Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               3-178
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               111, 36
               

               Conread position:
               3-319
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               110, 38
               

               Conread position:
               3-396
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               3-519
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               336
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               228, 47
               

               Conread position:
               5-158
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               5-164
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               5-504
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               6-508
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 58
               

               Conread position:
               12-469
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 52
               

               Conread position:
               12-500
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 43
               

               Conread position:
               12-571
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               385
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               216, 41
               

               Conread position:
               14-178
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               14-572
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 37
               

               Conread position:
               20-458
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               90, 7
               

               Conread position:
               30-509
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               316
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               56-458
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 138
               

               Conread position:
               71-376
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               71-516
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               41, 79
               

               Conread position:
               71-527
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               317
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               42, 214
               

               Conread position:
               131-572
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 49
               

               Conread position:
               137-551
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               283
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               141-568
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 125
               

               Conread position:
               148-519
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 61
               

               Conread position:
               152-567
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               152-572
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 56
               

               Conread position:
               162-572
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               167-456
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               60, 108
               

               Conread position:
               167-508
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 39
               

               Conread position:
               169-572
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 40
               

               Conread position:
               170-514
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               30, 174
               

               Conread position:
               172-527
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 186
               

               Conread position:
               172-543
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               120, 77
               

               Conread position:
               172-566
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               174-530
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 122
               

               Conread position:
               174-566
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 360
               

               Conread position:
               176-494
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               176-556
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               176-566
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               277
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               55, 30
               

               Conread position:
               177-458
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               51, 211
               

               Conread position:
               181-503
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               27, 130
               

               Conread position:
               181-504
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               49, 301
               

               Conread position:
               181-543
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 177
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               182-572
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 207
               

               Conread position:
               183-458
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 129
               

               Conread position:
               183-572
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 202
               

               Conread position:
               188-520
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               46, 144
               

               Conread position:
               191-485
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               191-540
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               47, 57
               

               Conread position:
               191-543
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 196
               

               Conread position:
               194-572
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 135
               

               Conread position:
               209-515
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               25, 114
               

               Conread position:
               210-532
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               227-467
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               230-566
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               42, 88
               

               Conread position:
               245-572
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 176
               

               Conread position:
               246-442
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 80
               

               Conread position:
               247-572
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               248-526
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               54, 123
               

               Conread position:
               252-527
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               20, 235
               

               Conread position:
               255-559
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 215
               

               Conread position:
               272-523
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               91, 66
               

               Conread position:
               292-572
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 114
               

               Conread position:
               296-524
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 41
               

               Conread position:
               305-572
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               315-572
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               48, 39
               

               Conread position:
               321-572
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               331-543
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               19, 154
               

               Conread position:
               343-567
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 77
               

               Conread position:
               345-570
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               32, 169
               

               Conread position:
               380-526
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               402-571
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               11, 106
               

               Conread position:
               410-566
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               412-543
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               417-572
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               425-572
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               431-572
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               447-572
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               464-572
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               79, 0
               
Show alignments to all cow chromosomes.