Cow genome map
Conread name: | rpigcf0_000927.y1 |
Conread position: | 1-351 |
Cow position: | chr19:23399197-23398852 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 262 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 110, 48 |
Conread position: | 1-530 |
Cow position: | chr19:19241660-19242185 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 58 |
Conread position: | 3-135 |
Cow position: | chr19:33593598-33593469 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 92, 47 |
Conread position: | 3-148 |
Cow position: | chr19:38983596-38983737 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 50, 61 |
Conread position: | 3-166 |
Cow position: | chr19:38545287-38545446 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 110, 51 |
Conread position: | 3-248 |
Cow position: | chr19:14104019-14104252 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 176 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 46, 22 |
Conread position: | 3-372 |
Cow position: | chr19:38396699-38396347 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 257 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 111, 50 |
Conread position: | 5-229 |
Cow position: | chr19:15495215-15494983 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 172 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 108, 25 |
Conread position: | 5-319 |
Cow position: | chr19:34985999-34986319 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 239 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 105, 54 |
Conread position: | 5-505 |
Cow position: | chr19:4502789-4503285 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 328 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 220, 59 |
Conread position: | 5-508 |
Cow position: | chr19:5649096-5648596 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 51 |
Conread position: | 5-568 |
Cow position: | chr19:42706782-42706246 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 44 |
Conread position: | 6-325 |
Cow position: | chr19:55647208-55646902 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 225 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 225, 23 |
Conread position: | 15-270 |
Cow position: | chr19:46873097-46872850 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 182 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 19, 50 |
Conread position: | 16-524 |
Cow position: | chr19:43417979-43418491 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 362 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 34, 50 |
Conread position: | 19-334 |
Cow position: | chr19:22423406-22423090 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 225 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 36, 45 |
Conread position: | 19-527 |
Cow position: | chr19:36844826-36845335 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 338 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 91, 35 |
Conread position: | 20-319 |
Cow position: | chr19:52305318-52305028 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 34 |
Conread position: | 21-508 |
Cow position: | chr19:19925037-19924534 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 20 |
Conread position: | 71-324 |
Cow position: | chr19:40250644-40250895 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 184 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 155, 42 |
Conread position: | 71-333 |
Cow position: | chr19:55210830-55210576 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 190 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 43, 69 |
Conread position: | 71-351 |
Cow position: | chr19:42215726-42216015 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 198 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 42, 164 |
Conread position: | 71-519 |
Cow position: | chr19:43733387-43733811 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 301 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 42, 68 |
Conread position: | 71-527 |
Cow position: | chr19:19246426-19246860 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 310 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 44, 58 |
Conread position: | 80-325 |
Cow position: | chr19:28912507-28912765 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 183 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 89-566 |
Cow position: | chr19:42092571-42092097 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 331 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 25, 247 |
Conread position: | 155-572 |
Cow position: | chr19:33285556-33285173 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 281 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 158-485 |
Cow position: | chr19:47109755-47110085 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 239 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 73, 51 |
Conread position: | 165-572 |
Cow position: | chr19:426520-426139 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 26 |
Conread position: | 167-556 |
Cow position: | chr19:3084486-3084092 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 39 |
Conread position: | 168-508 |
Cow position: | chr19:36461804-36461461 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 40 |
Conread position: | 168-526 |
Cow position: | chr19:15711773-15712109 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 237 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 237, 41 |
Conread position: | 168-543 |
Cow position: | chr19:42465766-42465404 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 175 |
Conread position: | 170-542 |
Cow position: | chr19:38545721-38546082 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 247 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 13, 40 |
Conread position: | 170-566 |
Cow position: | chr19:31396166-31395775 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 36 |
Conread position: | 172-566 |
Cow position: | chr19:25048876-25048504 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 277 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 39, 130 |
Conread position: | 172-572 |
Cow position: | chr19:20699815-20700211 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 155 |
Conread position: | 174-572 |
Cow position: | chr19:40714888-40715269 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 280 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 57, 35 |
Conread position: | 176-572 |
Cow position: | chr19:30746132-30746537 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 30 |
Conread position: | 181-504 |
Cow position: | chr19:35782397-35782078 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 233 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 46, 34 |
Conread position: | 181-506 |
Cow position: | chr19:4599818-4600129 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 68 |
Conread position: | 184-572 |
Cow position: | chr19:36478633-36479025 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 143 |
Conread position: | 193-572 |
Cow position: | chr19:4609619-4609989 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 145 |
Conread position: | 197-448 |
Cow position: | chr19:30276697-30276942 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 185 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 34, 61 |
Conread position: | 197-522 |
Cow position: | chr19:30052249-30051912 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 78 |
Conread position: | 206-562 |
Cow position: | chr19:28326669-28326313 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 254 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 16, 50 |
Conread position: | 210-572 |
Cow position: | chr19:28800361-28800008 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 120 |
Conread position: | 230-521 |
Cow position: | chr19:20292300-20292012 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 193 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 137, 0 |
Conread position: | 248-572 |
Cow position: | chr19:3081902-3082208 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 241 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 21, 27 |
Conread position: | 252-570 |
Cow position: | chr19:30452965-30452641 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 61 |
Conread position: | 292-572 |
Cow position: | chr19:3585370-3585098 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 205 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 92, 45 |
Conread position: | 325-572 |
Cow position: | chr19:14534765-14534518 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 183 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 7, 123 |
Conread position: | 346-571 |
Cow position: | chr19:39250174-39250393 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 36, 7 |
Conread position: | 385-566 |
Cow position: | chr19:31287223-31287048 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 395-511 |
Cow position: | chr19:15039736-15039619 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 401-568 |
Cow position: | chr19:22993901-22994067 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 121 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 19, 143 |
Conread position: | 421-572 |
Cow position: | chr19:38396080-38395933 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 122 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.