Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               110, 48
               

               Conread position:
               1-530
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 58
               

               Conread position:
               3-135
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               92, 47
               

               Conread position:
               3-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               110, 51
               

               Conread position:
               3-248
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               111, 50
               

               Conread position:
               5-229
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               108, 25
               

               Conread position:
               5-319
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               5-505
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               328
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               220, 59
               

               Conread position:
               5-508
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 51
               

               Conread position:
               5-568
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 44
               

               Conread position:
               6-325
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               225, 23
               

               Conread position:
               15-270
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               16-524
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               362
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               19-334
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               19-527
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               338
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               91, 35
               

               Conread position:
               20-319
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 34
               

               Conread position:
               21-508
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               71-324
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               155, 42
               

               Conread position:
               71-333
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               43, 69
               

               Conread position:
               71-351
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 164
               

               Conread position:
               71-519
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               42, 68
               

               Conread position:
               71-527
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               44, 58
               

               Conread position:
               80-325
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               89-566
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               331
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 247
               

               Conread position:
               155-572
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               158-485
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               73, 51
               

               Conread position:
               165-572
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 26
               

               Conread position:
               167-556
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               168-508
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               168-526
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               237, 41
               

               Conread position:
               168-543
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 175
               

               Conread position:
               170-542
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               170-566
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 36
               

               Conread position:
               172-566
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               277
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               39, 130
               

               Conread position:
               172-572
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 155
               

               Conread position:
               174-572
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               57, 35
               

               Conread position:
               176-572
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 30
               

               Conread position:
               181-504
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               181-506
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               184-572
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 143
               

               Conread position:
               193-572
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 145
               

               Conread position:
               197-448
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               34, 61
               

               Conread position:
               197-522
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               206-562
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               210-572
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 120
               

               Conread position:
               230-521
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               248-572
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               252-570
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               292-572
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               92, 45
               

               Conread position:
               325-572
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               7, 123
               

               Conread position:
               346-571
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               385-566
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               395-511
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               401-568
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               421-572
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.