Cow genome map

Conread name: rpigcf0_000927.y1

Conread position: 3-498
Cow position: chr17:35180443-35180934 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 11

Conread position: 3-572
Cow position: chr17:20209193-20208646 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 24

Conread position: 5-136
Cow position: chr17:35232369-35232234 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 5-502
Cow position: chr17:28359471-28359955 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 5-508
Cow position: chr17:8280088-8279588 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 60

Conread position: 12-319
Cow position: chr17:6843804-6844105 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 236, 41

Conread position: 12-410
Cow position: chr17:24608468-24608869 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 20

Conread position: 12-542
Cow position: chr17:7560034-7559505 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 51

Conread position: 20-462
Cow position: chr17:36790762-36791208 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 316
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 44

Conread position: 20-505
Cow position: chr17:20215791-20216283 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 30

Conread position: 21-376
Cow position: chr17:3269965-3270299 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 186, 34

Conread position: 71-334
Cow position: chr17:32456700-32456441 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 160, 44

Conread position: 71-388
Cow position: chr17:4677130-4677472 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 204

Conread position: 111-370
Cow position: chr17:15333996-15333733 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 56, 88

Conread position: 137-533
Cow position: chr17:19236941-19237334 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 160-527
Cow position: chr17:23205801-23206156 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 151

Conread position: 166-534
Cow position: chr17:144400-144037 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 43

Conread position: 169-526
Cow position: chr17:30204430-30204796 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 286

Conread position: 172-447
Cow position: chr17:13236948-13236664 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 233

Conread position: 174-523
Cow position: chr17:20653115-20652777 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 72, 63

Conread position: 174-534
Cow position: chr17:19891395-19891768 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 57, 205

Conread position: 174-566
Cow position: chr17:7251822-7252211 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 61

Conread position: 176-543
Cow position: chr17:15985138-15985503 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 30

Conread position: 181-519
Cow position: chr17:11171583-11171922 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 32

Conread position: 182-572
Cow position: chr17:15450143-15450538 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 232

Conread position: 183-571
Cow position: chr17:11374900-11374517 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 187-572
Cow position: chr17:30329487-30329853 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 139

Conread position: 191-550
Cow position: chr17:14231285-14230927 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 7

Conread position: 199-510
Cow position: chr17:15577571-15577881 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 49

Conread position: 210-538
Cow position: chr17:28847852-28847512 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 118

Conread position: 211-505
Cow position: chr17:27622793-27622502 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 47

Conread position: 224-502
Cow position: chr17:13495642-13495929 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 226-497
Cow position: chr17:37778782-37778512 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 46

Conread position: 239-521
Cow position: chr17:21812300-21812020 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 13

Conread position: 245-530
Cow position: chr17:12554844-12554568 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 324-568
Cow position: chr17:933372-933616 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 173

Conread position: 350-572
Cow position: chr17:1310297-1310075 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 31, 48

Conread position: 356-566
Cow position: chr17:26532800-26533008 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 54

Conread position: 398-572
Cow position: chr17:4440301-4440134 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 30

Conread position: 407-572
Cow position: chr17:701423-701584 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 427-572
Cow position: chr17:8035756-8035899 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 430-571
Cow position: chr17:13236657-13236520 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 432-572
Cow position: chr17:24608862-24608999 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 112

Show alignments to all cow chromosomes.