Cow genome map

Conread name: rpigcf0_000927.y1

Conread position: 1-441
Cow position:
Alignm length: 452
Alignm identity: 295
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 65

Conread position: 3-405
Cow position:
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 9

Conread position: 3-572
Cow position:
Alignm length: 601
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 50

Conread position: 4-540
Cow position:
Alignm length: 555
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 46

Conread position: 5-376
Cow position:
Alignm length: 381
Alignm identity: 258
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 50, 59

Conread position: 14-521
Cow position:
Alignm length: 522
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 16-572
Cow position:
Alignm length: 592
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 46

Conread position: 19-539
Cow position:
Alignm length: 544
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 22

Conread position: 20-540
Cow position:
Alignm length: 542
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 27

Conread position: 61-374
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 11

Conread position: 71-224
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 68

Conread position: 71-324
Cow position:
Alignm length: 264
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 107

Conread position: 71-379
Cow position:
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 287

Conread position: 71-521
Cow position:
Alignm length: 464
Alignm identity: 305
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 42, 71

Conread position: 72-471
Cow position:
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 264

Conread position: 108-572
Cow position:
Alignm length: 496
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 137-479
Cow position:
Alignm length: 355
Alignm identity: 243
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 110

Conread position: 137-506
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 218

Conread position: 168-372
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 59, 181

Conread position: 168-458
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 77

Conread position: 168-509
Cow position:
Alignm length: 349
Alignm identity: 234
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 110

Conread position: 170-507
Cow position:
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 36

Conread position: 170-532
Cow position:
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 44

Conread position: 172-561
Cow position:
Alignm length: 393
Alignm identity: 266
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 85

Conread position: 174-571
Cow position:
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 174-572
Cow position:
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 97

Conread position: 176-439
Cow position:
Alignm length: 267
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 174, 51

Conread position: 176-517
Cow position:
Alignm length: 351
Alignm identity: 241
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 30

Conread position: 181-497
Cow position:
Alignm length: 324
Alignm identity: 233
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 109

Conread position: 182-506
Cow position:
Alignm length: 335
Alignm identity: 226
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 24

Conread position: 182-572
Cow position:
Alignm length: 401
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 36

Conread position: 183-480
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 43, 21

Conread position: 183-531
Cow position:
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 304

Conread position: 183-543
Cow position:
Alignm length: 372
Alignm identity: 257
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 7, 147

Conread position: 188-522
Cow position:
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 74

Conread position: 191-515
Cow position:
Alignm length: 336
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 18

Conread position: 200-566
Cow position:
Alignm length: 372
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 34

Conread position: 210-572
Cow position:
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 130

Conread position: 227-507
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 118

Conread position: 227-540
Cow position:
Alignm length: 320
Alignm identity: 210
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 154, 55

Conread position: 248-556
Cow position:
Alignm length: 314
Alignm identity: 218
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 95

Conread position: 279-543
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 21

Conread position: 314-572
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 40, 63

Conread position: 315-572
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 233

Conread position: 356-572
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 114, 52

Conread position: 360-527
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 44

Conread position: 361-560
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 33

Conread position: 399-522
Cow position:
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 399-572
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 73

Show alignments to all cow chromosomes.