Alignm identity: 248
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 31

Conread position: 182-536
Cow position:
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 65

Conread position: 182-559
Cow position:
Alignm length: 391
Alignm identity: 265
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 160

Conread position: 182-566
Cow position:
Alignm length: 395
Alignm identity: 268
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 46, 7

Conread position: 183-465
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 186-376
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 164

Conread position: 192-568
Cow position:
Alignm length: 389
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 136

Conread position: 193-555
Cow position:
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 130

Conread position: 207-506
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 33

Conread position: 210-431
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 126

Conread position: 220-571
Cow position:
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 85

Conread position: 243-455
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 44

Conread position: 245-526
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 80

Conread position: 256-572
Cow position:
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 70

Conread position: 296-511
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 40

Conread position: 313-507
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 83

Conread position: 315-572
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 26

Conread position: 348-572
Cow position:
Alignm length: 228
Alignm identity: 174
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 9

Conread position: 370-571
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 403-513
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 403-543
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 405-572
Cow position:
Alignm length: 168
Alignm identity: 136
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 138, 0

Show alignments to all cow chromosomes.