Cow genome map
Conread name: | rpigcf0_000927.y1 |
Conread position: | 3-498 |
Cow position: | chr17:35180443-35180934 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 11 |
Conread position: | 3-572 |
Cow position: | chr17:20209193-20208646 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 24 |
Conread position: | 5-136 |
Cow position: | chr17:35232369-35232234 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 103 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 5-502 |
Cow position: | chr17:28359471-28359955 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 59 |
Conread position: | 5-508 |
Cow position: | chr17:8280088-8279588 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 60 |
Conread position: | 12-319 |
Cow position: | chr17:6843804-6844105 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 212 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 236, 41 |
Conread position: | 12-410 |
Cow position: | chr17:24608468-24608869 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 20 |
Conread position: | 12-542 |
Cow position: | chr17:7560034-7559505 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 51 |
Conread position: | 20-462 |
Cow position: | chr17:36790762-36791208 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 316 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 35, 44 |
Conread position: | 20-505 |
Cow position: | chr17:20215791-20216283 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 30 |
Conread position: | 21-376 |
Cow position: | chr17:3269965-3270299 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 236 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 186, 34 |
Conread position: | 71-334 |
Cow position: | chr17:32456700-32456441 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 191 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 160, 44 |
Conread position: | 71-388 |
Cow position: | chr17:4677130-4677472 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 234 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 37, 204 |
Conread position: | 111-370 |
Cow position: | chr17:15333996-15333733 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 198 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 56, 88 |
Conread position: | 137-533 |
Cow position: | chr17:19236941-19237334 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 76 |
Conread position: | 160-527 |
Cow position: | chr17:23205801-23206156 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 263 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 71, 151 |
Conread position: | 166-534 |
Cow position: | chr17:144400-144037 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 259 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 61, 43 |
Conread position: | 169-526 |
Cow position: | chr17:30204430-30204796 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 286 |
Conread position: | 172-447 |
Cow position: | chr17:13236948-13236664 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 200 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 59, 233 |
Conread position: | 174-523 |
Cow position: | chr17:20653115-20652777 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 252 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 72, 63 |
Conread position: | 174-534 |
Cow position: | chr17:19891395-19891768 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 259 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 57, 205 |
Conread position: | 174-566 |
Cow position: | chr17:7251822-7252211 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 281 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 32, 61 |
Conread position: | 176-543 |
Cow position: | chr17:15985138-15985503 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 30 |
Conread position: | 181-519 |
Cow position: | chr17:11171583-11171922 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 241 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 46, 32 |
Conread position: | 182-572 |
Cow position: | chr17:15450143-15450538 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 232 |
Conread position: | 183-571 |
Cow position: | chr17:11374900-11374517 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 23 |
Conread position: | 187-572 |
Cow position: | chr17:30329487-30329853 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 139 |
Conread position: | 191-550 |
Cow position: | chr17:14231285-14230927 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 7 |
Conread position: | 199-510 |
Cow position: | chr17:15577571-15577881 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 210 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 14, 49 |
Conread position: | 210-538 |
Cow position: | chr17:28847852-28847512 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 118 |
Conread position: | 211-505 |
Cow position: | chr17:27622793-27622502 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 200 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 20, 47 |
Conread position: | 224-502 |
Cow position: | chr17:13495642-13495929 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 160 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 226-497 |
Cow position: | chr17:37778782-37778512 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 186 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 64, 46 |
Conread position: | 239-521 |
Cow position: | chr17:21812300-21812020 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 191 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 33, 13 |
Conread position: | 245-530 |
Cow position: | chr17:12554844-12554568 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 77 |
Conread position: | 324-568 |
Cow position: | chr17:933372-933616 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 174 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 66, 173 |
Conread position: | 350-572 |
Cow position: | chr17:1310297-1310075 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 171 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 31, 48 |
Conread position: | 356-566 |
Cow position: | chr17:26532800-26533008 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 148 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 21, 54 |
Conread position: | 398-572 |
Cow position: | chr17:4440301-4440134 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 13, 30 |
Conread position: | 407-572 |
Cow position: | chr17:701423-701584 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 133 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 427-572 |
Cow position: | chr17:8035756-8035899 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 430-571 |
Cow position: | chr17:13236657-13236520 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 432-572 |
Cow position: | chr17:24608862-24608999 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 104, 112 |
Show alignments to all cow chromosomes.