Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               3-319
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 61
               

               Conread position:
               4-318
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               133, 49
               

               Conread position:
               5-221
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               108, 7
               

               Conread position:
               5-377
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               12-167
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               13-229
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               18-443
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               287
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               19-508
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               20-443
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 35
               

               Conread position:
               20-461
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               300
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               88, 39
               

               Conread position:
               29-566
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               61-196
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               74-571
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               343
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               40, 141
               

               Conread position:
               125-571
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               316
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               146-543
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 63
               

               Conread position:
               152-431
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               79, 57
               

               Conread position:
               159-534
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               162-572
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 37
               

               Conread position:
               165-534
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               165-566
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               73, 44
               

               Conread position:
               166-572
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               168-515
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               219, 26
               

               Conread position:
               168-571
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 95
               

               Conread position:
               170-526
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 37
               

               Conread position:
               170-526
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 150
               

               Conread position:
               171-494
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               53, 38
               

               Conread position:
               174-566
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               174-572
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 108
               

               Conread position:
               176-515
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               176-567
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 179
               

               Conread position:
               181-484
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               181-534
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               22, 142
               

               Conread position:
               181-542
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               181-566
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 111
               

               Conread position:
               181-570
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               47, 105
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 165
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 171
               

               Conread position:
               184-572
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 22
               

               Conread position:
               191-507
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               197-534
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 128
               

               Conread position:
               210-567
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 68
               

               Conread position:
               233-566
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 102
               

               Conread position:
               254-568
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               257-535
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               226
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               266-448
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               113, 55
               

               Conread position:
               266-525
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               84, 54
               

               Conread position:
               292-572
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 29
               

               Conread position:
               295-534
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               79, 108
               

               Conread position:
               318-539
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               337-545
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               44, 11
               

               Conread position:
               359-566
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               376-572
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               395-572
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               400-572
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               405-533
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               406-572
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               407-572
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               409-572
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               426-525
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               427-572
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               134, 45
               

               Conread position:
               436-572
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               84, 0
               
Show alignments to all cow chromosomes.