Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               1-376
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               1-377
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               112, 53
               

               Conread position:
               3-135
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               3-269
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               208, 43
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               111, 50
               

               Conread position:
               3-572
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               380
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               111, 56
               

               Conread position:
               5-319
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               5-379
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               12-538
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 12
               

               Conread position:
               14-167
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               8, 51
               

               Conread position:
               14-510
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               14-534
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               367
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               14-566
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 36
               

               Conread position:
               15-326
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               99, 15
               

               Conread position:
               15-334
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               211, 45
               

               Conread position:
               15-351
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               15-520
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               19-333
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               91, 8
               

               Conread position:
               20-443
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               298
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               35, 44
               

               Conread position:
               29-570
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 23
               

               Conread position:
               72-204
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               74-527
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               41, 65
               

               Conread position:
               106-539
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 316
               

               Conread position:
               121-508
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 199
               

               Conread position:
               125-543
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               14, 186
               

               Conread position:
               142-572
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 67
               

               Conread position:
               148-505
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               256
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               83, 95
               

               Conread position:
               159-571
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 264
               

               Conread position:
               164-528
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 160
               

               Conread position:
               165-572
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               165-572
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               168-571
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               169-376
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 181
               

               Conread position:
               170-510
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               172-572
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 34
               

               Conread position:
               172-572
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               174-534
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 117
               

               Conread position:
               175-449
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               52, 153
               

               Conread position:
               175-572
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 49
               

               Conread position:
               176-516
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 58
               

               Conread position:
               176-572
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               31, 68
               

               Conread position:
               179-505
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               181-536
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               182-521
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               85, 110
               

               Conread position:
               182-567
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               182-572
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               184-539
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               5, 23
               

               Conread position:
               186-572
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               191-572
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 124
               

               Conread position:
               191-572
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 127
               

               Conread position:
               193-572
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               212-569
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 139
               

               Conread position:
               223-524
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               113, 7
               

               Conread position:
               250-565
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 51
               

               Conread position:
               255-506
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               123, 93
               

               Conread position:
               266-521
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               282-572
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 5
               

               Conread position:
               314-572
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               321-566
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               12, 83
               

               Conread position:
               327-566
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               403-571
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               407-565
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               412-562
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               412-571
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               413-572
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 111
               

               Conread position:
               422-572
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               82, 124
               

               Conread position:
               424-521
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               427-572
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 0
               
Show alignments to all cow chromosomes.