Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               3-272
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 50
               

               Conread position:
               3-458
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               320
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               3-566
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 56
               

               Conread position:
               3-568
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               4-572
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 50
               

               Conread position:
               5-333
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               109, 54
               

               Conread position:
               5-379
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               5-513
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               5-521
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               343
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               105, 46
               

               Conread position:
               5-527
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               350
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               6-332
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               6-420
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               12-178
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               12-458
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               305
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               188, 47
               

               Conread position:
               19-300
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 47
               

               Conread position:
               20-369
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               54-410
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               59, 177
               

               Conread position:
               61-525
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               64-529
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               71-379
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               71-458
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               154, 36
               

               Conread position:
               71-458
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               82-376
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               137-527
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               45, 98
               

               Conread position:
               158-534
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               114, 57
               

               Conread position:
               164-511
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 61
               

               Conread position:
               164-566
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               67, 23
               

               Conread position:
               166-572
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               168-503
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               66, 181
               

               Conread position:
               169-372
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               62, 180
               

               Conread position:
               172-507
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 90
               

               Conread position:
               172-572
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               282
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               29, 162
               

               Conread position:
               173-572
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 59
               

               Conread position:
               174-481
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 138
               

               Conread position:
               174-566
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 109
               

               Conread position:
               174-571
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 101
               

               Conread position:
               175-572
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 54
               

               Conread position:
               176-543
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 30
               

               Conread position:
               176-562
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 172
               

               Conread position:
               176-572
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               41, 47
               

               Conread position:
               176-572
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               180-572
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               285
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               51, 200
               

               Conread position:
               181-510
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               50, 244
               

               Conread position:
               181-515
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               181-534
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               181-539
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 143
               

               Conread position:
               181-543
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 159
               

               Conread position:
               181-543
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 25
               

               Conread position:
               181-566
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               91, 28
               

               Conread position:
               182-515
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               183-424
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               183-534
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               184-499
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 87
               

               Conread position:
               184-571
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               47, 33
               

               Conread position:
               185-572
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               188-525
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               12, 162
               

               Conread position:
               191-572
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 150
               

               Conread position:
               193-527
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               156, 13
               

               Conread position:
               195-505
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               195-513
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               26, 128
               

               Conread position:
               198-572
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               199-529
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               200-536
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 42
               

               Conread position:
               207-572
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 177
               

               Conread position:
               209-534
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               22, 301
               

               Conread position:
               225-507
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               24, 125
               

               Conread position:
               227-522
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               213, 58
               

               Conread position:
               228-556
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               113, 12
               

               Conread position:
               230-568
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               17, 311
               

               Conread position:
               244-527
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               5, 169
               

               Conread position:
               245-567
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 99
               

               Conread position:
               246-572
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               252-572
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               263-572
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               147, 76
               

               Conread position:
               269-556
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               15, 208
               

               Conread position:
               270-572
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               293-572
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 9
               

               Conread position:
               306-572
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               311-534
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 226
               

               Conread position:
               314-551
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 81
               

               Conread position:
               322-528
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               348-566
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 86
               

               Conread position:
               348-567
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               358-564
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               360-572
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               376-566
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               376-570
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               42, 133
               

               Conread position:
               380-572
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 139
               

               Conread position:
               395-572
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               89, 128
               

               Conread position:
               400-566
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 151
               

               Conread position:
               404-572
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               412-530
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               416-567
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               426-566
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               427-568
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               434-572
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               61, 0
               
Show alignments to all cow chromosomes.