Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               1-445
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 52
               

               Conread position:
               3-404
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 47
               

               Conread position:
               3-524
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 60
               

               Conread position:
               3-541
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               4-539
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               356
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               227, 20
               

               Conread position:
               4-568
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 133
               

               Conread position:
               5-135
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               108, 57
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               108, 48
               

               Conread position:
               5-354
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               5-537
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 48
               

               Conread position:
               7-545
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               362
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               9-318
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               46, 55
               

               Conread position:
               11-178
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               102, 31
               

               Conread position:
               14-265
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               8, 51
               

               Conread position:
               20-322
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 35
               

               Conread position:
               20-530
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 44
               

               Conread position:
               20-534
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 44
               

               Conread position:
               61-370
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               49, 235
               

               Conread position:
               61-512
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               53, 179
               

               Conread position:
               64-313
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               70-317
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               71-371
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               71-403
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 71
               

               Conread position:
               71-503
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 132
               

               Conread position:
               117-443
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               130-572
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 199
               

               Conread position:
               140-456
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 143
               

               Conread position:
               143-508
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               146-570
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 67
               

               Conread position:
               158-532
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               164-540
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               66, 27
               

               Conread position:
               166-508
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               42, 244
               

               Conread position:
               172-572
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               174-405
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 116
               

               Conread position:
               174-527
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               176-372
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               176-542
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 180
               

               Conread position:
               177-543
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               141, 32
               

               Conread position:
               181-567
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               181-568
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               182-556
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 103
               

               Conread position:
               182-572
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               182-572
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 27
               

               Conread position:
               188-526
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               149, 46
               

               Conread position:
               191-485
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               191-571
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               280
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               196-427
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               35, 217
               

               Conread position:
               221-571
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               10, 104
               

               Conread position:
               222-566
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               235-572
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               36, 90
               

               Conread position:
               248-572
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               267-562
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               58, 12
               

               Conread position:
               274-558
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               52, 134
               

               Conread position:
               280-572
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               292-566
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               328-530
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               378-572
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               395-571
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               401-522
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               402-541
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               402-572
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               61, 119
               

               Conread position:
               414-566
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               430-571
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 0
               
Show alignments to all cow chromosomes.