Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               182, 50
               

               Conread position:
               3-497
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 35
               

               Conread position:
               3-550
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               4-558
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 50
               

               Conread position:
               5-187
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               5-507
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               348
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               106, 45
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               8-566
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 47
               

               Conread position:
               13-534
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               357
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               40, 53
               

               Conread position:
               14-441
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               272
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               132, 40
               

               Conread position:
               20-377
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 44
               

               Conread position:
               61-332
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 248
               

               Conread position:
               71-224
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 131
               

               Conread position:
               71-527
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               71-534
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               311
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               39, 283
               

               Conread position:
               159-532
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               72, 168
               

               Conread position:
               166-542
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               61, 47
               

               Conread position:
               167-572
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 45
               

               Conread position:
               168-478
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 248
               

               Conread position:
               169-527
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               63, 175
               

               Conread position:
               174-540
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 149
               

               Conread position:
               176-443
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               55, 92
               

               Conread position:
               176-572
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 23
               

               Conread position:
               178-534
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 80
               

               Conread position:
               181-514
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 128
               

               Conread position:
               181-519
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               181-521
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 114
               

               Conread position:
               181-539
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 210
               

               Conread position:
               181-568
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               281
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               91, 52
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               188-519
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               43, 238
               

               Conread position:
               188-568
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               189-467
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               195-568
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 128
               

               Conread position:
               202-527
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 130
               

               Conread position:
               230-562
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               42, 111
               

               Conread position:
               236-514
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               44, 87
               

               Conread position:
               245-572
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               27, 80
               

               Conread position:
               256-566
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               264-565
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               269-502
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               269-563
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               109, 30
               

               Conread position:
               271-572
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               83, 140
               

               Conread position:
               291-543
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               359-572
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               376-572
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               395-572
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               407-572
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               436-572
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               122, 10
               

               Conread position:
               443-572
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               454-572
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 90
               
Show alignments to all cow chromosomes.