Cow genome map

Conread name: rpigcf0_000927.y1

Conread position: 1-572
Cow position:
Alignm length: 586
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 49

Conread position: 3-324
Cow position:
Alignm length: 329
Alignm identity: 224
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 231, 47

Conread position: 4-572
Cow position:
Alignm length: 587
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 56

Conread position: 5-358
Cow position:
Alignm length: 364
Alignm identity: 254
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 50, 59

Conread position: 5-458
Cow position:
Alignm length: 459
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 58

Conread position: 5-535
Cow position:
Alignm length: 540
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 61

Conread position: 7-482
Cow position:
Alignm length: 485
Alignm identity: 329
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 48, 7

Conread position: 15-571
Cow position:
Alignm length: 563
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 44

Conread position: 19-534
Cow position:
Alignm length: 526
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 45

Conread position: 20-376
Cow position:
Alignm length: 367
Alignm identity: 257
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 44

Conread position: 20-379
Cow position:
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 122

Conread position: 27-521
Cow position:
Alignm length: 513
Alignm identity: 336
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 27, 37

Conread position: 61-315
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 42, 146

Conread position: 71-383
Cow position:
Alignm length: 325
Alignm identity: 211
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 63

Conread position: 73-527
Cow position:
Alignm length: 467
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 66

Conread position: 89-572
Cow position:
Alignm length: 501
Alignm identity: 342
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 16, 135

Conread position: 94-566
Cow position:
Alignm length: 506
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 292

Conread position: 137-520
Cow position:
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 102

Conread position: 154-484
Cow position:
Alignm length: 341
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 171

Conread position: 158-572
Cow position:
Alignm length: 424
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 393

Conread position: 165-376
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 41

Conread position: 166-514
Cow position:
Alignm length: 356
Alignm identity: 239
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 14

Conread position: 166-571
Cow position:
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 167-572
Cow position:
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 81

Conread position: 168-381
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 81, 63

Conread position: 168-571
Cow position:
Alignm length: 417
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 15

Conread position: 168-572
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 28

Conread position: 169-550
Cow position:
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 113

Conread position: 170-537
Cow position:
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 74

Conread position: 170-571
Cow position:
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 50

Conread position: 170-572
Cow position:
Alignm length: 413
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 187

Conread position: 172-534
Cow position:
Alignm length: 375
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 185

Conread position: 172-566
Cow position:
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 42

Conread position: 174-443
Cow position:
Alignm length: 278
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 81

Conread position: 180-510
Cow position:
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 19

Conread position: 181-508
Cow position:
Alignm length: 344
Alignm identity: 223
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 28

Conread position: 181-530
Cow position:
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 183-568
Cow position:
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 235

Conread position: 185-572
Cow position:
Alignm length: 397
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 222

Conread position: 189-530
Cow position:
Alignm length: 352
Alignm identity: 232
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 155

Conread position: 227-507
Cow position:
Alignm length: 287
Alignm identity: 197
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 9

Conread position: 236-545
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 239-572
Cow position:
Alignm length: 341
Alignm identity: 235
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 92

Conread position: 248-534
Cow position:
Alignm length: 301
Alignm identity: 201
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 102

Conread position: 252-533
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 154

Conread position: 254-572
Cow position:
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 54

Conread position: 255-572
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 14

Conread position: 264-572
Cow position:
Alignm length: 314
Alignm identity: 225
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 113, 80

Conread position: 369-572
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 400-567
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 403-536
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 59

Conread position: 404-570
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 90, 141

Conread position: 409-572
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 412-572
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 31

Conread position: 413-538
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 420-536
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 429-572
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 102, 0

Show alignments to all cow chromosomes.